; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS014946 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS014946
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationscaffold2:143104..144206
RNA-Seq ExpressionMS014946
SyntenyMS014946
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022151778.1 chlorophyll a-b binding protein 7, chloroplastic [Momordica charantia]4.1e-146100Show/hide
Query:  SSQKNGCPKACNFVTGKKLRLRKYTAAAVAPRSATVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGI
        SSQKNGCPKACNFVTGKKLRLRKYTAAAVAPRSATVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGI
Subjt:  SSQKNGCPKACNFVTGKKLRLRKYTAAAVAPRSATVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGI

Query:  FIPEFLTKIGILNTPSWYSAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTK
        FIPEFLTKIGILNTPSWYSAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTK
Subjt:  FIPEFLTKIGILNTPSWYSAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTK

Query:  EIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA
        EIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA
Subjt:  EIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA

XP_022945038.1 chlorophyll a-b binding protein 7, chloroplastic-like [Cucurbita moschata]1.6e-14297.54Show/hide
Query:  SSQKNGCPKACNFVTGKKLRLRKYTAAAVAPRSATVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGI
        SSQKNGCPKA NFVTGKKLRLRKYT   VAPRSA VCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGI
Subjt:  SSQKNGCPKACNFVTGKKLRLRKYTAAAVAPRSATVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGI

Query:  FIPEFLTKIGILNTPSWYSAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTK
        FIPEFLTKIGILNTPSWY+AGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTK
Subjt:  FIPEFLTKIGILNTPSWYSAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTK

Query:  EIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA
        EIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA
Subjt:  EIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA

XP_022957420.1 chlorophyll a-b binding protein 7, chloroplastic [Cucurbita moschata]4.7e-14296.72Show/hide
Query:  SSQKNGCPKACNFVTGKKLRLRKYTAAAVAPRSATVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGI
        SSQKNGCPK  NF+TGK+LRLRKYTAAAVAPRSA VCAAADP+RPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGI
Subjt:  SSQKNGCPKACNFVTGKKLRLRKYTAAAVAPRSATVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGI

Query:  FIPEFLTKIGILNTPSWYSAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTK
        FIPEFLTKIGILNTPSWY+AGELEYFTDTTTLF+VELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTK
Subjt:  FIPEFLTKIGILNTPSWYSAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTK

Query:  EIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA
        EIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA
Subjt:  EIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA

XP_022966812.1 chlorophyll a-b binding protein 7, chloroplastic-like [Cucurbita maxima]5.6e-14397.95Show/hide
Query:  SSQKNGCPKACNFVTGKKLRLRKYTAAAVAPRSATVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGI
        SSQKNGCPKA NFVTGKKLRLRKYT  AVAPRSA VCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGI
Subjt:  SSQKNGCPKACNFVTGKKLRLRKYTAAAVAPRSATVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGI

Query:  FIPEFLTKIGILNTPSWYSAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTK
        FIPEFLTKIGILNTPSWY+AGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTK
Subjt:  FIPEFLTKIGILNTPSWYSAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTK

Query:  EIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA
        EIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA
Subjt:  EIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA

XP_023541134.1 chlorophyll a-b binding protein 7, chloroplastic-like [Cucurbita pepo subsp. pepo]1.9e-14398.36Show/hide
Query:  SSQKNGCPKACNFVTGKKLRLRKYTAAAVAPRSATVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGI
        SSQKNGCPKA NFVTGKKLRLRKYT AAVAPRSA VCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGI
Subjt:  SSQKNGCPKACNFVTGKKLRLRKYTAAAVAPRSATVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGI

Query:  FIPEFLTKIGILNTPSWYSAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTK
        FIPEFLTKIGILNTPSWY+AGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTK
Subjt:  FIPEFLTKIGILNTPSWYSAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTK

Query:  EIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA
        EIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA
Subjt:  EIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA

TrEMBL top hitse value%identityAlignment
A0A6J1DD44 Chlorophyll a-b binding protein, chloroplastic2.0e-146100Show/hide
Query:  SSQKNGCPKACNFVTGKKLRLRKYTAAAVAPRSATVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGI
        SSQKNGCPKACNFVTGKKLRLRKYTAAAVAPRSATVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGI
Subjt:  SSQKNGCPKACNFVTGKKLRLRKYTAAAVAPRSATVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGI

Query:  FIPEFLTKIGILNTPSWYSAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTK
        FIPEFLTKIGILNTPSWYSAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTK
Subjt:  FIPEFLTKIGILNTPSWYSAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTK

Query:  EIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA
        EIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA
Subjt:  EIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA

A0A6J1FZP5 Chlorophyll a-b binding protein, chloroplastic7.9e-14397.54Show/hide
Query:  SSQKNGCPKACNFVTGKKLRLRKYTAAAVAPRSATVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGI
        SSQKNGCPKA NFVTGKKLRLRKYT   VAPRSA VCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGI
Subjt:  SSQKNGCPKACNFVTGKKLRLRKYTAAAVAPRSATVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGI

Query:  FIPEFLTKIGILNTPSWYSAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTK
        FIPEFLTKIGILNTPSWY+AGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTK
Subjt:  FIPEFLTKIGILNTPSWYSAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTK

Query:  EIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA
        EIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA
Subjt:  EIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA

A0A6J1H0H5 Chlorophyll a-b binding protein, chloroplastic2.3e-14296.72Show/hide
Query:  SSQKNGCPKACNFVTGKKLRLRKYTAAAVAPRSATVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGI
        SSQKNGCPK  NF+TGK+LRLRKYTAAAVAPRSA VCAAADP+RPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGI
Subjt:  SSQKNGCPKACNFVTGKKLRLRKYTAAAVAPRSATVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGI

Query:  FIPEFLTKIGILNTPSWYSAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTK
        FIPEFLTKIGILNTPSWY+AGELEYFTDTTTLF+VELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTK
Subjt:  FIPEFLTKIGILNTPSWYSAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTK

Query:  EIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA
        EIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA
Subjt:  EIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA

A0A6J1HNZ1 Chlorophyll a-b binding protein, chloroplastic2.7e-14397.95Show/hide
Query:  SSQKNGCPKACNFVTGKKLRLRKYTAAAVAPRSATVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGI
        SSQKNGCPKA NFVTGKKLRLRKYT  AVAPRSA VCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGI
Subjt:  SSQKNGCPKACNFVTGKKLRLRKYTAAAVAPRSATVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGI

Query:  FIPEFLTKIGILNTPSWYSAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTK
        FIPEFLTKIGILNTPSWY+AGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTK
Subjt:  FIPEFLTKIGILNTPSWYSAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTK

Query:  EIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA
        EIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA
Subjt:  EIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA

A0A6J1KAB5 Chlorophyll a-b binding protein, chloroplastic2.3e-14296.72Show/hide
Query:  SSQKNGCPKACNFVTGKKLRLRKYTAAAVAPRSATVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGI
        SSQKNGCPK  NF+TGK+LRLRKYTAAAVAPRSA VCAAADP+RPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGI
Subjt:  SSQKNGCPKACNFVTGKKLRLRKYTAAAVAPRSATVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGI

Query:  FIPEFLTKIGILNTPSWYSAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTK
        FIPEFLTKIGILNTPSWY+AGELEYFTDTTTLF+VELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTK
Subjt:  FIPEFLTKIGILNTPSWYSAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTK

Query:  EIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA
        EIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA
Subjt:  EIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA

SwissProt top hitse value%identityAlignment
P10708 Chlorophyll a-b binding protein 7, chloroplastic8.1e-12984Show/hide
Query:  SSQKNGC---PKACNFVTGKKLRLRKYTAAAVAPRSATVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGA
        SS++NG        +F+ G++LR+ KY+    A  + TVC AADP+RPLWFPGSTPPPWLDGSLPGDFGFDPLGL+SDPESLRWNQQAELVHCRWAMLGA
Subjt:  SSQKNGC---PKACNFVTGKKLRLRKYTAAAVAPRSATVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGA

Query:  AGIFIPEFLTKIGILNTPSWYSAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKEL
        AGIFIPE LTKIGILNTPSWY+AGE EYFTDTTTLF+VEL+ IGWAEGRRWADI+KPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSP KIKEL
Subjt:  AGIFIPEFLTKIGILNTPSWYSAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKEL

Query:  RTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAVSS
        RTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHAT+FA  S
Subjt:  RTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAVSS

P13869 Chlorophyll a-b binding protein, chloroplastic3.5e-12482.4Show/hide
Query:  SSQKNGC---PKACNFVTGKKLRLRKYTAAAVAPRSATVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGA
        SSQKNG        +F+ GK+LR+ K+ A   +   A    AADP+RPLWFPGSTPP WLDGSLPGDFGFDPLGL SDPESL+WN QAELVH RWAMLGA
Subjt:  SSQKNGC---PKACNFVTGKKLRLRKYTAAAVAPRSATVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGA

Query:  AGIFIPEFLTKIGILNTPSWYSAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKEL
        AGIFIPEFLTKIG+LNTPSWY+AGE EYFTDTTTLFV+EL+ IGWAEGRRWADI+KPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSP KIKEL
Subjt:  AGIFIPEFLTKIGILNTPSWYSAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKEL

Query:  RTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAVSS
        RTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHAT+FA  S
Subjt:  RTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAVSS

Q8LCQ4 Photosystem I chlorophyll a/b-binding protein 6, chloroplastic8.8e-8359.13Show/hide
Query:  TGKKLRLRKYTAAAVAPRSATVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNT
        TG +L   +          ++VC    P+RPLWFPGS+PP WLDGSLPGDFGFDPLGL SDP++L+W  QAEL+H RWAML   GI IPE L ++G +  
Subjt:  TGKKLRLRKYTAAAVAPRSATVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNT

Query:  PSWYSAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMG
         SWY AG  EYF D+TTLFV +++ +GWAEGRRWAD++KPG V+ +P +P+      DVGYPGGLWFD + WG GSPE +  LRTKEIKNGRLAMLA +G
Subjt:  PSWYSAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMG

Query:  AWFQHIYTGTGPIDNLFAHLADPGHATVFA
          FQ  YT   PI+NL AHLADPGH  VF+
Subjt:  AWFQHIYTGTGPIDNLFAHLADPGHATVFA

Q9SQL2 Chlorophyll a-b binding protein P4, chloroplastic4.0e-5948.73Show/hide
Query:  CPKACNFVTGKKLRLRKYTAAAVAPRSATVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGIFIPEFL
        C     F+ G   +L +  A      S +     +  +  W PG   P +L GSLPGD GFDPLGL+ DPE+LRW  QAELV+ RWAMLG AG+ +PE  
Subjt:  CPKACNFVTGKKLRLRKYTAAAVAPRSATVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGIFIPEFL

Query:  TKIGILNTPSWYSAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGR
        T IGI+N P WY+AG+ EYF  ++TLFV+E I   + E RRW DI  PG VN DPIF    L   +VGYPGG+ F+PL +         E + KEI NGR
Subjt:  TKIGILNTPSWYSAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGR

Query:  LAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATV
        LAMLA +G   QH  TG GP DNL  H++DP H T+
Subjt:  LAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATV

Q9SYW8 Photosystem I chlorophyll a/b-binding protein 2, chloroplastic3.3e-12283Show/hide
Query:  CSSQKNGCPKACNFVTGKKLRL-RKYTAAAVAPRSATVCA-AADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGA
        C+S       + +F+ GKKLRL +K T  AV+   A+V A AADP+RP+WFPGSTPP WLDGSLPGDFGFDPLGLSSDP+SL+WN QAE+VHCRWAMLGA
Subjt:  CSSQKNGCPKACNFVTGKKLRL-RKYTAAAVAPRSATVCA-AADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGA

Query:  AGIFIPEFLTKIGILNTPSWYSAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKEL
        AGIFIPEFLTKIGILNTPSWY+AGE EYFTD TTLFVVELI IGWAEGRRWADI+KPG VNTDP+FPNNKLTGTDVGYPGGLWFDPLGWGSGSP K+KEL
Subjt:  AGIFIPEFLTKIGILNTPSWYSAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKEL

Query:  RTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA
        RTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHAT+FA
Subjt:  RTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA

Arabidopsis top hitse value%identityAlignment
AT1G19150.1 photosystem I light harvesting complex gene 66.3e-8459.13Show/hide
Query:  TGKKLRLRKYTAAAVAPRSATVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNT
        TG +L   +          ++VC    P+RPLWFPGS+PP WLDGSLPGDFGFDPLGL SDP++L+W  QAEL+H RWAML   GI IPE L ++G +  
Subjt:  TGKKLRLRKYTAAAVAPRSATVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNT

Query:  PSWYSAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMG
         SWY AG  EYF D+TTLFV +++ +GWAEGRRWAD++KPG V+ +P +P+      DVGYPGGLWFD + WG GSPE +  LRTKEIKNGRLAMLA +G
Subjt:  PSWYSAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMG

Query:  AWFQHIYTGTGPIDNLFAHLADPGHATVFA
          FQ  YT   PI+NL AHLADPGH  VF+
Subjt:  AWFQHIYTGTGPIDNLFAHLADPGHATVFA

AT1G45474.1 photosystem I light harvesting complex gene 52.2e-5244.58Show/hide
Query:  VTGKKLRLRKYTAAAVAPRSATVCAAAD-------PNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGIFIPEFL
        +TG  L  R+  ++ +  R ++V AA           R  W PG  PPP+LDG+L GD+GFDPLGL  DPESL+W  QAELVH R+AMLG AGI   + L
Subjt:  VTGKKLRLRKYTAAAVAPRSATVCAAAD-------PNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGIFIPEFL

Query:  TKIGILNTPSWYSAGELEY-FTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIF---PNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEI
           GI N P WY AG +++ F  T TL VV+ + +G+AE +R+ D + PG    +  F       L G + GYPGG   +PLG      +   + + KEI
Subjt:  TKIGILNTPSWYSAGELEY-FTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIF---PNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEI

Query:  KNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATV
        KNGRLAM+A++G + Q   T TGPIDNL  HL++P H T+
Subjt:  KNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATV

AT3G47470.1 light-harvesting chlorophyll-protein complex I subunit A44.8e-6048.1Show/hide
Query:  CPKACNFVTGKKLRL-RKYTAAAVAPRSATVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGIFIPEF
        C     F+TG   RL R  +  ++   + T     +  +  W PG   P +L GSL GD GFDPLGL+ DPE+L+W  QAELV+ RWAMLG AG+ +PE 
Subjt:  CPKACNFVTGKKLRL-RKYTAAAVAPRSATVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGIFIPEF

Query:  LTKIGILNTPSWYSAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNG
         TKIGI+N P WY AG+ +YF  ++TLFV+E I   + E RRW DI  PG VN DPIF    L   +VGYPGG+ F+PL +        +E + KE+ NG
Subjt:  LTKIGILNTPSWYSAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNG

Query:  RLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATV
        RLAMLA +G   QH  TG GP +NL  HL+DP H T+
Subjt:  RLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATV

AT3G61470.1 photosystem I light harvesting complex gene 22.3e-12383Show/hide
Query:  CSSQKNGCPKACNFVTGKKLRL-RKYTAAAVAPRSATVCA-AADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGA
        C+S       + +F+ GKKLRL +K T  AV+   A+V A AADP+RP+WFPGSTPP WLDGSLPGDFGFDPLGLSSDP+SL+WN QAE+VHCRWAMLGA
Subjt:  CSSQKNGCPKACNFVTGKKLRL-RKYTAAAVAPRSATVCA-AADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGA

Query:  AGIFIPEFLTKIGILNTPSWYSAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKEL
        AGIFIPEFLTKIGILNTPSWY+AGE EYFTD TTLFVVELI IGWAEGRRWADI+KPG VNTDP+FPNNKLTGTDVGYPGGLWFDPLGWGSGSP K+KEL
Subjt:  AGIFIPEFLTKIGILNTPSWYSAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKEL

Query:  RTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA
        RTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHAT+FA
Subjt:  RTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA

AT5G28450.1 Chlorophyll A-B binding family protein1.3e-5291.84Show/hide
Query:  RWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA
        R  DI+KPG VNTDP+FPNNKLTGTD+GYPGGLWFDPLGWGSGSP KIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHAT+FA
Subjt:  RWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGTTGCAGTTCCCAGAAGAATGGGTGCCCCAAGGCTTGTAATTTCGTAACGGGGAAGAAGCTGAGGCTGAGAAAGTACACGGCAGCTGCCGTTGCTCCTCGGTCGGCTAC
GGTGTGCGCCGCTGCCGACCCCAACAGACCTCTCTGGTTCCCCGGCAGCACCCCTCCTCCATGGCTCGATGGCAGCCTCCCCGGTGACTTTGGCTTCGATCCTCTTGGTC
TTTCTTCTGATCCGGAGAGCCTGAGATGGAACCAGCAGGCGGAGCTGGTGCACTGCCGGTGGGCAATGTTGGGGGCGGCCGGAATTTTCATCCCGGAATTCTTGACGAAG
ATCGGAATTTTGAACACTCCGTCGTGGTACTCGGCCGGAGAATTGGAATACTTCACCGACACCACCACGCTCTTCGTGGTGGAACTCATTTTCATCGGTTGGGCCGAGGG
CAGACGGTGGGCCGACATCCTCAAACCCGGCTGCGTCAACACCGACCCGATCTTCCCCAACAACAAGCTGACCGGAACCGACGTCGGGTACCCGGGCGGACTCTGGTTCG
ACCCGCTCGGATGGGGCAGCGGTTCCCCCGAAAAGATCAAGGAATTGAGAACGAAAGAGATCAAGAACGGGCGGTTGGCGATGTTGGCGGTCATGGGCGCGTGGTTCCAA
CACATTTACACCGGCACCGGTCCCATCGACAACCTTTTTGCCCACCTCGCCGACCCCGGCCACGCCACCGTCTTCGCCGTGAGTTCA
mRNA sequenceShow/hide mRNA sequence
TGTTGCAGTTCCCAGAAGAATGGGTGCCCCAAGGCTTGTAATTTCGTAACGGGGAAGAAGCTGAGGCTGAGAAAGTACACGGCAGCTGCCGTTGCTCCTCGGTCGGCTAC
GGTGTGCGCCGCTGCCGACCCCAACAGACCTCTCTGGTTCCCCGGCAGCACCCCTCCTCCATGGCTCGATGGCAGCCTCCCCGGTGACTTTGGCTTCGATCCTCTTGGTC
TTTCTTCTGATCCGGAGAGCCTGAGATGGAACCAGCAGGCGGAGCTGGTGCACTGCCGGTGGGCAATGTTGGGGGCGGCCGGAATTTTCATCCCGGAATTCTTGACGAAG
ATCGGAATTTTGAACACTCCGTCGTGGTACTCGGCCGGAGAATTGGAATACTTCACCGACACCACCACGCTCTTCGTGGTGGAACTCATTTTCATCGGTTGGGCCGAGGG
CAGACGGTGGGCCGACATCCTCAAACCCGGCTGCGTCAACACCGACCCGATCTTCCCCAACAACAAGCTGACCGGAACCGACGTCGGGTACCCGGGCGGACTCTGGTTCG
ACCCGCTCGGATGGGGCAGCGGTTCCCCCGAAAAGATCAAGGAATTGAGAACGAAAGAGATCAAGAACGGGCGGTTGGCGATGTTGGCGGTCATGGGCGCGTGGTTCCAA
CACATTTACACCGGCACCGGTCCCATCGACAACCTTTTTGCCCACCTCGCCGACCCCGGCCACGCCACCGTCTTCGCCGTGAGTTCA
Protein sequenceShow/hide protein sequence
CCSSQKNGCPKACNFVTGKKLRLRKYTAAAVAPRSATVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGIFIPEFLTK
IGILNTPSWYSAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQ
HIYTGTGPIDNLFAHLADPGHATVFAVSS