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MS015086 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015086
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptiontranscription factor PAR1-like
Genome locationscaffold2:1066774..1067046
RNA-Seq ExpressionMS015086
SyntenyMS015086
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
InterPro domainsIPR044549 - Transcription factor IBH1-like, bHLH domain
IPR044660 - Transcription factor IBH1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008446236.1 PREDICTED: uncharacterized protein LOC103489026 [Cucumis melo]4.1e-2777.78Show/hide
Query:  YYCVSSTDAKGIGIGKVKWQRRGRRGGRH-----GGGSVQMKMRKLQRLIPGGRGLKPDRLFLKTADYIMQLRSQVNVLQALSKIYEPTL
        YY +  ++    GIGKV+WQRRGRRGGRH     GGGSV MKMRKLQRLIPGGR LKPDRLFLKTADYIMQLRSQV+VLQALSKIY+PTL
Subjt:  YYCVSSTDAKGIGIGKVKWQRRGRRGGRH-----GGGSVQMKMRKLQRLIPGGRGLKPDRLFLKTADYIMQLRSQVNVLQALSKIYEPTL

XP_022151226.1 transcription factor PAR2 [Momordica charantia]1.6e-42100Show/hide
Query:  MEYYCVSSTDAKGIGIGKVKWQRRGRRGGRHGGGSVQMKMRKLQRLIPGGRGLKPDRLFLKTADYIMQLRSQVNVLQALSKIYEPTLISKY
        MEYYCVSSTDAKGIGIGKVKWQRRGRRGGRHGGGSVQMKMRKLQRLIPGGRGLKPDRLFLKTADYIMQLRSQVNVLQALSKIYEPTLISKY
Subjt:  MEYYCVSSTDAKGIGIGKVKWQRRGRRGGRHGGGSVQMKMRKLQRLIPGGRGLKPDRLFLKTADYIMQLRSQVNVLQALSKIYEPTLISKY

XP_022957171.1 transcription factor PAR2-like [Cucurbita moschata]5.4e-2776.92Show/hide
Query:  MEYYCVSSTDAKGIGIGKVKWQRRGRRGGRHGGGSVQMKMRKLQRLIPGGRGLKPDRLFLKTADYIMQLRSQVNVLQALSKIYEPTLISKY
        MEYY    T     GI KVKWQRRGRRGGRHGG SV MK+RKLQR+IPGGR LKPDRLFLKTADYIMQLRSQV+VL ALSKIY+P L S+Y
Subjt:  MEYYCVSSTDAKGIGIGKVKWQRRGRRGGRHGGGSVQMKMRKLQRLIPGGRGLKPDRLFLKTADYIMQLRSQVNVLQALSKIYEPTLISKY

XP_023513052.1 transcription factor PAR2-like [Cucurbita pepo subsp. pepo]9.2e-2778.89Show/hide
Query:  MEYYCVSSTDAKGIGIGKVKWQRRGRRGGRHGGG---SVQMKMRKLQRLIPGGRGLKPDRLFLKTADYIMQLRSQVNVLQALSKIYEPTL
        MEYY    T     GI KVKWQRRGRRGGRHGGG   SV MK+RKLQRLIPGGR LKPDRLFLKTADYIMQLRSQV+VLQALSKIY+P L
Subjt:  MEYYCVSSTDAKGIGIGKVKWQRRGRRGGRHGGG---SVQMKMRKLQRLIPGGRGLKPDRLFLKTADYIMQLRSQVNVLQALSKIYEPTL

XP_038891463.1 transcription factor PAR2 [Benincasa hispida]2.4e-2782.42Show/hide
Query:  MEYYCVSSTDAKGIGIGKVKWQRRGRRGGRHGGGSVQMKMRKLQRLIPGGRGLKPDRLFLKTADYIMQLRSQVNVLQALSKIYEPTLISKY
        MEYY  +S ++K  GIG VKWQRRGRRGGRH G SVQMKMRKLQRLIPGGR LKPDRLFLKTADYIMQLRSQV+VLQALSKIY+P L SKY
Subjt:  MEYYCVSSTDAKGIGIGKVKWQRRGRRGGRHGGGSVQMKMRKLQRLIPGGRGLKPDRLFLKTADYIMQLRSQVNVLQALSKIYEPTLISKY

TrEMBL top hitse value%identityAlignment
A0A0A0KQB4 Uncharacterized protein4.4e-2789.47Show/hide
Query:  GIGKVKWQRRGRRGGRH---GGGSVQMKMRKLQRLIPGGRGLKPDRLFLKTADYIMQLRSQVNVLQALSKIYEPTL
        GIGKV+WQRRGRRGGRH   GGGSV MKMRKLQRLIPGGR LKPDRLFLKTADYIMQLRSQV+VLQALSKIY+PTL
Subjt:  GIGKVKWQRRGRRGGRH---GGGSVQMKMRKLQRLIPGGRGLKPDRLFLKTADYIMQLRSQVNVLQALSKIYEPTL

A0A1S3BFE3 uncharacterized protein LOC1034890262.0e-2777.78Show/hide
Query:  YYCVSSTDAKGIGIGKVKWQRRGRRGGRH-----GGGSVQMKMRKLQRLIPGGRGLKPDRLFLKTADYIMQLRSQVNVLQALSKIYEPTL
        YY +  ++    GIGKV+WQRRGRRGGRH     GGGSV MKMRKLQRLIPGGR LKPDRLFLKTADYIMQLRSQV+VLQALSKIY+PTL
Subjt:  YYCVSSTDAKGIGIGKVKWQRRGRRGGRH-----GGGSVQMKMRKLQRLIPGGRGLKPDRLFLKTADYIMQLRSQVNVLQALSKIYEPTL

A0A6J1DDZ5 transcription factor PAR27.5e-43100Show/hide
Query:  MEYYCVSSTDAKGIGIGKVKWQRRGRRGGRHGGGSVQMKMRKLQRLIPGGRGLKPDRLFLKTADYIMQLRSQVNVLQALSKIYEPTLISKY
        MEYYCVSSTDAKGIGIGKVKWQRRGRRGGRHGGGSVQMKMRKLQRLIPGGRGLKPDRLFLKTADYIMQLRSQVNVLQALSKIYEPTLISKY
Subjt:  MEYYCVSSTDAKGIGIGKVKWQRRGRRGGRHGGGSVQMKMRKLQRLIPGGRGLKPDRLFLKTADYIMQLRSQVNVLQALSKIYEPTLISKY

A0A6J1GYH6 transcription factor PAR2-like2.6e-2776.92Show/hide
Query:  MEYYCVSSTDAKGIGIGKVKWQRRGRRGGRHGGGSVQMKMRKLQRLIPGGRGLKPDRLFLKTADYIMQLRSQVNVLQALSKIYEPTLISKY
        MEYY    T     GI KVKWQRRGRRGGRHGG SV MK+RKLQR+IPGGR LKPDRLFLKTADYIMQLRSQV+VL ALSKIY+P L S+Y
Subjt:  MEYYCVSSTDAKGIGIGKVKWQRRGRRGGRHGGGSVQMKMRKLQRLIPGGRGLKPDRLFLKTADYIMQLRSQVNVLQALSKIYEPTLISKY

A0A6J1IR24 uncharacterized protein LOC1114776744.9e-2680.68Show/hide
Query:  MEYYCVSSTDAKGIGIGKVKWQRRGRRGGRHGG-GSVQMKMRKLQRLIPGGRGLKPDRLFLKTADYIMQLRSQVNVLQALSKIYEPTL
        MEYY  +  +AK  GI KVKWQRRGRRGG HGG  SV MKMRKLQRLIPGGR LKPDRLFLKTADYIMQLRSQV+VLQALSKIY+P L
Subjt:  MEYYCVSSTDAKGIGIGKVKWQRRGRRGGRHGG-GSVQMKMRKLQRLIPGGRGLKPDRLFLKTADYIMQLRSQVNVLQALSKIYEPTL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G23965.1 unknown protein1.1e-0953.97Show/hide
Query:  QRRGRRGGRHGGGSVQMKMRKLQRLIPGGRGL-KPDRLFLKTADYIMQLRSQVNVLQALSKIY
        Q + + G   G GS+Q+KMRKL+ LIPGGR L +PD L  KTADYIM L  ++  L+A+S IY
Subjt:  QRRGRRGGRHGGGSVQMKMRKLQRLIPGGRGL-KPDRLFLKTADYIMQLRSQVNVLQALSKIY

AT1G70270.1 unknown protein1.5e-0648.28Show/hide
Query:  HGGGS----VQMKMRKLQRLIPGGRGLK-PDRLFLKTADYIMQLRSQVNVLQALSKIY
        HG GS    +QMK+R+LQ LIPGG+    PD L  KT DYI+ L+ ++  L+A+S++Y
Subjt:  HGGGS----VQMKMRKLQRLIPGGRGLK-PDRLFLKTADYIMQLRSQVNVLQALSKIY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATACTATTGTGTATCTTCAACCGACGCCAAAGGAATTGGGATTGGGAAGGTGAAGTGGCAGAGGAGGGGGAGGCGCGGCGGACGGCACGGCGGCGGCTCTGTGCA
GATGAAGATGAGGAAGCTGCAGCGGCTGATCCCCGGAGGGCGGGGGCTGAAGCCGGACCGCCTCTTCTTGAAAACGGCGGATTATATAATGCAATTGAGGTCTCAAGTTA
ATGTTTTGCAAGCACTTTCCAAGATTTACGAACCCACCCTAATTTCTAAATAT
mRNA sequenceShow/hide mRNA sequence
ATGGAATACTATTGTGTATCTTCAACCGACGCCAAAGGAATTGGGATTGGGAAGGTGAAGTGGCAGAGGAGGGGGAGGCGCGGCGGACGGCACGGCGGCGGCTCTGTGCA
GATGAAGATGAGGAAGCTGCAGCGGCTGATCCCCGGAGGGCGGGGGCTGAAGCCGGACCGCCTCTTCTTGAAAACGGCGGATTATATAATGCAATTGAGGTCTCAAGTTA
ATGTTTTGCAAGCACTTTCCAAGATTTACGAACCCACCCTAATTTCTAAATAT
Protein sequenceShow/hide protein sequence
MEYYCVSSTDAKGIGIGKVKWQRRGRRGGRHGGGSVQMKMRKLQRLIPGGRGLKPDRLFLKTADYIMQLRSQVNVLQALSKIYEPTLISKY