CuGenDBv2

Gene ID	MS015117
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	EF-hand domain-containing protein
Genome location	scaffold2:1251387..1254385
RNA-Seq Expression	MS015117
Synteny	MS015117
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component) GO:0005509 - calcium ion binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6601391.1 hypothetical protein SDJN03_06624, partial [Cucurbita argyrosperma subsp. sororia]

2.2e-95

82.49

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Query:  MCRNFSLFPFLLLLFSSSASLDARMQNTDGVGGNEKIEVGFGRRALLSFKETPRGSNVTFECSRSGPCVACLYSEKNDEKYRCSETGYRIPLKCVEIKDT
        MC N  L P LLLLFS  ASLDA++QNTD V GNE+IE+GFGRRALLSFKETP+GSNV+FECSRSGPC+ACLYSEKNDEKYRCSETGYRIPLKCVEIKDT
Subjt:  MCRNFSLFPFLLLLFSSSASLDARMQNTDGVGGNEKIEVGFGRRALLSFKETPRGSNVTFECSRSGPCVACLYSEKNDEKYRCSETGYRIPLKCVEIKDT

Query:  STVSKEKKSHNGRSMHEMSYEHKLVIPVPNDASDHASSTVHRNLRDASLSVTDGSQAYITYRSCIPSDNEEKLSVLGFEGIVLCLLLVSGSVVYFRRKRT
        S VS EKKSH+GRSM EMSYEHKLVIPV NDA  HAS   HRNLRD S+S TDG+QAY TYRSCIPS NEEKLSVLGFEGIVLCLLLVSGS +Y RRKRT
Subjt:  STVSKEKKSHNGRSMHEMSYEHKLVIPVPNDASDHASSTVHRNLRDASLSVTDGSQAYITYRSCIPSDNEEKLSVLGFEGIVLCLLLVSGSVVYFRRKRT

Query:  VSTAGFAAGRVQSNPRF
        VSTAGFA+GR+QSN RF
Subjt:  VSTAGFAAGRVQSNPRF

KAG7032169.1 hypothetical protein SDJN02_06212, partial [Cucurbita argyrosperma subsp. argyrosperma]

4.5e-96

82.95

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Query:  MCRNFSLFPFLLLLFSSSASLDARMQNTDGVGGNEKIEVGFGRRALLSFKETPRGSNVTFECSRSGPCVACLYSEKNDEKYRCSETGYRIPLKCVEIKDT
        MC N  L P LLLLFS SASLDA++QNTD V GNE+IE+GFGRRALLSFKETP+GSNV+FECSRSGPC+ACLYSEKNDEKYRCSETGYRIPLKCVEIKDT
Subjt:  MCRNFSLFPFLLLLFSSSASLDARMQNTDGVGGNEKIEVGFGRRALLSFKETPRGSNVTFECSRSGPCVACLYSEKNDEKYRCSETGYRIPLKCVEIKDT

Query:  STVSKEKKSHNGRSMHEMSYEHKLVIPVPNDASDHASSTVHRNLRDASLSVTDGSQAYITYRSCIPSDNEEKLSVLGFEGIVLCLLLVSGSVVYFRRKRT
        S VS EKKSH+GRSM EMSYEHKLVIPV NDA  HAS   HRNLRD S+S TDG+QAY TYRSCIPS NEEKLSVLGFEGIVLCLLLVSGS +Y RRKRT
Subjt:  STVSKEKKSHNGRSMHEMSYEHKLVIPVPNDASDHASSTVHRNLRDASLSVTDGSQAYITYRSCIPSDNEEKLSVLGFEGIVLCLLLVSGSVVYFRRKRT

Query:  VSTAGFAAGRVQSNPRF
        VSTAGFA+GR+QSN RF
Subjt:  VSTAGFAAGRVQSNPRF

XP_022151125.1 uncharacterized protein LOC111019130 [Momordica charantia]

5.4e-118

99.54

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Query:  MCRNFSLFPFLLLLFSSSASLDARMQNTDGVGGNEKIEVGFGRRALLSFKETPRGSNVTFECSRSGPCVACLYSEKNDEKYRCSETGYRIPLKCVEIKDT
        MCRNFSLFPFLLLLFSSSASLDARMQNTDGVGGNEKIEVGFGRRALLSFKETPRGSNVTFECSRSGPCVACLYSEKNDEKYRCSETGYRIPLKCVEIKDT
Subjt:  MCRNFSLFPFLLLLFSSSASLDARMQNTDGVGGNEKIEVGFGRRALLSFKETPRGSNVTFECSRSGPCVACLYSEKNDEKYRCSETGYRIPLKCVEIKDT

Query:  STVSKEKKSHNGRSMHEMSYEHKLVIPVPNDASDHASSTVHRNLRDASLSVTDGSQAYITYRSCIPSDNEEKLSVLGFEGIVLCLLLVSGSVVYFRRKRT
        STVSKEKKSHNGRSMHEMSYEHKLVIPVPNDASDHASSTVHRNLRDASLSVTDGSQAYITYRSCIPSDNEEKLSVLGFEGIVLCLLLVSG VVYFRRKRT
Subjt:  STVSKEKKSHNGRSMHEMSYEHKLVIPVPNDASDHASSTVHRNLRDASLSVTDGSQAYITYRSCIPSDNEEKLSVLGFEGIVLCLLLVSGSVVYFRRKRT

Query:  VSTAGFAAGRVQSNPRF
        VSTAGFAAGRVQSNPRF
Subjt:  VSTAGFAAGRVQSNPRF

XP_022956920.1 uncharacterized protein LOC111458461 isoform X1 [Cucurbita moschata]

4.9e-95

82.49

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Query:  MCRNFSLFPFLLLLFSSSASLDARMQNTDGVGGNEKIEVGFGRRALLSFKETPRGSNVTFECSRSGPCVACLYSEKNDEKYRCSETGYRIPLKCVEIKDT
        MC N  L P LLLLFS  ASLDA++QNTD V GNE+IE+GFGRRALLSFKETP+GSNV+FECSRSGPC+ACLYSEKNDEKYRCSETGYRIPLKCVEIKDT
Subjt:  MCRNFSLFPFLLLLFSSSASLDARMQNTDGVGGNEKIEVGFGRRALLSFKETPRGSNVTFECSRSGPCVACLYSEKNDEKYRCSETGYRIPLKCVEIKDT

Query:  STVSKEKKSHNGRSMHEMSYEHKLVIPVPNDASDHASSTVHRNLRDASLSVTDGSQAYITYRSCIPSDNEEKLSVLGFEGIVLCLLLVSGSVVYFRRKRT
        S VS EKKSH+GRSM EMSYEHKLVIPV NDAS HAS    RNLRD S+S TDG+QAY TYRSCIPS NEEKLSVLGFEGIVLCLLLVSGS +Y RRKRT
Subjt:  STVSKEKKSHNGRSMHEMSYEHKLVIPVPNDASDHASSTVHRNLRDASLSVTDGSQAYITYRSCIPSDNEEKLSVLGFEGIVLCLLLVSGSVVYFRRKRT

Query:  VSTAGFAAGRVQSNPRF
        VSTAGFA+GR+QSN RF
Subjt:  VSTAGFAAGRVQSNPRF

XP_023513837.1 uncharacterized protein LOC111778321 [Cucurbita pepo subsp. pepo]

1.1e-94

82.49

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Query:  MCRNFSLFPFLLLLFSSSASLDARMQNTDGVGGNEKIEVGFGRRALLSFKETPRGSNVTFECSRSGPCVACLYSEKNDEKYRCSETGYRIPLKCVEIKDT
        MC N  + P LLLLF  SASLDA++QNTD V  NE IE+GFGRRALLSFKETP+GSNVTFECSRSGPC+ACLYSEKNDEKYRCSETGYRIPLKCVEIKDT
Subjt:  MCRNFSLFPFLLLLFSSSASLDARMQNTDGVGGNEKIEVGFGRRALLSFKETPRGSNVTFECSRSGPCVACLYSEKNDEKYRCSETGYRIPLKCVEIKDT

Query:  STVSKEKKSHNGRSMHEMSYEHKLVIPVPNDASDHASSTVHRNLRDASLSVTDGSQAYITYRSCIPSDNEEKLSVLGFEGIVLCLLLVSGSVVYFRRKRT
        S VS EKKSH+GRSM EMSYEHKLVIPV NDAS HAS   HRNLRD S+S TDG+QAY TYRSCIPS NEEKLSVLGFEGIVLCLLLVSGS +Y RRKRT
Subjt:  STVSKEKKSHNGRSMHEMSYEHKLVIPVPNDASDHASSTVHRNLRDASLSVTDGSQAYITYRSCIPSDNEEKLSVLGFEGIVLCLLLVSGSVVYFRRKRT

Query:  VSTAGFAAGRVQSNPRF
        VSTAGFA+GR+QSN RF
Subjt:  VSTAGFAAGRVQSNPRF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KVR8 Uncharacterized protein

1.7e-93

82.03

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Query:  MCRNFSLFPFLLLLFSSSASLDARMQNTDGVGGNEKIEVGFGRRALLSFKETPRGSNVTFECSRSGPCVACLYSEKNDEKYRCSETGYRIPLKCVEIKDT
        M   FS  PFLLLLF+ SASL A+ QNTD VGG+E+IE+GFGRRALLSFKETP+GSNVTFECSRSGPCVACLYSEKNDEKYRCSETGYRIPLKCVEIKDT
Subjt:  MCRNFSLFPFLLLLFSSSASLDARMQNTDGVGGNEKIEVGFGRRALLSFKETPRGSNVTFECSRSGPCVACLYSEKNDEKYRCSETGYRIPLKCVEIKDT

Query:  STVSKEKKSHNGRSMHEMSYEHKLVIPVPNDASDHASSTVHRNLRDASLSVTDGSQAYITYRSCIPSDNEEKLSVLGFEGIVLCLLLVSGSVVYFRRKRT
        S VS  KKSHNGRSM ++SYEHK+   VP+DAS +ASS  HRNLRD S+S TDGSQ+YITYRSCIPS NEEKLSVLGFEGIVLCLLL+SGSVVYFRRKR+
Subjt:  STVSKEKKSHNGRSMHEMSYEHKLVIPVPNDASDHASSTVHRNLRDASLSVTDGSQAYITYRSCIPSDNEEKLSVLGFEGIVLCLLLVSGSVVYFRRKRT

Query:  VSTAGFAAGRVQSNPRF
        VSTAGFA+GRVQSN RF
Subjt:  VSTAGFAAGRVQSNPRF

A0A6J1DAC4 uncharacterized protein LOC111019130

2.6e-118

99.54

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Query:  MCRNFSLFPFLLLLFSSSASLDARMQNTDGVGGNEKIEVGFGRRALLSFKETPRGSNVTFECSRSGPCVACLYSEKNDEKYRCSETGYRIPLKCVEIKDT
        MCRNFSLFPFLLLLFSSSASLDARMQNTDGVGGNEKIEVGFGRRALLSFKETPRGSNVTFECSRSGPCVACLYSEKNDEKYRCSETGYRIPLKCVEIKDT
Subjt:  MCRNFSLFPFLLLLFSSSASLDARMQNTDGVGGNEKIEVGFGRRALLSFKETPRGSNVTFECSRSGPCVACLYSEKNDEKYRCSETGYRIPLKCVEIKDT

Query:  STVSKEKKSHNGRSMHEMSYEHKLVIPVPNDASDHASSTVHRNLRDASLSVTDGSQAYITYRSCIPSDNEEKLSVLGFEGIVLCLLLVSGSVVYFRRKRT
        STVSKEKKSHNGRSMHEMSYEHKLVIPVPNDASDHASSTVHRNLRDASLSVTDGSQAYITYRSCIPSDNEEKLSVLGFEGIVLCLLLVSG VVYFRRKRT
Subjt:  STVSKEKKSHNGRSMHEMSYEHKLVIPVPNDASDHASSTVHRNLRDASLSVTDGSQAYITYRSCIPSDNEEKLSVLGFEGIVLCLLLVSGSVVYFRRKRT

Query:  VSTAGFAAGRVQSNPRF
        VSTAGFAAGRVQSNPRF
Subjt:  VSTAGFAAGRVQSNPRF

A0A6J1GZ36 uncharacterized protein LOC111458461 isoform X1

2.4e-95

82.49

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Query:  MCRNFSLFPFLLLLFSSSASLDARMQNTDGVGGNEKIEVGFGRRALLSFKETPRGSNVTFECSRSGPCVACLYSEKNDEKYRCSETGYRIPLKCVEIKDT
        MC N  L P LLLLFS  ASLDA++QNTD V GNE+IE+GFGRRALLSFKETP+GSNV+FECSRSGPC+ACLYSEKNDEKYRCSETGYRIPLKCVEIKDT
Subjt:  MCRNFSLFPFLLLLFSSSASLDARMQNTDGVGGNEKIEVGFGRRALLSFKETPRGSNVTFECSRSGPCVACLYSEKNDEKYRCSETGYRIPLKCVEIKDT

Query:  STVSKEKKSHNGRSMHEMSYEHKLVIPVPNDASDHASSTVHRNLRDASLSVTDGSQAYITYRSCIPSDNEEKLSVLGFEGIVLCLLLVSGSVVYFRRKRT
        S VS EKKSH+GRSM EMSYEHKLVIPV NDAS HAS    RNLRD S+S TDG+QAY TYRSCIPS NEEKLSVLGFEGIVLCLLLVSGS +Y RRKRT
Subjt:  STVSKEKKSHNGRSMHEMSYEHKLVIPVPNDASDHASSTVHRNLRDASLSVTDGSQAYITYRSCIPSDNEEKLSVLGFEGIVLCLLLVSGSVVYFRRKRT

Query:  VSTAGFAAGRVQSNPRF
        VSTAGFA+GR+QSN RF
Subjt:  VSTAGFAAGRVQSNPRF

A0A6J1JTF7 uncharacterized protein LOC111488176 isoform X1

5.3e-95

82.49

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Query:  MCRNFSLFPFLLLLFSSSASLDARMQNTDGVGGNEKIEVGFGRRALLSFKETPRGSNVTFECSRSGPCVACLYSEKNDEKYRCSETGYRIPLKCVEIKDT
        MC N  L P LLLLFS SASLDA++QNT  VGGNE+IE+GFGRRALLSFKETP+GSNVTFECSRSGPC+ACLYSEKNDEKYRCSETGYRIPLKCVEIKDT
Subjt:  MCRNFSLFPFLLLLFSSSASLDARMQNTDGVGGNEKIEVGFGRRALLSFKETPRGSNVTFECSRSGPCVACLYSEKNDEKYRCSETGYRIPLKCVEIKDT

Query:  STVSKEKKSHNGRSMHEMSYEHKLVIPVPNDASDHASSTVHRNLRDASLSVTDGSQAYITYRSCIPSDNEEKLSVLGFEGIVLCLLLVSGSVVYFRRKRT
        S VS E+KSH+GRS+ EMSYEHKLVIPV NDA  HAS   HR LRD S+S TDG+QAY TYRSCIPS NEEKLSVLGFEGIVLCLLLVSGS VY RRKRT
Subjt:  STVSKEKKSHNGRSMHEMSYEHKLVIPVPNDASDHASSTVHRNLRDASLSVTDGSQAYITYRSCIPSDNEEKLSVLGFEGIVLCLLLVSGSVVYFRRKRT

Query:  VSTAGFAAGRVQSNPRF
        VSTAGFA+GR+QSN RF
Subjt:  VSTAGFAAGRVQSNPRF

A0A6J1JVD0 uncharacterized protein LOC111488176 isoform X2

7.7e-94

82.49

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Query:  MCRNFSLFPFLLLLFSSSASLDARMQNTDGVGGNEKIEVGFGRRALLSFKETPRGSNVTFECSRSGPCVACLYSEKNDEKYRCSETGYRIPLKCVEIKDT
        MC N  L P LLLLFS SASLDA++QNT  VGGNE+IE+GFGRRALLSFKETP+GSNVTFECSRSGPC+ACLYSEKNDEKYRCSETGYRIPLKCVEIKDT
Subjt:  MCRNFSLFPFLLLLFSSSASLDARMQNTDGVGGNEKIEVGFGRRALLSFKETPRGSNVTFECSRSGPCVACLYSEKNDEKYRCSETGYRIPLKCVEIKDT

Query:  STVSKEKKSHNGRSMHEMSYEHKLVIPVPNDASDHASSTVHRNLRDASLSVTDGSQAYITYRSCIPSDNEEKLSVLGFEGIVLCLLLVSGSVVYFRRKRT
        S VS E+KSH+GRS+ EMSYEHKLVIPV NDA  HAS   HR LRD S+S TDG+QAY TYRSCIPS NEEKLSVLGFEGIVLCLLLVSGS VY RRKRT
Subjt:  STVSKEKKSHNGRSMHEMSYEHKLVIPVPNDASDHASSTVHRNLRDASLSVTDGSQAYITYRSCIPSDNEEKLSVLGFEGIVLCLLLVSGSVVYFRRKRT

Query:  VSTAGFAAGRVQSNPRF
        VSTAGFA+GR+QSN RF
Subjt:  VSTAGFAAGRVQSNPRF

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G69980.1 unknown protein

6.7e-42

47.64

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Query:  FLLLLFSSS--ASLDARMQNTDGVGGNEKIEVGFGRRALLSFKETPRGSNVTFECSRSGPCVACLYSEKNDEKYRCSETGYRIPLKCVEIKDTSTVSKEK
        F + +++SS  +S+ AR    D   G+E+I    GRR LL FKETP+GSN+TF CS SGPCV+C  SEK  EKYRCSETGYRIP KC E+++   V   K
Subjt:  FLLLLFSSS--ASLDARMQNTDGVGGNEKIEVGFGRRALLSFKETPRGSNVTFECSRSGPCVACLYSEKNDEKYRCSETGYRIPLKCVEIKDTSTVSKEK

Query:  KSHNGRSMHEMSYEHKLVIPVPNDASDHASSTVHRNLRDASLSVTD-GSQAYITYRSCIPSDNEEKLSVLGFEGIVLCLLLVSGSVVYFRRKRTVSTAGF
        K+    + ++ S          N+  + A +   RNL D S   T   SQ+Y TYRSC+PS +EEKLSVLGFE I+L L L+SG+ +Y R+++TV   G 
Subjt:  KSHNGRSMHEMSYEHKLVIPVPNDASDHASSTVHRNLRDASLSVTD-GSQAYITYRSCIPSDNEEKLSVLGFEGIVLCLLLVSGSVVYFRRKRTVSTAGF

Query:  -AAGRVQSNPRF
         ++GR+Q N RF
Subjt:  -AAGRVQSNPRF

Sequences

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CDS sequence

Show/hide CDS sequence

ATGTGTCGGAATTTTTCGTTGTTTCCTTTTCTTCTTCTTCTCTTCAGCTCGTCTGCTTCACTTGATGCCCGAATGCAGAATACAGACGGAGTCGGTGGGAACGAAAAAAT
TGAGGTAGGGTTTGGGCGCAGAGCTCTATTGAGTTTCAAAGAGACTCCTCGGGGAAGTAACGTTACCTTTGAGTGCTCTCGTTCTGGTCCCTGTGTTGCCTGCCTCTACT
CAGAAAAGAATGATGAAAAATATCGCTGCAGTGAGACTGGTTATCGTATTCCCCTGAAATGTGTGGAAATCAAAGATACTTCGACCGTGTCCAAAGAGAAAAAATCTCAT
AATGGTCGCTCAATGCATGAAATGTCTTATGAGCACAAGCTTGTGATCCCTGTACCGAATGATGCAAGTGATCATGCTTCATCAACTGTACACAGAAATCTACGGGATGC
TTCTCTCTCAGTGACAGATGGTTCTCAGGCTTACATCACTTATAGAAGCTGTATTCCATCAGATAATGAAGAAAAGTTGTCTGTACTTGGTTTTGAGGGCATTGTGCTGT
GCTTGCTGCTCGTTAGTGGTTCGGTTGTATATTTCAGAAGGAAGCGAACTGTTTCAACAGCTGGTTTTGCTGCTGGTAGGGTGCAGTCAAATCCCAGGTTT

mRNA sequence

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Protein sequence

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MCRNFSLFPFLLLLFSSSASLDARMQNTDGVGGNEKIEVGFGRRALLSFKETPRGSNVTFECSRSGPCVACLYSEKNDEKYRCSETGYRIPLKCVEIKDTSTVSKEKKSH
NGRSMHEMSYEHKLVIPVPNDASDHASSTVHRNLRDASLSVTDGSQAYITYRSCIPSDNEEKLSVLGFEGIVLCLLLVSGSVVYFRRKRTVSTAGFAAGRVQSNPRF

MS015117 (gene) of Bitter gourd (TR) v1 genome