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MS015000 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015000
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionABC transporter B family member 15-like
Genome locationscaffold2:462954..463148
RNA-Seq ExpressionMS015000
SyntenyMS015000
Gene Ontology termsGO:0055085 - transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0140359 - ABC-type transmembrane transporter activity (molecular function)
InterPro domainsIPR036640 - ABC transporter type 1, transmembrane domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034243.1 putative multidrug resistance protein [Cucumis melo var. makuwa]1.0e-1676.19Show/hide
Query:  MGMKKSGLFRYADGVDKFLLLLGSLGSIGDGLTTPLTMLVLSGMINQYSRSNPNTFSNQVVDK
        MG KK+G+FRYAD VD  L++LG LGSIGDGLTTPLTMLVLSGMIN YS S+ N+FSN VVDK
Subjt:  MGMKKSGLFRYADGVDKFLLLLGSLGSIGDGLTTPLTMLVLSGMINQYSRSNPNTFSNQVVDK

TYK15677.1 putative multidrug resistance protein [Cucumis melo var. makuwa]1.0e-1676.19Show/hide
Query:  MGMKKSGLFRYADGVDKFLLLLGSLGSIGDGLTTPLTMLVLSGMINQYSRSNPNTFSNQVVDK
        MG KK+G+FRYAD VD  L++LG LGSIGDGLTTPLTMLVLSGMIN YS S+ N+FSN VVDK
Subjt:  MGMKKSGLFRYADGVDKFLLLLGSLGSIGDGLTTPLTMLVLSGMINQYSRSNPNTFSNQVVDK

XP_004135503.1 ABC transporter B family member 15 [Cucumis sativus]1.8e-1674.6Show/hide
Query:  MGMKKSGLFRYADGVDKFLLLLGSLGSIGDGLTTPLTMLVLSGMINQYSRSNPNTFSNQVVDK
        MG KK+G+FRYAD +D+ L+ LG LGSIGDGLTTPLTMLVLSGMIN YS S+ N+FSN VVDK
Subjt:  MGMKKSGLFRYADGVDKFLLLLGSLGSIGDGLTTPLTMLVLSGMINQYSRSNPNTFSNQVVDK

XP_008446126.1 PREDICTED: putative multidrug resistance protein [Cucumis melo]1.0e-1676.19Show/hide
Query:  MGMKKSGLFRYADGVDKFLLLLGSLGSIGDGLTTPLTMLVLSGMINQYSRSNPNTFSNQVVDK
        MG KK+G+FRYAD VD  L++LG LGSIGDGLTTPLTMLVLSGMIN YS S+ N+FSN VVDK
Subjt:  MGMKKSGLFRYADGVDKFLLLLGSLGSIGDGLTTPLTMLVLSGMINQYSRSNPNTFSNQVVDK

XP_022151783.1 ABC transporter B family member 15-like [Momordica charantia]1.0e-2498.41Show/hide
Query:  MGMKKSGLFRYADGVDKFLLLLGSLGSIGDGLTTPLTMLVLSGMINQYSRSNPNTFSNQVVDK
        MGMKKSGLFRYADGVDKFLLLLGSLGSIGDGLTTPLTMLVLSGMINQYSRSNPNT SNQVVDK
Subjt:  MGMKKSGLFRYADGVDKFLLLLGSLGSIGDGLTTPLTMLVLSGMINQYSRSNPNTFSNQVVDK

TrEMBL top hitse value%identityAlignment
A0A0A0KS41 Uncharacterized protein1.7e-1773.85Show/hide
Query:  MGMKKSGLFRYADGVDKFLLLLGSLGSIGDGLTTPLTMLVLSGMINQYSRSNPNTFSNQVVDKVL
        MG KK+G+FRYAD +D+ L+ LG LGSIGDGLTTPLTMLVLSGMIN YS S+ N+FSN VVDKV+
Subjt:  MGMKKSGLFRYADGVDKFLLLLGSLGSIGDGLTTPLTMLVLSGMINQYSRSNPNTFSNQVVDKVL

A0A1S3BEB7 putative multidrug resistance protein5.1e-1776.19Show/hide
Query:  MGMKKSGLFRYADGVDKFLLLLGSLGSIGDGLTTPLTMLVLSGMINQYSRSNPNTFSNQVVDK
        MG KK+G+FRYAD VD  L++LG LGSIGDGLTTPLTMLVLSGMIN YS S+ N+FSN VVDK
Subjt:  MGMKKSGLFRYADGVDKFLLLLGSLGSIGDGLTTPLTMLVLSGMINQYSRSNPNTFSNQVVDK

A0A5A7SUU5 Putative multidrug resistance protein5.1e-1776.19Show/hide
Query:  MGMKKSGLFRYADGVDKFLLLLGSLGSIGDGLTTPLTMLVLSGMINQYSRSNPNTFSNQVVDK
        MG KK+G+FRYAD VD  L++LG LGSIGDGLTTPLTMLVLSGMIN YS S+ N+FSN VVDK
Subjt:  MGMKKSGLFRYADGVDKFLLLLGSLGSIGDGLTTPLTMLVLSGMINQYSRSNPNTFSNQVVDK

A0A5D3CUV1 Putative multidrug resistance protein5.1e-1776.19Show/hide
Query:  MGMKKSGLFRYADGVDKFLLLLGSLGSIGDGLTTPLTMLVLSGMINQYSRSNPNTFSNQVVDK
        MG KK+G+FRYAD VD  L++LG LGSIGDGLTTPLTMLVLSGMIN YS S+ N+FSN VVDK
Subjt:  MGMKKSGLFRYADGVDKFLLLLGSLGSIGDGLTTPLTMLVLSGMINQYSRSNPNTFSNQVVDK

A0A6J1DD49 ABC transporter B family member 15-like5.1e-2598.41Show/hide
Query:  MGMKKSGLFRYADGVDKFLLLLGSLGSIGDGLTTPLTMLVLSGMINQYSRSNPNTFSNQVVDK
        MGMKKSGLFRYADGVDKFLLLLGSLGSIGDGLTTPLTMLVLSGMINQYSRSNPNT SNQVVDK
Subjt:  MGMKKSGLFRYADGVDKFLLLLGSLGSIGDGLTTPLTMLVLSGMINQYSRSNPNTFSNQVVDK

SwissProt top hitse value%identityAlignment
O80725 ABC transporter B family member 46.2e-0443.75Show/hide
Query:  LFRYADGVDKFLLLLGSLGSIGDGLTTPLTMLVLSGMINQYSRSNPNT
        LF +AD  D  L++LG+LGSIG+GL  PL  L+   +I+ +  +  NT
Subjt:  LFRYADGVDKFLLLLGSLGSIGDGLTTPLTMLVLSGMINQYSRSNPNT

Q9FWX8 ABC transporter B family member 129.5e-0540.35Show/hide
Query:  LFRYADGVDKFLLLLGSLGSIGDGLTTPLTMLVLSGMINQYSRSNPNTFSNQVVDKV
        LF +AD  D FL++ GSLG+IG+G+  PL  L+   +I+ + ++  N     VV KV
Subjt:  LFRYADGVDKFLLLLGSLGSIGDGLTTPLTMLVLSGMINQYSRSNPNTFSNQVVDKV

Q9LHD1 ABC transporter B family member 151.5e-0547.92Show/hide
Query:  LFRYADGVDKFLLLLGSLGSIGDGLTTPLTMLVLSGMINQYSRSNPNT
        +F +ADGVD  L+ LG +G++GDG TTPL +L+ S ++N    S+ NT
Subjt:  LFRYADGVDKFLLLLGSLGSIGDGLTTPLTMLVLSGMINQYSRSNPNT

Q9LHK4 Putative ABC transporter B family member 81.2e-0442Show/hide
Query:  LFRYADGVDKFLLLLGSLGSIGDGLTTPLTMLVLSGMINQ--YSRSNPNT
        +FR+AD +D  L++LGS+G+IGDG++T ++++ +S ++N   YS+ NP++
Subjt:  LFRYADGVDKFLLLLGSLGSIGDGLTTPLTMLVLSGMINQ--YSRSNPNT

Q9LSJ6 ABC transporter B family member 171.6e-0436.67Show/hide
Query:  LFRYADGVDKFLLLLGSLGSIGDGLTTPLTMLVLSGMINQY--SRSNPNTFSNQVVDKVL
        +F +ADGVD  L+ LG +G++GDG  TP+ + + + ++N    S SN  TF   +   V+
Subjt:  LFRYADGVDKFLLLLGSLGSIGDGLTTPLTMLVLSGMINQY--SRSNPNTFSNQVVDKVL

Arabidopsis top hitse value%identityAlignment
AT1G02520.1 P-glycoprotein 119.8e-0535.09Show/hide
Query:  LFRYADGVDKFLLLLGSLGSIGDGLTTPLTMLVLSGMINQYSRSNPNTFSNQVVDKV
        LF +AD  D  L++ GS+G+IG+G++ P   L+   +I+ + ++  N     VV KV
Subjt:  LFRYADGVDKFLLLLGSLGSIGDGLTTPLTMLVLSGMINQYSRSNPNTFSNQVVDKV

AT1G02530.1 P-glycoprotein 126.8e-0640.35Show/hide
Query:  LFRYADGVDKFLLLLGSLGSIGDGLTTPLTMLVLSGMINQYSRSNPNTFSNQVVDKV
        LF +AD  D FL++ GSLG+IG+G+  PL  L+   +I+ + ++  N     VV KV
Subjt:  LFRYADGVDKFLLLLGSLGSIGDGLTTPLTMLVLSGMINQYSRSNPNTFSNQVVDKV

AT2G47000.1 ATP binding cassette subfamily B44.4e-0543.75Show/hide
Query:  LFRYADGVDKFLLLLGSLGSIGDGLTTPLTMLVLSGMINQYSRSNPNT
        LF +AD  D  L++LG+LGSIG+GL  PL  L+   +I+ +  +  NT
Subjt:  LFRYADGVDKFLLLLGSLGSIGDGLTTPLTMLVLSGMINQYSRSNPNT

AT3G28345.1 ABC transporter family protein1.0e-0647.92Show/hide
Query:  LFRYADGVDKFLLLLGSLGSIGDGLTTPLTMLVLSGMINQYSRSNPNT
        +F +ADGVD  L+ LG +G++GDG TTPL +L+ S ++N    S+ NT
Subjt:  LFRYADGVDKFLLLLGSLGSIGDGLTTPLTMLVLSGMINQYSRSNPNT

AT3G28380.1 P-glycoprotein 171.2e-0536.67Show/hide
Query:  LFRYADGVDKFLLLLGSLGSIGDGLTTPLTMLVLSGMINQY--SRSNPNTFSNQVVDKVL
        +F +ADGVD  L+ LG +G++GDG  TP+ + + + ++N    S SN  TF   +   V+
Subjt:  LFRYADGVDKFLLLLGSLGSIGDGLTTPLTMLVLSGMINQY--SRSNPNTFSNQVVDKVL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCATGAAGAAAAGTGGCCTTTTCAGATATGCTGATGGGGTTGATAAGTTTCTGCTTTTATTGGGTTCTTTGGGGAGCATTGGAGATGGGCTTACAACCCCACTCAC
TATGCTTGTTCTTAGTGGTATGATCAATCAGTATTCTCGCTCTAATCCTAACACTTTTTCCAATCAAGTGGTGGACAAGGTACTT
mRNA sequenceShow/hide mRNA sequence
ATGGGCATGAAGAAAAGTGGCCTTTTCAGATATGCTGATGGGGTTGATAAGTTTCTGCTTTTATTGGGTTCTTTGGGGAGCATTGGAGATGGGCTTACAACCCCACTCAC
TATGCTTGTTCTTAGTGGTATGATCAATCAGTATTCTCGCTCTAATCCTAACACTTTTTCCAATCAAGTGGTGGACAAGGTACTT
Protein sequenceShow/hide protein sequence
MGMKKSGLFRYADGVDKFLLLLGSLGSIGDGLTTPLTMLVLSGMINQYSRSNPNTFSNQVVDKVL