; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS015100 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015100
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprotein PLASTID REDOX INSENSITIVE 2, chloroplastic-like
Genome locationscaffold2:1141711..1142399
RNA-Seq ExpressionMS015100
SyntenyMS015100
Gene Ontology termsGO:0009642 - response to light intensity (biological process)
GO:0010468 - regulation of gene expression (biological process)
GO:0000427 - plastid-encoded plastid RNA polymerase complex (cellular component)
GO:0042646 - plastid nucleoid (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR039349 - Protein PLASTID REDOX INSENSITIVE 2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601374.1 Protein PLASTID REDOX INSENSITIVE 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]2.1e-6977.78Show/hide
Query:  WTIAPPLHLPPSLVTLKPSIIPLRFFPNPSAPLHRTRLSPTLNLPYPLPR----ERICRAAEYKFPDPIPEFAVAETEKFRAHLLNKLSKKDIYGDSVPE
        WT  P  HL P L  L     P  FF NPS+ L  TRLSPTL LP+         +ICRAAEYKFPDPIPEFAVAETEKFRAHLL KLSKKDIYGDSV E
Subjt:  WTIAPPLHLPPSLVTLKPSIIPLRFFPNPSAPLHRTRLSPTLNLPYPLPR----ERICRAAEYKFPDPIPEFAVAETEKFRAHLLNKLSKKDIYGDSVPE

Query:  VVGICTEIFNTFMHTEYGGPGTLLVVPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNEWTGDDGT
        VVG+CTEIFNTFMHTEYGGPGTLLV+PFIDMSDTINERGLPGGPQAARAAVKWAQ+HVDKDWN WTGDDGT
Subjt:  VVGICTEIFNTFMHTEYGGPGTLLVVPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNEWTGDDGT

KAG6601379.1 Protein PLASTID REDOX INSENSITIVE 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]7.3e-7077.91Show/hide
Query:  WTIAPPLHLPPSLVTLKPSIIPLRFFPNPSAPLHRTRLSPTLNLPYPLPR-----ERICRAAEYKFPDPIPEFAVAETEKFRAHLLNKLSKKDIYGDSVP
        WT  P  HL PSL  L     P  FF NPS+ L  TRLSPTL LP+          +ICRAAEYKFPDPIPEFAVAETEKFRAHLL KLSKKDIYGDSV 
Subjt:  WTIAPPLHLPPSLVTLKPSIIPLRFFPNPSAPLHRTRLSPTLNLPYPLPR-----ERICRAAEYKFPDPIPEFAVAETEKFRAHLLNKLSKKDIYGDSVP

Query:  EVVGICTEIFNTFMHTEYGGPGTLLVVPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNEWTGDDGT
        EVVG+CTEIFNTFMHTEYGGPGTLLV+PFIDMSDTINERGLPGGPQAARAAVKWAQ+HVDKDWN WTGDDGT
Subjt:  EVVGICTEIFNTFMHTEYGGPGTLLVVPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNEWTGDDGT

XP_022151247.1 protein PLASTID REDOX INSENSITIVE 2-like [Momordica charantia]5.5e-9498.82Show/hide
Query:  SIWTIAPPLHLPPSLVTLKPSIIPLRFFPNPSAPLHRTRLSPTLNLPYPLPRERICRAAEYKFPDPIPEFAVAETEKFRAHLLNKLSKKDIYGDSVPEVV
        SIWTIAPPLHLPPSLVTLKPSIIPLRFFPNPSAPLHRTRLSPTLNLPYPLP ERICRAAEYKFPDPIPEFAVAETEKFRAHLLNKLSKKD+YGDSVPEVV
Subjt:  SIWTIAPPLHLPPSLVTLKPSIIPLRFFPNPSAPLHRTRLSPTLNLPYPLPRERICRAAEYKFPDPIPEFAVAETEKFRAHLLNKLSKKDIYGDSVPEVV

Query:  GICTEIFNTFMHTEYGGPGTLLVVPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNEWTGDDGT
        GICTEIFNTFMHTEYGGPGTLLVVPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNEWTGDDGT
Subjt:  GICTEIFNTFMHTEYGGPGTLLVVPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNEWTGDDGT

XP_022956596.1 protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like [Cucurbita moschata]2.1e-6977.78Show/hide
Query:  WTIAPPLHLPPSLVTLKPSIIPLRFFPNPSAPLHRTRLSPTLNLPYPLPR----ERICRAAEYKFPDPIPEFAVAETEKFRAHLLNKLSKKDIYGDSVPE
        WT  P  HL P L  L     P  FF NPS+ L  TRLSPTL LP+         +ICRAAEYKFPDPIPEFAVAETEKFRAHLL KLSKKDIYGDSV E
Subjt:  WTIAPPLHLPPSLVTLKPSIIPLRFFPNPSAPLHRTRLSPTLNLPYPLPR----ERICRAAEYKFPDPIPEFAVAETEKFRAHLLNKLSKKDIYGDSVPE

Query:  VVGICTEIFNTFMHTEYGGPGTLLVVPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNEWTGDDGT
        VVG+CTEIFNTFMHTEYGGPGTLLV+PFIDMSDTINERGLPGGPQAARAAVKWAQ+HVDKDWN WTGDDGT
Subjt:  VVGICTEIFNTFMHTEYGGPGTLLVVPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNEWTGDDGT

XP_022997795.1 protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like [Cucurbita maxima]2.1e-6977.65Show/hide
Query:  WTIAPPLHLPPSLVTLKPSIIPLRFFPNPSAPLHRTRLSPTLNLPYPLPR---ERICRAAEYKFPDPIPEFAVAETEKFRAHLLNKLSKKDIYGDSVPEV
        WT  P  HL P L  L     P  FF NPS+ L  TRLSPTL LP+        +ICRAAEYKFPDPIPEFA+AETEKFRAHLL KLSKKDIYGDSV EV
Subjt:  WTIAPPLHLPPSLVTLKPSIIPLRFFPNPSAPLHRTRLSPTLNLPYPLPR---ERICRAAEYKFPDPIPEFAVAETEKFRAHLLNKLSKKDIYGDSVPEV

Query:  VGICTEIFNTFMHTEYGGPGTLLVVPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNEWTGDDGT
        VG+CTEIFNTFMHTEYGGPGTLLV+PFIDMSDTINERGLPGGPQAARAAVKWAQ+HVDKDWN WTGDDGT
Subjt:  VGICTEIFNTFMHTEYGGPGTLLVVPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNEWTGDDGT

TrEMBL top hitse value%identityAlignment
A0A0A0KTS5 Uncharacterized protein2.2e-6476.79Show/hide
Query:  TIAPPLHLPPSLV--TLKPSIIPLRFFPNPSAPLHRTRLSPTLNLPYPLPRERICRAAEYKFPDPIPEFAVAETEKFRAHLLNKLSKKDIYGDSVPEVVG
        T +P  +L PSL     KPS+ P  F  NPS PL   RLSPTL LP       IC AAEYKFPDPIPEFAVAETEKFRAHLL KLSK+DIYGDS+ +VVG
Subjt:  TIAPPLHLPPSLV--TLKPSIIPLRFFPNPSAPLHRTRLSPTLNLPYPLPRERICRAAEYKFPDPIPEFAVAETEKFRAHLLNKLSKKDIYGDSVPEVVG

Query:  ICTEIFNTFMHTEYGGPGTLLVVPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNEWTGDDGT
        ICTEIFNTFMHTEYGGPGTLLV+PFIDMSD INERGLPGGPQAARAAVKWAQDHVDKDWN+WTGDD T
Subjt:  ICTEIFNTFMHTEYGGPGTLLVVPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNEWTGDDGT

A0A1S3BEL5 uncharacterized protein LOC1034890377.6e-6576.02Show/hide
Query:  WTIAPPLH-LPPSLVTLKPSIIPLRFFP-NPSAPLHRTRLSPTLNLPYPLPR--ERICRAAEYKFPDPIPEFAVAETEKFRAHLLNKLSKKDIYGDSVPE
        WT +P  + LPP   +     +PL FF  NPSAP    RLSPTL LP         IC AAEYKFPDPIPEFAVAETEKFRAHLL KLSKKDIYGDS+ +
Subjt:  WTIAPPLH-LPPSLVTLKPSIIPLRFFP-NPSAPLHRTRLSPTLNLPYPLPR--ERICRAAEYKFPDPIPEFAVAETEKFRAHLLNKLSKKDIYGDSVPE

Query:  VVGICTEIFNTFMHTEYGGPGTLLVVPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNEWTGDDGT
        VVGICTEIFNTFMHTEYGGPGTLLV+PFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWN+WTGDD T
Subjt:  VVGICTEIFNTFMHTEYGGPGTLLVVPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNEWTGDDGT

A0A6J1DCY7 protein PLASTID REDOX INSENSITIVE 2-like2.7e-9498.82Show/hide
Query:  SIWTIAPPLHLPPSLVTLKPSIIPLRFFPNPSAPLHRTRLSPTLNLPYPLPRERICRAAEYKFPDPIPEFAVAETEKFRAHLLNKLSKKDIYGDSVPEVV
        SIWTIAPPLHLPPSLVTLKPSIIPLRFFPNPSAPLHRTRLSPTLNLPYPLP ERICRAAEYKFPDPIPEFAVAETEKFRAHLLNKLSKKD+YGDSVPEVV
Subjt:  SIWTIAPPLHLPPSLVTLKPSIIPLRFFPNPSAPLHRTRLSPTLNLPYPLPRERICRAAEYKFPDPIPEFAVAETEKFRAHLLNKLSKKDIYGDSVPEVV

Query:  GICTEIFNTFMHTEYGGPGTLLVVPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNEWTGDDGT
        GICTEIFNTFMHTEYGGPGTLLVVPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNEWTGDDGT
Subjt:  GICTEIFNTFMHTEYGGPGTLLVVPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNEWTGDDGT

A0A6J1GWZ9 protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like1.0e-6977.78Show/hide
Query:  WTIAPPLHLPPSLVTLKPSIIPLRFFPNPSAPLHRTRLSPTLNLPYPLPR----ERICRAAEYKFPDPIPEFAVAETEKFRAHLLNKLSKKDIYGDSVPE
        WT  P  HL P L  L     P  FF NPS+ L  TRLSPTL LP+         +ICRAAEYKFPDPIPEFAVAETEKFRAHLL KLSKKDIYGDSV E
Subjt:  WTIAPPLHLPPSLVTLKPSIIPLRFFPNPSAPLHRTRLSPTLNLPYPLPR----ERICRAAEYKFPDPIPEFAVAETEKFRAHLLNKLSKKDIYGDSVPE

Query:  VVGICTEIFNTFMHTEYGGPGTLLVVPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNEWTGDDGT
        VVG+CTEIFNTFMHTEYGGPGTLLV+PFIDMSDTINERGLPGGPQAARAAVKWAQ+HVDKDWN WTGDDGT
Subjt:  VVGICTEIFNTFMHTEYGGPGTLLVVPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNEWTGDDGT

A0A6J1KAW7 protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like1.0e-6977.65Show/hide
Query:  WTIAPPLHLPPSLVTLKPSIIPLRFFPNPSAPLHRTRLSPTLNLPYPLPR---ERICRAAEYKFPDPIPEFAVAETEKFRAHLLNKLSKKDIYGDSVPEV
        WT  P  HL P L  L     P  FF NPS+ L  TRLSPTL LP+        +ICRAAEYKFPDPIPEFA+AETEKFRAHLL KLSKKDIYGDSV EV
Subjt:  WTIAPPLHLPPSLVTLKPSIIPLRFFPNPSAPLHRTRLSPTLNLPYPLPR---ERICRAAEYKFPDPIPEFAVAETEKFRAHLLNKLSKKDIYGDSVPEV

Query:  VGICTEIFNTFMHTEYGGPGTLLVVPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNEWTGDDGT
        VG+CTEIFNTFMHTEYGGPGTLLV+PFIDMSDTINERGLPGGPQAARAAVKWAQ+HVDKDWN WTGDDGT
Subjt:  VGICTEIFNTFMHTEYGGPGTLLVVPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNEWTGDDGT

SwissProt top hitse value%identityAlignment
B6UFC7 Protein PLASTID REDOX INSENSITIVE 2, chloroplastic3.8e-3749.08Show/hide
Query:  VTLKPSIIPLRFFPNPSAPLHRTRLSPTLNLPY----PLPRERICRAA------EYKFPDPIPEFAVAETEKFRAHLLNKL--SKKDIYGDSVPEVVGIC
        V L P ++PLR   +P+  +   + S ++ L      P   + +CR A      +YKFPDPIPEFA  ET KFR H+  +L   K+D +GD V E+V +C
Subjt:  VTLKPSIIPLRFFPNPSAPLHRTRLSPTLNLPY----PLPRERICRAA------EYKFPDPIPEFAVAETEKFRAHLLNKL--SKKDIYGDSVPEVVGIC

Query:  TEIFNTFMHTEYGGPGTLLVVPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNEWTGD
        TEI  TF+  +Y GPGTLLV PF+DM   I ERGLPG PQAARAA+ WA+ +VDKDW  WTG+
Subjt:  TEIFNTFMHTEYGGPGTLLVVPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNEWTGD

Q6H612 Protein PLASTID REDOX INSENSITIVE 2, chloroplastic3.4e-3848.73Show/hide
Query:  TLKPSIIPLRFFPNPSAPLHRTRLSPTLNLPYPLPRERICRAA------EYKFPDPIPEFAVAETEKFRAHLLNKLSKK--DIYGDSVPEVVGICTEIFN
        TL P ++ L    +PS+   R  +   L    P P + +CR A      +YKFPDPIPEFA  ET KF+ H++ +L +K  D +G+ V E+V +CTEI  
Subjt:  TLKPSIIPLRFFPNPSAPLHRTRLSPTLNLPYPLPRERICRAA------EYKFPDPIPEFAVAETEKFRAHLLNKLSKK--DIYGDSVPEVVGICTEIFN

Query:  TFMHTEYGGPGTLLVVPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNEWTGD
        TF+  +Y GPGTLLV PF+DM   I ERGLPG PQAARAA+ WA+ ++DKDW  WTG+
Subjt:  TFMHTEYGGPGTLLVVPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNEWTGD

Q9XIK0 Protein PLASTID REDOX INSENSITIVE 2, chloroplastic1.3e-5380.53Show/hide
Query:  ICRAAEYKFPDPIPEFAVAETEKFRAHLLNKLSKKDIYGDSVPEVVGICTEIFNTFMHTEYGGPGTLLVVPFIDMSDTINERGLPGGPQAARAAVKWAQD
        +CRAAEYKFPDPIPEFA AETEKFR H+LNKLSK+D++ DSV E+VG+CTEIF TF+ +EYGGPGTLLV+PFIDM+DT+NER LPGGPQAARAA+KWAQD
Subjt:  ICRAAEYKFPDPIPEFAVAETEKFRAHLLNKLSKKDIYGDSVPEVVGICTEIFNTFMHTEYGGPGTLLVVPFIDMSDTINERGLPGGPQAARAAVKWAQD

Query:  HVDKDWNEWTGDD
        HVDKDW EWTG D
Subjt:  HVDKDWNEWTGDD

Arabidopsis top hitse value%identityAlignment
AT1G10522.1 unknown protein9.2e-5580.53Show/hide
Query:  ICRAAEYKFPDPIPEFAVAETEKFRAHLLNKLSKKDIYGDSVPEVVGICTEIFNTFMHTEYGGPGTLLVVPFIDMSDTINERGLPGGPQAARAAVKWAQD
        +CRAAEYKFPDPIPEFA AETEKFR H+LNKLSK+D++ DSV E+VG+CTEIF TF+ +EYGGPGTLLV+PFIDM+DT+NER LPGGPQAARAA+KWAQD
Subjt:  ICRAAEYKFPDPIPEFAVAETEKFRAHLLNKLSKKDIYGDSVPEVVGICTEIFNTFMHTEYGGPGTLLVVPFIDMSDTINERGLPGGPQAARAAVKWAQD

Query:  HVDKDWNEWTGDD
        HVDKDW EWTG D
Subjt:  HVDKDWNEWTGDD

AT1G10522.2 unknown protein9.2e-5580.53Show/hide
Query:  ICRAAEYKFPDPIPEFAVAETEKFRAHLLNKLSKKDIYGDSVPEVVGICTEIFNTFMHTEYGGPGTLLVVPFIDMSDTINERGLPGGPQAARAAVKWAQD
        +CRAAEYKFPDPIPEFA AETEKFR H+LNKLSK+D++ DSV E+VG+CTEIF TF+ +EYGGPGTLLV+PFIDM+DT+NER LPGGPQAARAA+KWAQD
Subjt:  ICRAAEYKFPDPIPEFAVAETEKFRAHLLNKLSKKDIYGDSVPEVVGICTEIFNTFMHTEYGGPGTLLVVPFIDMSDTINERGLPGGPQAARAAVKWAQD

Query:  HVDKDWNEWTGDD
        HVDKDW EWTG D
Subjt:  HVDKDWNEWTGDD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCCATATGGACTATAGCTCCTCCCCTCCATCTCCCTCCTTCTCTCGTTACGCTAAAACCCTCCATCATTCCACTACGCTTCTTCCCCAATCCTTCTGCTCCTCTCCACCG
TACACGTCTCTCGCCTACCCTCAACCTTCCATATCCACTGCCCAGAGAGCGCATTTGCAGGGCCGCCGAATACAAATTTCCGGATCCAATTCCCGAATTTGCCGTCGCTG
AGACGGAGAAATTCAGGGCCCATCTCCTCAACAAGCTCTCTAAAAAGGATATATACGGGGATTCGGTTCCAGAGGTCGTCGGAATATGCACCGAGATATTCAACACCTTT
ATGCACACCGAGTATGGTGGCCCTGGGACTTTGTTGGTCGTACCTTTCATCGACATGTCTGATACCATAAACGAACGAGGATTACCTGGAGGACCGCAAGCTGCTCGTGC
TGCAGTAAAATGGGCTCAAGATCATGTTGATAAAGACTGGAACGAGTGGACTGGTGATGATGGAACC
mRNA sequenceShow/hide mRNA sequence
TCCATATGGACTATAGCTCCTCCCCTCCATCTCCCTCCTTCTCTCGTTACGCTAAAACCCTCCATCATTCCACTACGCTTCTTCCCCAATCCTTCTGCTCCTCTCCACCG
TACACGTCTCTCGCCTACCCTCAACCTTCCATATCCACTGCCCAGAGAGCGCATTTGCAGGGCCGCCGAATACAAATTTCCGGATCCAATTCCCGAATTTGCCGTCGCTG
AGACGGAGAAATTCAGGGCCCATCTCCTCAACAAGCTCTCTAAAAAGGATATATACGGGGATTCGGTTCCAGAGGTCGTCGGAATATGCACCGAGATATTCAACACCTTT
ATGCACACCGAGTATGGTGGCCCTGGGACTTTGTTGGTCGTACCTTTCATCGACATGTCTGATACCATAAACGAACGAGGATTACCTGGAGGACCGCAAGCTGCTCGTGC
TGCAGTAAAATGGGCTCAAGATCATGTTGATAAAGACTGGAACGAGTGGACTGGTGATGATGGAACC
Protein sequenceShow/hide protein sequence
SIWTIAPPLHLPPSLVTLKPSIIPLRFFPNPSAPLHRTRLSPTLNLPYPLPRERICRAAEYKFPDPIPEFAVAETEKFRAHLLNKLSKKDIYGDSVPEVVGICTEIFNTF
MHTEYGGPGTLLVVPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNEWTGDDGT