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MS015016 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015016
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description30S ribosomal protein S2, chloroplastic
Genome locationscaffold2:582977..583078
RNA-Seq ExpressionMS015016
SyntenyMS015016
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0008777 - acetylornithine deacetylase activity (molecular function)
InterPro domainsIPR023591 - Ribosomal protein S2, flavodoxin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AES82729.2 30S ribosomal protein S2 [Medicago truncatula]1.1e-0685.29Show/hide
Query:  YLGRIKYMIGLPDIVIIVDQQEEYQTLQECINVG
        YLG IKYMIGLPDIVIIVDQQEEY  LQECI +G
Subjt:  YLGRIKYMIGLPDIVIIVDQQEEYQTLQECINVG
CUR01333.1 rps2 [Acacia cerastes]1.5e-0682.35Show/hide
Query:  YLGRIKYMIGLPDIVIIVDQQEEYQTLQECINVG
        Y+G I+YM GLPDIVIIVDQQEEY TLQECI VG
Subjt:  YLGRIKYMIGLPDIVIIVDQQEEYQTLQECINVG
EEF47920.1 30S ribosomal protein S2, putative [Ricinus communis]6.7e-0782.35Show/hide
Query:  YLGRIKYMIGLPDIVIIVDQQEEYQTLQECINVG
        YLGRIKYM+GLPDIVIIVDQQE+Y TL+ECI +G
Subjt:  YLGRIKYMIGLPDIVIIVDQQEEYQTLQECINVG
QSJ48527.1 ribosomal protein S2 [Medicago praecox]1.1e-0685.29Show/hide
Query:  YLGRIKYMIGLPDIVIIVDQQEEYQTLQECINVG
        YLG IKYM GLPDIVIIVDQQEEY TLQECI +G
Subjt:  YLGRIKYMIGLPDIVIIVDQQEEYQTLQECINVG
RHN49497.1 30S ribosomal protein S2 [Medicago truncatula]1.1e-0685.29Show/hide
Query:  YLGRIKYMIGLPDIVIIVDQQEEYQTLQECINVG
        YLG IKYMIGLPDIVIIVDQQEEY  LQECI +G
Subjt:  YLGRIKYMIGLPDIVIIVDQQEEYQTLQECINVG
TrEMBL top hitse value%identityAlignment
A0A1D0C3S2 30S ribosomal protein S2, chloroplastic7.2e-0782.35Show/hide
Query:  YLGRIKYMIGLPDIVIIVDQQEEYQTLQECINVG
        Y+G I+YM GLPDIVIIVDQQEEY TLQECI VG
Subjt:  YLGRIKYMIGLPDIVIIVDQQEEYQTLQECINVG
A0A1D0CBF1 30S ribosomal protein S2, chloroplastic9.4e-0782.35Show/hide
Query:  YLGRIKYMIGLPDIVIIVDQQEEYQTLQECINVG
        Y+G I+YM GLPDIVIIVDQQEEY TLQECI VG
Subjt:  YLGRIKYMIGLPDIVIIVDQQEEYQTLQECINVG
A0A396HF21 30S ribosomal protein S25.5e-0785.29Show/hide
Query:  YLGRIKYMIGLPDIVIIVDQQEEYQTLQECINVG
        YLG IKYMIGLPDIVIIVDQQEEY  LQECI +G
Subjt:  YLGRIKYMIGLPDIVIIVDQQEEYQTLQECINVG
B9RL05 30S ribosomal protein S2, putative3.2e-0782.35Show/hide
Query:  YLGRIKYMIGLPDIVIIVDQQEEYQTLQECINVG
        YLGRIKYM+GLPDIVIIVDQQE+Y TL+ECI +G
Subjt:  YLGRIKYMIGLPDIVIIVDQQEEYQTLQECINVG
G7L305 30S ribosomal protein S25.5e-0785.29Show/hide
Query:  YLGRIKYMIGLPDIVIIVDQQEEYQTLQECINVG
        YLG IKYMIGLPDIVIIVDQQEEY  LQECI +G
Subjt:  YLGRIKYMIGLPDIVIIVDQQEEYQTLQECINVG
SwissProt top hitse value%identityAlignment
A4GYP7 30S ribosomal protein S2, chloroplastic4.4e-0982.35Show/hide
Query:  YLGRIKYMIGLPDIVIIVDQQEEYQTLQECINVG
        YLG IKYM GLPDIVIIVDQQEEY  LQECI +G
Subjt:  YLGRIKYMIGLPDIVIIVDQQEEYQTLQECINVG
Q14FG8 30S ribosomal protein S2, chloroplastic4.4e-0982.35Show/hide
Query:  YLGRIKYMIGLPDIVIIVDQQEEYQTLQECINVG
        YLG IKYM GLPDIVIIVDQQEEY  LQECI +G
Subjt:  YLGRIKYMIGLPDIVIIVDQQEEYQTLQECINVG
Q49L09 30S ribosomal protein S2, chloroplastic1.7e-0879.41Show/hide
Query:  YLGRIKYMIGLPDIVIIVDQQEEYQTLQECINVG
        YLG IKYM GLPDIVIIVDQQEEY  L+ECI +G
Subjt:  YLGRIKYMIGLPDIVIIVDQQEEYQTLQECINVG
Q4VZP4 30S ribosomal protein S2, chloroplastic3.3e-0982.35Show/hide
Query:  YLGRIKYMIGLPDIVIIVDQQEEYQTLQECINVG
        YLG IKYM GLPDIVIIVDQQEEY+ LQECI +G
Subjt:  YLGRIKYMIGLPDIVIIVDQQEEYQTLQECINVG
Q9BBS6 30S ribosomal protein S2, chloroplastic1.7e-0879.41Show/hide
Query:  YLGRIKYMIGLPDIVIIVDQQEEYQTLQECINVG
        YLG IKYM GLPDIVIIVDQQEEY  L+ECI +G
Subjt:  YLGRIKYMIGLPDIVIIVDQQEEYQTLQECINVG
Arabidopsis top hitse value%identityAlignment
ATCG00160.1 ribosomal protein S22.6e-0976.47Show/hide
Query:  YLGRIKYMIGLPDIVIIVDQQEEYQTLQECINVG
        YLG IKYM GLPDIVII+DQQEEY  L+ECI +G
Subjt:  YLGRIKYMIGLPDIVIIVDQQEEYQTLQECINVG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TATCTTGGCAGAATTAAATATATGATAGGGTTACCCGATATTGTAATAATCGTTGATCAGCAAGAAGAATATCAAACTCTTCAAGAATGTATCAACGTTGGG
mRNA sequenceShow/hide mRNA sequence
TATCTTGGCAGAATTAAATATATGATAGGGTTACCCGATATTGTAATAATCGTTGATCAGCAAGAAGAATATCAAACTCTTCAAGAATGTATCAACGTTGGG
Protein sequenceShow/hide protein sequence
YLGRIKYMIGLPDIVIIVDQQEEYQTLQECINVG