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MS015033 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015033
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptioncyclin-dependent protein kinase inhibitor SMR6-like
Genome locationscaffold2:716402..716725
RNA-Seq ExpressionMS015033
SyntenyMS015033
Gene Ontology termsGO:0032875 - regulation of DNA endoreduplication (biological process)
GO:0045839 - negative regulation of mitotic nuclear division (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsIPR040389 - Cyclin-dependent protein kinase inhibitor SMR


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034281.1 hypothetical protein E6C27_scaffold65G002800 [Cucumis melo var. makuwa]5.7e-3675.26Show/hide
Query:  MGLESDPKKWVVAGIQIRPPLMPICTNPIHKEHDHCDADDHPPTPTGDDCRIRSGSKCPPAPKKPKSSLKFNYGRVGQFFKPPDLEVVFSRHVERAN
        MG E DP+KWV+ GIQ+RPPL+      I+KEH+HCD +D PPTPTGD+CRIRSGSKCPPAPKKPKSSLKFN+  + QFFKPPDLEVVFSRHVERAN
Subjt:  MGLESDPKKWVVAGIQIRPPLMPICTNPIHKEHDHCDADDHPPTPTGDDCRIRSGSKCPPAPKKPKSSLKFNYGRVGQFFKPPDLEVVFSRHVERAN

KAE8648709.1 hypothetical protein Csa_009216 [Cucumis sativus]8.6e-3270.1Show/hide
Query:  FGRNFKTIDMGLESDPKKWVVAGIQIRPPLMPICTNPIHKEHDHCDADDHPPTPTGDDCRIRSGSKCPPAPKKPKSSLKFNYGRVGQFFKPPDLEVV
        F  NF+  DMG E DP+KWV+ GIQ+RPPL+      I+KEH HCD +D PPTPTGD+CRI SGSKCPPAPKKPKSSLKFN+G V QFFKPPDLE+V
Subjt:  FGRNFKTIDMGLESDPKKWVVAGIQIRPPLMPICTNPIHKEHDHCDADDHPPTPTGDDCRIRSGSKCPPAPKKPKSSLKFNYGRVGQFFKPPDLEVV

KAG6601529.1 Cyclin-dependent protein kinase inhibitor SMR8, partial [Cucurbita argyrosperma subsp. sororia]4.5e-4181.44Show/hide
Query:  MGLESDPKKWVVAGIQIRPPLMPICTNPIHKEHDHCDADDHPPTPTGDDCRIRSGSKCPPAPKKPKSSLKFNYGRVGQFFKPPDLEVVFSRHVERAN
        MG + DP+KWV+ GIQ RPPL+PI TNPIHKE DHCD +D PPTPTGDDCRIRSGSKCPPAPKK KSS+KFN+G V QFFKPPDLEVVFSRHVERAN
Subjt:  MGLESDPKKWVVAGIQIRPPLMPICTNPIHKEHDHCDADDHPPTPTGDDCRIRSGSKCPPAPKKPKSSLKFNYGRVGQFFKPPDLEVVFSRHVERAN

XP_022775596.1 cyclin-dependent protein kinase inhibitor SMR6-like [Durio zibethinus]1.7e-2457.69Show/hide
Query:  IDMGLESDPKKWVVAGIQIRPPLMPICTNPIHKEHDHCDADDH-----PPTPTGDDCRIRSGSKCPPAPKKPKSSLKFNYGRVGQFFKPPDLEVVFSRHV
        +D GLES+ KKWV+AGI +RP L P+ T P+ KE D   +D         TPTG+D RI +   CPPAP+KPK SLK NYG V +FF PPDLE VF RHV
Subjt:  IDMGLESDPKKWVVAGIQIRPPLMPICTNPIHKEHDHCDADDH-----PPTPTGDDCRIRSGSKCPPAPKKPKSSLKFNYGRVGQFFKPPDLEVVFSRHV

Query:  ERAN
        ERAN
Subjt:  ERAN

XP_022957284.1 cyclin-dependent protein kinase inhibitor SMR6-like [Cucurbita moschata]1.3e-4076.42Show/hide
Query:  FGRNFKTIDMGLESDPKKWVVAGIQIRPPLMPICTNPIHKEHDHCDADDHPPTPTGDDCRIRSGSKCPPAPKKPKSSLKFNYGRVGQFFKPPDLEVVFSR
        F  NF+   MG + DP+KWV+ GIQ RPPL+PI TN IHKE DHCD +D PPTPTGDDCRIRSGSKCPPAPKK KSS+KFN+G V QFFKPPDLEVVFSR
Subjt:  FGRNFKTIDMGLESDPKKWVVAGIQIRPPLMPICTNPIHKEHDHCDADDHPPTPTGDDCRIRSGSKCPPAPKKPKSSLKFNYGRVGQFFKPPDLEVVFSR

Query:  HVERAN
        HVERAN
Subjt:  HVERAN

TrEMBL top hitse value%identityAlignment
A0A0A0KVI5 Uncharacterized protein4.2e-3270.1Show/hide
Query:  FGRNFKTIDMGLESDPKKWVVAGIQIRPPLMPICTNPIHKEHDHCDADDHPPTPTGDDCRIRSGSKCPPAPKKPKSSLKFNYGRVGQFFKPPDLEVV
        F  NF+  DMG E DP+KWV+ GIQ+RPPL+      I+KEH HCD +D PPTPTGD+CRI SGSKCPPAPKKPKSSLKFN+G V QFFKPPDLE+V
Subjt:  FGRNFKTIDMGLESDPKKWVVAGIQIRPPLMPICTNPIHKEHDHCDADDHPPTPTGDDCRIRSGSKCPPAPKKPKSSLKFNYGRVGQFFKPPDLEVV

A0A2P2IWJ2 Uncharacterized protein4.6e-2356.57Show/hide
Query:  IDMGLESDPKKWVVAGIQIRPPLMPICTNPIHKEHDHCDADDHPPTPTGDDCRIRSGSKCPPAPKKPKSSLKFNYGRVGQFFKPPDLEVVFSRHVERAN
        +D GLE D KKWV+AGI +R PL PI TNP+ K+    ++++   TPTG++ RI + S CPPAP+K K++LK NY  V +FF PPDLE VF RHVERAN
Subjt:  IDMGLESDPKKWVVAGIQIRPPLMPICTNPIHKEHDHCDADDHPPTPTGDDCRIRSGSKCPPAPKKPKSSLKFNYGRVGQFFKPPDLEVVFSRHVERAN

A0A5A7SXV2 Uncharacterized protein2.8e-3675.26Show/hide
Query:  MGLESDPKKWVVAGIQIRPPLMPICTNPIHKEHDHCDADDHPPTPTGDDCRIRSGSKCPPAPKKPKSSLKFNYGRVGQFFKPPDLEVVFSRHVERAN
        MG E DP+KWV+ GIQ+RPPL+      I+KEH+HCD +D PPTPTGD+CRIRSGSKCPPAPKKPKSSLKFN+  + QFFKPPDLEVVFSRHVERAN
Subjt:  MGLESDPKKWVVAGIQIRPPLMPICTNPIHKEHDHCDADDHPPTPTGDDCRIRSGSKCPPAPKKPKSSLKFNYGRVGQFFKPPDLEVVFSRHVERAN

A0A6J1H1H9 cyclin-dependent protein kinase inhibitor SMR6-like6.4e-4176.42Show/hide
Query:  FGRNFKTIDMGLESDPKKWVVAGIQIRPPLMPICTNPIHKEHDHCDADDHPPTPTGDDCRIRSGSKCPPAPKKPKSSLKFNYGRVGQFFKPPDLEVVFSR
        F  NF+   MG + DP+KWV+ GIQ RPPL+PI TN IHKE DHCD +D PPTPTGDDCRIRSGSKCPPAPKK KSS+KFN+G V QFFKPPDLEVVFSR
Subjt:  FGRNFKTIDMGLESDPKKWVVAGIQIRPPLMPICTNPIHKEHDHCDADDHPPTPTGDDCRIRSGSKCPPAPKKPKSSLKFNYGRVGQFFKPPDLEVVFSR

Query:  HVERAN
        HVERAN
Subjt:  HVERAN

A0A6P6BEQ4 cyclin-dependent protein kinase inhibitor SMR6-like8.4e-2557.69Show/hide
Query:  IDMGLESDPKKWVVAGIQIRPPLMPICTNPIHKEHDHCDADDH-----PPTPTGDDCRIRSGSKCPPAPKKPKSSLKFNYGRVGQFFKPPDLEVVFSRHV
        +D GLES+ KKWV+AGI +RP L P+ T P+ KE D   +D         TPTG+D RI +   CPPAP+KPK SLK NYG V +FF PPDLE VF RHV
Subjt:  IDMGLESDPKKWVVAGIQIRPPLMPICTNPIHKEHDHCDADDH-----PPTPTGDDCRIRSGSKCPPAPKKPKSSLKFNYGRVGQFFKPPDLEVVFSRHV

Query:  ERAN
        ERAN
Subjt:  ERAN

SwissProt top hitse value%identityAlignment
Q1G3Y4 Cyclin-dependent protein kinase inhibitor SMR151.6e-0943.53Show/hide
Query:  SDPKKWVVAGIQIRPPLMPICTNPIHKEHDHCDADDHPPTPTGDDCRIRSGSKCPPAPKKPKSSLKFNYGRVGQFFKPPDLEVVF
        ++ KK V+ GI +   + PI  +     +   D D  P TPT D  RI +   CPPAPKK K +LK +YG   +FF PPDLE VF
Subjt:  SDPKKWVVAGIQIRPPLMPICTNPIHKEHDHCDADDHPPTPTGDDCRIRSGSKCPPAPKKPKSSLKFNYGRVGQFFKPPDLEVVF

Q29Q81 Cyclin-dependent protein kinase inhibitor SMR65.1e-1141.41Show/hide
Query:  GLESDPKKWVVAGIQIRPPLMPICT------NPIHKEHDHC--DADDHPPTPTGDDCRIRSGSKCPPAPKKPKSSLKFNYGRVGQFFKPP-DLEVVFSR
        GLESD KKWV+AGI IR  L P+ T        + +  + C  + ++   TPT  + +I    +CPPAP+K + +LK     V +FF PP DLE VF R
Subjt:  GLESDPKKWVVAGIQIRPPLMPICT------NPIHKEHDHC--DADDHPPTPTGDDCRIRSGSKCPPAPKKPKSSLKFNYGRVGQFFKPP-DLEVVFSR

Q9SAD3 Cyclin-dependent protein kinase inhibitor SMR88.7e-1144.68Show/hide
Query:  SDPKKWVVAGIQIRPPLMPICTNPIHKEHDHCDADDHPPTPTGDDCRIRSGSKCPPAPKKPKSSLKFNYGRVGQ-FFKPPDLEVVFSRHVERAN
        +D KKWV+AGI  R PL  I  +P     +  + D  P TPT    RI     CP APKK K SLK +Y  V + +F PPDLE VF   ++RA+
Subjt:  SDPKKWVVAGIQIRPPLMPICTNPIHKEHDHCDADDHPPTPTGDDCRIRSGSKCPPAPKKPKSSLKFNYGRVGQ-FFKPPDLEVVFSRHVERAN

Arabidopsis top hitse value%identityAlignment
AT1G10690.1 unknown protein6.2e-1244.68Show/hide
Query:  SDPKKWVVAGIQIRPPLMPICTNPIHKEHDHCDADDHPPTPTGDDCRIRSGSKCPPAPKKPKSSLKFNYGRVGQ-FFKPPDLEVVFSRHVERAN
        +D KKWV+AGI  R PL  I  +P     +  + D  P TPT    RI     CP APKK K SLK +Y  V + +F PPDLE VF   ++RA+
Subjt:  SDPKKWVVAGIQIRPPLMPICTNPIHKEHDHCDADDHPPTPTGDDCRIRSGSKCPPAPKKPKSSLKFNYGRVGQ-FFKPPDLEVVFSRHVERAN

AT1G60783.1 unknown protein1.2e-1043.53Show/hide
Query:  SDPKKWVVAGIQIRPPLMPICTNPIHKEHDHCDADDHPPTPTGDDCRIRSGSKCPPAPKKPKSSLKFNYGRVGQFFKPPDLEVVF
        ++ KK V+ GI +   + PI  +     +   D D  P TPT D  RI +   CPPAPKK K +LK +YG   +FF PPDLE VF
Subjt:  SDPKKWVVAGIQIRPPLMPICTNPIHKEHDHCDADDHPPTPTGDDCRIRSGSKCPPAPKKPKSSLKFNYGRVGQFFKPPDLEVVF

AT5G40460.1 unknown protein3.6e-1241.41Show/hide
Query:  GLESDPKKWVVAGIQIRPPLMPICT------NPIHKEHDHC--DADDHPPTPTGDDCRIRSGSKCPPAPKKPKSSLKFNYGRVGQFFKPP-DLEVVFSR
        GLESD KKWV+AGI IR  L P+ T        + +  + C  + ++   TPT  + +I    +CPPAP+K + +LK     V +FF PP DLE VF R
Subjt:  GLESDPKKWVVAGIQIRPPLMPICT------NPIHKEHDHC--DADDHPPTPTGDDCRIRSGSKCPPAPKKPKSSLKFNYGRVGQFFKPP-DLEVVFSR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGGGACTTTGGGAGAAATTTCAAGACGATCGATATGGGCTTGGAATCCGACCCCAAAAAATGGGTCGTCGCCGGAATTCAGATACGACCTCCTCTAATGCCCATTTGCAC
AAATCCCATTCACAAAGAACACGACCACTGCGACGCCGACGACCACCCACCGACGCCGACCGGAGACGACTGCCGGATCCGGTCCGGTTCGAAATGCCCGCCCGCCCCGA
AGAAGCCAAAATCTTCCCTTAAATTTAACTACGGCAGAGTTGGGCAGTTCTTCAAGCCACCAGACTTAGAGGTTGTCTTTAGTCGACATGTCGAGAGGGCTAAT
mRNA sequenceShow/hide mRNA sequence
TGGGACTTTGGGAGAAATTTCAAGACGATCGATATGGGCTTGGAATCCGACCCCAAAAAATGGGTCGTCGCCGGAATTCAGATACGACCTCCTCTAATGCCCATTTGCAC
AAATCCCATTCACAAAGAACACGACCACTGCGACGCCGACGACCACCCACCGACGCCGACCGGAGACGACTGCCGGATCCGGTCCGGTTCGAAATGCCCGCCCGCCCCGA
AGAAGCCAAAATCTTCCCTTAAATTTAACTACGGCAGAGTTGGGCAGTTCTTCAAGCCACCAGACTTAGAGGTTGTCTTTAGTCGACATGTCGAGAGGGCTAAT
Protein sequenceShow/hide protein sequence
WDFGRNFKTIDMGLESDPKKWVVAGIQIRPPLMPICTNPIHKEHDHCDADDHPPTPTGDDCRIRSGSKCPPAPKKPKSSLKFNYGRVGQFFKPPDLEVVFSRHVERAN