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MS014973 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS014973
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold2:353406..353528
RNA-Seq ExpressionMS014973
SyntenyMS014973
Gene Ontology termsGO:0055085 - transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0140359 - ABC-type transmembrane transporter activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601577.1 ABC transporter C family member 3, partial [Cucurbita argyrosperma subsp. sororia]2.0e-0565.85Show/hide
Query:  HSKLISTPNGELAGHIAARKRSLNGVKSFKEDKLHHERSCQ
        +++LIS  NGELA HIAA +RSLNGVK  KEDK HH+R C+
Subjt:  HSKLISTPNGELAGHIAARKRSLNGVKSFKEDKLHHERSCQ
KAG7032342.1 ABC transporter C family member 3, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-0565.85Show/hide
Query:  HSKLISTPNGELAGHIAARKRSLNGVKSFKEDKLHHERSCQ
        +++LIS  NGELA HIAA +RSLNGVK  KEDK HH+R C+
Subjt:  HSKLISTPNGELAGHIAARKRSLNGVKSFKEDKLHHERSCQ
XP_022151948.1 putative ABC transporter C family member 15 [Momordica charantia]6.6e-0978.05Show/hide
Query:  HSKLISTPNGELAGHIAARKRSLNGVKSFKEDKLHHERSCQ
        +++LIS PNGEL+ HIAA KRSLNGVK FKEDKLHHER CQ
Subjt:  HSKLISTPNGELAGHIAARKRSLNGVKSFKEDKLHHERSCQ
XP_022956964.1 putative ABC transporter C family member 15 [Cucurbita moschata]2.0e-0565.85Show/hide
Query:  HSKLISTPNGELAGHIAARKRSLNGVKSFKEDKLHHERSCQ
        +++LIS  NGELA HIAA +RSLNGVK  KEDK HH+R C+
Subjt:  HSKLISTPNGELAGHIAARKRSLNGVKSFKEDKLHHERSCQ
XP_038892249.1 putative ABC transporter C family member 15 [Benincasa hispida]2.6e-0563.41Show/hide
Query:  HSKLISTPNGELAGHIAARKRSLNGVKSFKEDKLHHERSCQ
        +++L+S  NGELA HIAA +RSLNGVK FKE+K HH+R C+
Subjt:  HSKLISTPNGELAGHIAARKRSLNGVKSFKEDKLHHERSCQ
TrEMBL top hitse value%identityAlignment
A0A1S3BF27 putative ABC transporter C family member 152.4e-0465.79Show/hide
Query:  HSKLISTPNGELAGHIAARKRSLNGVKSFKEDKLHHER
        +++L+S  NGELA HIAA +R LNGVK FKEDK HH+R
Subjt:  HSKLISTPNGELAGHIAARKRSLNGVKSFKEDKLHHER
A0A5D3CUX0 Putative ABC transporter C family member 152.4e-0465.79Show/hide
Query:  HSKLISTPNGELAGHIAARKRSLNGVKSFKEDKLHHER
        +++L+S  NGELA HIAA +R LNGVK FKEDK HH+R
Subjt:  HSKLISTPNGELAGHIAARKRSLNGVKSFKEDKLHHER
A0A6J1DDJ4 putative ABC transporter C family member 153.2e-0978.05Show/hide
Query:  HSKLISTPNGELAGHIAARKRSLNGVKSFKEDKLHHERSCQ
        +++LIS PNGEL+ HIAA KRSLNGVK FKEDKLHHER CQ
Subjt:  HSKLISTPNGELAGHIAARKRSLNGVKSFKEDKLHHERSCQ
A0A6J1H0K9 putative ABC transporter C family member 159.6e-0665.85Show/hide
Query:  HSKLISTPNGELAGHIAARKRSLNGVKSFKEDKLHHERSCQ
        +++LIS  NGELA HIAA +RSLNGVK  KEDK HH+R C+
Subjt:  HSKLISTPNGELAGHIAARKRSLNGVKSFKEDKLHHERSCQ
A0A6J1K6R8 putative ABC transporter C family member 153.1e-0463.41Show/hide
Query:  HSKLISTPNGELAGHIAARKRSLNGVKSFKEDKLHHERSCQ
        +++LIS  NGELA HIAA +RSLNGVK  KED+ HH+R C+
Subjt:  HSKLISTPNGELAGHIAARKRSLNGVKSFKEDKLHHERSCQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CATTCAAAATTAATATCAACTCCAAACGGTGAACTTGCAGGGCATATTGCAGCACGCAAAAGATCATTAAATGGAGTTAAGTCGTTCAAAGAAGATAAACTCCATCATGA
AAGATCATGTCAA
mRNA sequenceShow/hide mRNA sequence
CATTCAAAATTAATATCAACTCCAAACGGTGAACTTGCAGGGCATATTGCAGCACGCAAAAGATCATTAAATGGAGTTAAGTCGTTCAAAGAAGATAAACTCCATCATGA
AAGATCATGTCAA
Protein sequenceShow/hide protein sequence
HSKLISTPNGELAGHIAARKRSLNGVKSFKEDKLHHERSCQ