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MS014974 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS014974
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionMultidrug resistance protein ABC transporter family isoform 1
Genome locationscaffold2:354514..354702
RNA-Seq ExpressionMS014974
SyntenyMS014974
Gene Ontology termsGO:0055085 - transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0140359 - ABC-type transmembrane transporter activity (molecular function)
InterPro domainsIPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034219.1 putative ABC transporter C family member 15 [Cucumis melo var. makuwa]5.9e-1775.41Show/hide
Query:  SDIKIEIEAGDYSFEANDLHVKKPTTKVVEKMSIPKGYKVAVCGSVGLGKSSLLCSILGEV
        SD+ IE+E G+YS+EA+D + KKPT KV EKM IPKGYKVAVCGSVG GKSSLLCSILGE+
Subjt:  SDIKIEIEAGDYSFEANDLHVKKPTTKVVEKMSIPKGYKVAVCGSVGLGKSSLLCSILGEV

XP_022151948.1 putative ABC transporter C family member 15 [Momordica charantia]1.7e-1983.87Show/hide
Query:  GSDIKIEIEAGDYSFEANDLHVKKPTTKVVEKMSIPKGYKVAVCGSVGLGKSSLLCSILGEV
        GS+I I IE GDYS+EANDL+VKKPT KVVEKM IPKGYKVAVCGSVG GKSSLLCSILGE+
Subjt:  GSDIKIEIEAGDYSFEANDLHVKKPTTKVVEKMSIPKGYKVAVCGSVGLGKSSLLCSILGEV

XP_022997171.1 putative ABC transporter C family member 15 [Cucurbita maxima]5.9e-1777.05Show/hide
Query:  SDIKIEIEAGDYSFEANDLHVKKPTTKVVEKMSIPKGYKVAVCGSVGLGKSSLLCSILGEV
        SDI IE+E G+Y +EA+DL+ KKPT KV EKM IPKGYKVAVCGSVG GKSSLLCSILGE+
Subjt:  SDIKIEIEAGDYSFEANDLHVKKPTTKVVEKMSIPKGYKVAVCGSVGLGKSSLLCSILGEV

XP_023512574.1 putative ABC transporter C family member 15 [Cucurbita pepo subsp. pepo]5.9e-1777.05Show/hide
Query:  SDIKIEIEAGDYSFEANDLHVKKPTTKVVEKMSIPKGYKVAVCGSVGLGKSSLLCSILGEV
        SDI IE+E G+Y +EA+DL+ KKPT KV EKM IPKGYKVAVCGSVG GKSSLLCSILGE+
Subjt:  SDIKIEIEAGDYSFEANDLHVKKPTTKVVEKMSIPKGYKVAVCGSVGLGKSSLLCSILGEV

XP_038892249.1 putative ABC transporter C family member 15 [Benincasa hispida]1.2e-1777.05Show/hide
Query:  SDIKIEIEAGDYSFEANDLHVKKPTTKVVEKMSIPKGYKVAVCGSVGLGKSSLLCSILGEV
        SD+ IE+E G+YS+EA+DL+ KKPT KV EKM IPKGYKVAVCGSVG GKSSLLCSILGE+
Subjt:  SDIKIEIEAGDYSFEANDLHVKKPTTKVVEKMSIPKGYKVAVCGSVGLGKSSLLCSILGEV

TrEMBL top hitse value%identityAlignment
A0A0A0KS22 Uncharacterized protein2.9e-1775.41Show/hide
Query:  SDIKIEIEAGDYSFEANDLHVKKPTTKVVEKMSIPKGYKVAVCGSVGLGKSSLLCSILGEV
        SD+ IE+E G+YS+EA+D + KKPT KV EKM IPKGYKVAVCGSVG GKSSLLCSILGE+
Subjt:  SDIKIEIEAGDYSFEANDLHVKKPTTKVVEKMSIPKGYKVAVCGSVGLGKSSLLCSILGEV

A0A1S3BF27 putative ABC transporter C family member 152.9e-1775.41Show/hide
Query:  SDIKIEIEAGDYSFEANDLHVKKPTTKVVEKMSIPKGYKVAVCGSVGLGKSSLLCSILGEV
        SD+ IE+E G+YS+EA+D + KKPT KV EKM IPKGYKVAVCGSVG GKSSLLCSILGE+
Subjt:  SDIKIEIEAGDYSFEANDLHVKKPTTKVVEKMSIPKGYKVAVCGSVGLGKSSLLCSILGEV

A0A5D3CUX0 Putative ABC transporter C family member 152.9e-1775.41Show/hide
Query:  SDIKIEIEAGDYSFEANDLHVKKPTTKVVEKMSIPKGYKVAVCGSVGLGKSSLLCSILGEV
        SD+ IE+E G+YS+EA+D + KKPT KV EKM IPKGYKVAVCGSVG GKSSLLCSILGE+
Subjt:  SDIKIEIEAGDYSFEANDLHVKKPTTKVVEKMSIPKGYKVAVCGSVGLGKSSLLCSILGEV

A0A6J1DDJ4 putative ABC transporter C family member 158.1e-2083.87Show/hide
Query:  GSDIKIEIEAGDYSFEANDLHVKKPTTKVVEKMSIPKGYKVAVCGSVGLGKSSLLCSILGEV
        GS+I I IE GDYS+EANDL+VKKPT KVVEKM IPKGYKVAVCGSVG GKSSLLCSILGE+
Subjt:  GSDIKIEIEAGDYSFEANDLHVKKPTTKVVEKMSIPKGYKVAVCGSVGLGKSSLLCSILGEV

A0A6J1K6R8 putative ABC transporter C family member 152.9e-1777.05Show/hide
Query:  SDIKIEIEAGDYSFEANDLHVKKPTTKVVEKMSIPKGYKVAVCGSVGLGKSSLLCSILGEV
        SDI IE+E G+Y +EA+DL+ KKPT KV EKM IPKGYKVAVCGSVG GKSSLLCSILGE+
Subjt:  SDIKIEIEAGDYSFEANDLHVKKPTTKVVEKMSIPKGYKVAVCGSVGLGKSSLLCSILGEV

SwissProt top hitse value%identityAlignment
Q7FB56 Putative ABC transporter C family member 151.4e-0544.26Show/hide
Query:  SDIKIEIEAGDYSFEANDLHVKKPTTKVVEKMSIPKGYKVAVCGSVGLGKSSLLCSILGEV
        ++  +EIE G +S+E       +PT   +E + +  G KVA+CG+VG GKSSL  SILGE+
Subjt:  SDIKIEIEAGDYSFEANDLHVKKPTTKVVEKMSIPKGYKVAVCGSVGLGKSSLLCSILGEV

Q7GB25 ABC transporter C family member 57.1e-0544.44Show/hide
Query:  GGSDIKIEIEAGDYSFEANDLHVKKPTTKVVEKMSIPKGYKVAVCGSVGLGKSSLLCSILGEV
        G S+I IEI+ G + +   D    +PT   ++ M + KG +VAVCG+VG GKSS +  ILGE+
Subjt:  GGSDIKIEIEAGDYSFEANDLHVKKPTTKVVEKMSIPKGYKVAVCGSVGLGKSSLLCSILGEV

Q9LK62 ABC transporter C family member 71.1e-0544.44Show/hide
Query:  GGSDIKIEIEAGDYSFEANDLHVKKPTTKVVEKMSIPKGYKVAVCGSVGLGKSSLLCSILGEV
        G S + +E+  G +S++ +      PT K + +  IP G  +A+CG+VG GKSSLL SILGEV
Subjt:  GGSDIKIEIEAGDYSFEANDLHVKKPTTKVVEKMSIPKGYKVAVCGSVGLGKSSLLCSILGEV

Q9LK64 ABC transporter C family member 31.4e-0547.62Show/hide
Query:  GGSDIKIEIEAGDYSFEANDLHVKKPTTKVVEKMSIPKGYKVAVCGSVGLGKSSLLCSILGEV
        G SD+ +E+     S+   D+    PT K +     P G KVAVCG+VG GKSSLL S+LGEV
Subjt:  GGSDIKIEIEAGDYSFEANDLHVKKPTTKVVEKMSIPKGYKVAVCGSVGLGKSSLLCSILGEV

Q9M1C7 ABC transporter C family member 99.9e-0747.54Show/hide
Query:  SDIKIEIEAGDYSFEANDLHVKKPTTKVVEKMSIPKGYKVAVCGSVGLGKSSLLCSILGEV
        +++ +EIE G +S+E       +PT   +E + +  G KVAVCG+VG GKSSLL SILGE+
Subjt:  SDIKIEIEAGDYSFEANDLHVKKPTTKVVEKMSIPKGYKVAVCGSVGLGKSSLLCSILGEV

Arabidopsis top hitse value%identityAlignment
AT3G13080.1 multidrug resistance-associated protein 31.0e-0647.62Show/hide
Query:  GGSDIKIEIEAGDYSFEANDLHVKKPTTKVVEKMSIPKGYKVAVCGSVGLGKSSLLCSILGEV
        G SD+ +E+     S+   D+    PT K +     P G KVAVCG+VG GKSSLL S+LGEV
Subjt:  GGSDIKIEIEAGDYSFEANDLHVKKPTTKVVEKMSIPKGYKVAVCGSVGLGKSSLLCSILGEV

AT3G13080.2 multidrug resistance-associated protein 31.0e-0647.62Show/hide
Query:  GGSDIKIEIEAGDYSFEANDLHVKKPTTKVVEKMSIPKGYKVAVCGSVGLGKSSLLCSILGEV
        G SD+ +E+     S+   D+    PT K +     P G KVAVCG+VG GKSSLL S+LGEV
Subjt:  GGSDIKIEIEAGDYSFEANDLHVKKPTTKVVEKMSIPKGYKVAVCGSVGLGKSSLLCSILGEV

AT3G13080.3 multidrug resistance-associated protein 31.0e-0647.62Show/hide
Query:  GGSDIKIEIEAGDYSFEANDLHVKKPTTKVVEKMSIPKGYKVAVCGSVGLGKSSLLCSILGEV
        G SD+ +E+     S+   D+    PT K +     P G KVAVCG+VG GKSSLL S+LGEV
Subjt:  GGSDIKIEIEAGDYSFEANDLHVKKPTTKVVEKMSIPKGYKVAVCGSVGLGKSSLLCSILGEV

AT3G13080.4 multidrug resistance-associated protein 31.0e-0647.62Show/hide
Query:  GGSDIKIEIEAGDYSFEANDLHVKKPTTKVVEKMSIPKGYKVAVCGSVGLGKSSLLCSILGEV
        G SD+ +E+     S+   D+    PT K +     P G KVAVCG+VG GKSSLL S+LGEV
Subjt:  GGSDIKIEIEAGDYSFEANDLHVKKPTTKVVEKMSIPKGYKVAVCGSVGLGKSSLLCSILGEV

AT3G60160.1 multidrug resistance-associated protein 97.0e-0847.54Show/hide
Query:  SDIKIEIEAGDYSFEANDLHVKKPTTKVVEKMSIPKGYKVAVCGSVGLGKSSLLCSILGEV
        +++ +EIE G +S+E       +PT   +E + +  G KVAVCG+VG GKSSLL SILGE+
Subjt:  SDIKIEIEAGDYSFEANDLHVKKPTTKVVEKMSIPKGYKVAVCGSVGLGKSSLLCSILGEV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGTGGATCTGACATCAAGATTGAAATTGAGGCAGGTGATTATTCTTTTGAAGCAAATGATCTACATGTTAAGAAACCAACGACAAAAGTTGTAGAGAAGATGTCGATACC
AAAAGGTTATAAGGTTGCGGTTTGTGGGTCAGTTGGCTTAGGAAAATCAAGCCTACTTTGTAGTATATTGGGCGAGGTC
mRNA sequenceShow/hide mRNA sequence
GGTGGATCTGACATCAAGATTGAAATTGAGGCAGGTGATTATTCTTTTGAAGCAAATGATCTACATGTTAAGAAACCAACGACAAAAGTTGTAGAGAAGATGTCGATACC
AAAAGGTTATAAGGTTGCGGTTTGTGGGTCAGTTGGCTTAGGAAAATCAAGCCTACTTTGTAGTATATTGGGCGAGGTC
Protein sequenceShow/hide protein sequence
GGSDIKIEIEAGDYSFEANDLHVKKPTTKVVEKMSIPKGYKVAVCGSVGLGKSSLLCSILGEV