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MS014985 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS014985
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRPM1-interacting protein 4-like
Genome locationscaffold2:399304..399522
RNA-Seq ExpressionMS014985
SyntenyMS014985
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
InterPro domainsIPR008700 - RIN4, pathogenic type III effector avirulence factor Avr cleavage site
IPR040387 - RPM1-interacting protein 4/NOI4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573672.1 hypothetical protein SDJN03_27559, partial [Cucurbita argyrosperma subsp. sororia]2.5e-1157.53Show/hide
Query:  GRTLPKFGQWDAKDPASAEGFTMIFNKARDNKKNGGGTTSKTVISQKTQ------NQKHEASKKNHKYEFPRK
        G +LPKFG+WD KDPA+AEGFT+IF++ARD KKNGG  T   VI Q+ Q      ++ HEA+KKN K ++PRK
Subjt:  GRTLPKFGQWDAKDPASAEGFTMIFNKARDNKKNGGGTTSKTVISQKTQ------NQKHEASKKNHKYEFPRK

XP_004135294.1 protein NOI4 [Cucumis sativus]2.3e-1260.29Show/hide
Query:  GRTLPKFGQWDAKDPASAEGFTMIFNKARDNKKNGGGT-TSKTVISQKTQNQKHEASKKNHKYEFPRK
        G  LPKFG WD ++PA+AEGFT+IFN+ARDNKKNGG   T   VI  + Q+QK+E +KKN K+++PRK
Subjt:  GRTLPKFGQWDAKDPASAEGFTMIFNKARDNKKNGGGT-TSKTVISQKTQNQKHEASKKNHKYEFPRK

XP_022151929.1 RPM1-interacting protein 4-like [Momordica charantia]3.2e-3098.57Show/hide
Query:  GDNGRTLPKFGQWDAKDPASAEGFTMIFNKARDNKKNGGGTTSKTVISQKTQNQKHEASKKNHKYEFPRK
        GDNGRTLPKFG+WDAKDPASAEGFTMIFNKARDNKKNGGGTTSKTVISQKTQNQKHEASKKNHKYEFPRK
Subjt:  GDNGRTLPKFGQWDAKDPASAEGFTMIFNKARDNKKNGGGTTSKTVISQKTQNQKHEASKKNHKYEFPRK

XP_038892913.1 protein NOI4-like isoform X1 [Benincasa hispida]1.7e-1566.67Show/hide
Query:  GRTLPKFGQWDAKDPASAEGFTMIFNKARDNKKNGGGT-TSKTVISQKTQNQ----KHEASKKNHKYEFPRK
        G  LPKFG+WD K+PA+AEGFT+IF++ARDNKKNGGGT T   VI Q+ QNQ    KHEA+KKNH++E+PRK
Subjt:  GRTLPKFGQWDAKDPASAEGFTMIFNKARDNKKNGGGT-TSKTVISQKTQNQ----KHEASKKNHKYEFPRK

XP_038892914.1 protein NOI4-like isoform X2 [Benincasa hispida]1.3e-1565.75Show/hide
Query:  NGRTLPKFGQWDAKDPASAEGFTMIFNKARDNKKNGGGT-TSKTVISQKTQNQ----KHEASKKNHKYEFPRK
        +G  LPKFG+WD K+PA+AEGFT+IF++ARDNKKNGGGT T   VI Q+ QNQ    KHEA+KKNH++E+PRK
Subjt:  NGRTLPKFGQWDAKDPASAEGFTMIFNKARDNKKNGGGT-TSKTVISQKTQNQ----KHEASKKNHKYEFPRK

TrEMBL top hitse value%identityAlignment
A0A0A0KTF9 AvrRpt-cleavage domain-containing protein1.1e-1260.29Show/hide
Query:  GRTLPKFGQWDAKDPASAEGFTMIFNKARDNKKNGGGT-TSKTVISQKTQNQKHEASKKNHKYEFPRK
        G  LPKFG WD ++PA+AEGFT+IFN+ARDNKKNGG   T   VI  + Q+QK+E +KKN K+++PRK
Subjt:  GRTLPKFGQWDAKDPASAEGFTMIFNKARDNKKNGGGT-TSKTVISQKTQNQKHEASKKNHKYEFPRK

A0A6J1DEH9 RPM1-interacting protein 4-like1.5e-3098.57Show/hide
Query:  GDNGRTLPKFGQWDAKDPASAEGFTMIFNKARDNKKNGGGTTSKTVISQKTQNQKHEASKKNHKYEFPRK
        GDNGRTLPKFG+WDAKDPASAEGFTMIFNKARDNKKNGGGTTSKTVISQKTQNQKHEASKKNHKYEFPRK
Subjt:  GDNGRTLPKFGQWDAKDPASAEGFTMIFNKARDNKKNGGGTTSKTVISQKTQNQKHEASKKNHKYEFPRK

A0A6J1G0L7 RPM1-interacting protein 4-like1.2e-1157.53Show/hide
Query:  GRTLPKFGQWDAKDPASAEGFTMIFNKARDNKKNGGGTTSKTVISQKTQ------NQKHEASKKNHKYEFPRK
        G +LPKFG+WD KDPA+AEGFT+IF++ARD KKNGG  T   VI Q+ Q      ++ HEA+KKN K ++PRK
Subjt:  GRTLPKFGQWDAKDPASAEGFTMIFNKARDNKKNGGGTTSKTVISQKTQ------NQKHEASKKNHKYEFPRK

A0A6P6GIH8 protein NOI4-like isoform X21.8e-1053.62Show/hide
Query:  DNGRTLPKFGQWDAKDPASAEGFTMIFNKARDNKKNGGGTTSKTVISQKTQNQKHEASKKNHKYEFPRK
        +N R LPKFG+WD  DPASA+GFT+IFNKARD KK+GG +T   +        K+E  K+N KY++P K
Subjt:  DNGRTLPKFGQWDAKDPASAEGFTMIFNKARDNKKNGGGTTSKTVISQKTQNQKHEASKKNHKYEFPRK

A0A6P6GJB7 protein NOI4-like isoform X11.8e-1053.62Show/hide
Query:  DNGRTLPKFGQWDAKDPASAEGFTMIFNKARDNKKNGGGTTSKTVISQKTQNQKHEASKKNHKYEFPRK
        +N R LPKFG+WD  DPASA+GFT+IFNKARD KK+GG +T   +        K+E  K+N KY++P K
Subjt:  DNGRTLPKFGQWDAKDPASAEGFTMIFNKARDNKKNGGGTTSKTVISQKTQNQKHEASKKNHKYEFPRK

SwissProt top hitse value%identityAlignment
O22633 Protein NOI43.4e-1178.95Show/hide
Query:  DNGRTLPKFGQWDAKDPASAEGFTMIFNKARDNKKNGG
        D GR LPKFG+WD  DPASAEGFT+IFNKARD KK GG
Subjt:  DNGRTLPKFGQWDAKDPASAEGFTMIFNKARDNKKNGG

Q8GYN5 RPM1-interacting protein 41.1e-0440Show/hide
Query:  LPKFGQWDAKDPASAEGFTMIFNKARDNKKNGGGT--TSKTVISQKTQNQKHEAS
        +PKFG WD  +P+SA+G+T IFNK R+ + +G     +S+T   Q ++N  + +S
Subjt:  LPKFGQWDAKDPASAEGFTMIFNKARDNKKNGGGT--TSKTVISQKTQNQKHEAS

Arabidopsis top hitse value%identityAlignment
AT2G04410.1 RPM1-interacting protein 4 (RIN4) family protein1.6e-1169.05Show/hide
Query:  DNGRTLPKFGQWDAKDPASAEGFTMIFNKARDNKKNGGGTTS
        D GR LPKFG+WD  DP+SAEGFT+IFNKAR+ KK GG + S
Subjt:  DNGRTLPKFGQWDAKDPASAEGFTMIFNKARDNKKNGGGTTS

AT3G48450.1 RPM1-interacting protein 4 (RIN4) family protein5.6e-0945.07Show/hide
Query:  GDNGRTLPKFGQWDAKDPASAEGFTMIFNKARDNKKNGGGTTSKTVIS------QKTQNQKHEASKKNHKY
        G+  R LPKFG+WDA +P SAEGFT+IFNKARD+KK     T KT ++         +N++   +  NH +
Subjt:  GDNGRTLPKFGQWDAKDPASAEGFTMIFNKARDNKKNGGGTTSKTVIS------QKTQNQKHEASKKNHKY

AT5G55850.1 RPM1-interacting protein 4 (RIN4) family protein2.4e-1278.95Show/hide
Query:  DNGRTLPKFGQWDAKDPASAEGFTMIFNKARDNKKNGG
        D GR LPKFG+WD  DPASAEGFT+IFNKARD KK GG
Subjt:  DNGRTLPKFGQWDAKDPASAEGFTMIFNKARDNKKNGG

AT5G55850.2 RPM1-interacting protein 4 (RIN4) family protein2.4e-1278.95Show/hide
Query:  DNGRTLPKFGQWDAKDPASAEGFTMIFNKARDNKKNGG
        D GR LPKFG+WD  DPASAEGFT+IFNKARD KK GG
Subjt:  DNGRTLPKFGQWDAKDPASAEGFTMIFNKARDNKKNGG

AT5G55850.3 RPM1-interacting protein 4 (RIN4) family protein2.4e-1278.95Show/hide
Query:  DNGRTLPKFGQWDAKDPASAEGFTMIFNKARDNKKNGG
        D GR LPKFG+WD  DPASAEGFT+IFNKARD KK GG
Subjt:  DNGRTLPKFGQWDAKDPASAEGFTMIFNKARDNKKNGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TATTTGCAGGGTGACAATGGCAGAACTCTACCCAAATTTGGTCAGTGGGATGCTAAGGATCCTGCTTCGGCTGAAGGGTTCACGATGATTTTCAACAAGGCAAGAGATAA
TAAGAAGAATGGAGGAGGAACAACTTCAAAGACAGTGATTTCGCAGAAAACCCAAAACCAAAAACATGAAGCTTCAAAGAAGAATCACAAGTACGAGTTTCCAAGAAAG
mRNA sequenceShow/hide mRNA sequence
TATTTGCAGGGTGACAATGGCAGAACTCTACCCAAATTTGGTCAGTGGGATGCTAAGGATCCTGCTTCGGCTGAAGGGTTCACGATGATTTTCAACAAGGCAAGAGATAA
TAAGAAGAATGGAGGAGGAACAACTTCAAAGACAGTGATTTCGCAGAAAACCCAAAACCAAAAACATGAAGCTTCAAAGAAGAATCACAAGTACGAGTTTCCAAGAAAG
Protein sequenceShow/hide protein sequence
YLQGDNGRTLPKFGQWDAKDPASAEGFTMIFNKARDNKKNGGGTTSKTVISQKTQNQKHEASKKNHKYEFPRK