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MS015119 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015119
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCLAVATA3/ESR (CLE)-related protein 25-like
Genome locationscaffold2:1260565..1260834
RNA-Seq ExpressionMS015119
SyntenyMS015119
Gene Ontology termsGO:0045168 - cell-cell signaling involved in cell fate commitment (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR039316 - CLAVATA3/ESR (CLE)-related protein 25/26


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7030819.1 hypothetical protein SDJN02_04856, partial [Cucurbita argyrosperma subsp. argyrosperma]7.2e-1653.76Show/hide
Query:  MRSEGNLCLFSYLKFLLQALVVGLFLWILMVGLPESRERPAVETTNRLLAT---VGSHVKQVKVLPNNNHQDLDLNFMSKVRVPKGPDPIHNR
        MR EG+ C FSY K LL A+ VG+F+W+L+VG+P+S ER   +TT+   A     GSH+KQ K          +LNFMSKV+VPKGPDPIHNR
Subjt:  MRSEGNLCLFSYLKFLLQALVVGLFLWILMVGLPESRERPAVETTNRLLAT---VGSHVKQVKVLPNNNHQDLDLNFMSKVRVPKGPDPIHNR

PON53732.1 CLAVATA3/ESR (CLE)-related protein [Trema orientale]3.3e-0544.32Show/hide
Query:  YLKFLLQALVVGLFLWILMVGLPESRERPAVETTNRLLATVGSHVK------QVKVLPNNN--HQDLDL-NFMSKVRVPKGPDPIHNR
        +LK L++A+VV   +WIL+ G PE       +T   L A   S  K      QV V       H  LDL N+MSK RVP GPDPIHNR
Subjt:  YLKFLLQALVVGLFLWILMVGLPESRERPAVETTNRLLATVGSHVK------QVKVLPNNN--HQDLDL-NFMSKVRVPKGPDPIHNR

XP_011655655.1 uncharacterized protein LOC105435565 [Cucumis sativus]1.4e-1147.92Show/hide
Query:  MRSEGNLCLFSYLKFLLQALVVGLFLWILMVGL---PESRER---PAVETTNRLLATVGSHVKQVKVLPNNNHQDLDLNFMSKVRVPKGPDPIHNR
        M+S  + C FSYLK LL A+VVGLF+W+L+VG    P  R +    A E+ +++         + ++  NN+ + LD NFMSKVRVPKGPDPIHNR
Subjt:  MRSEGNLCLFSYLKFLLQALVVGLFLWILMVGL---PESRER---PAVETTNRLLATVGSHVKQVKVLPNNNHQDLDLNFMSKVRVPKGPDPIHNR

XP_022151235.1 uncharacterized protein LOC111019209 [Momordica charantia]7.6e-4298.89Show/hide
Query:  MRSEGNLCLFSYLKFLLQALVVGLFLWILMVGLPESRERPAVETTNRLLATVGSHVKQVKVLPNNNHQDLDLNFMSKVRVPKGPDPIHNR
        MRSEGNLCLFSYLKFLLQALVVGLFLWILMVGLPESRERPAVETTN LLATVGSHVKQVKVLPNNNHQDLDLNFMSKVRVPKGPDPIHNR
Subjt:  MRSEGNLCLFSYLKFLLQALVVGLFLWILMVGLPESRERPAVETTNRLLATVGSHVKQVKVLPNNNHQDLDLNFMSKVRVPKGPDPIHNR

XP_038891924.1 uncharacterized protein LOC120081268 [Benincasa hispida]2.5e-1660Show/hide
Query:  MRSEGNLCLFSYLKFLLQALVVGLFLWILMVG-LPESR---ERPAVETTNRLLATVGSHV-KQVKVLPNNNHQDLDLNFMSKVRVPKGPDPIHNR
        MRS  +   FSYLK LL A+VVGLF+W+L+VG LP  R    RPA E+        GSHV KQ + L NNNH  LD NFMSKV+VPKGPDPIHNR
Subjt:  MRSEGNLCLFSYLKFLLQALVVGLFLWILMVG-LPESR---ERPAVETTNRLLATVGSHV-KQVKVLPNNNHQDLDLNFMSKVRVPKGPDPIHNR

TrEMBL top hitse value%identityAlignment
A0A0A0KQF7 Uncharacterized protein6.8e-1247.92Show/hide
Query:  MRSEGNLCLFSYLKFLLQALVVGLFLWILMVGL---PESRER---PAVETTNRLLATVGSHVKQVKVLPNNNHQDLDLNFMSKVRVPKGPDPIHNR
        M+S  + C FSYLK LL A+VVGLF+W+L+VG    P  R +    A E+ +++         + ++  NN+ + LD NFMSKVRVPKGPDPIHNR
Subjt:  MRSEGNLCLFSYLKFLLQALVVGLFLWILMVGL---PESRER---PAVETTNRLLATVGSHVKQVKVLPNNNHQDLDLNFMSKVRVPKGPDPIHNR

A0A1U8A389 CLAVATA3/ESR (CLE)-related protein 25-like1.6e-0541.98Show/hide
Query:  KFLLQALVVGLFLWILMVGLPESRERPAVETTNRLLATVGSHVKQVKVLPNNN----HQDLDLNFMSKVRVPKGPDPIHNR
        +FL +A +   FL IL+V +  SR    + TT ++     +  KQ +V+   +    H DLD N+MSK RVP GPDPIHNR
Subjt:  KFLLQALVVGLFLWILMVGLPESRERPAVETTNRLLATVGSHVKQVKVLPNNN----HQDLDLNFMSKVRVPKGPDPIHNR

A0A2P5BY63 CLAVATA3/ESR (CLE)-related protein1.6e-0544.32Show/hide
Query:  YLKFLLQALVVGLFLWILMVGLPESRERPAVETTNRLLATVGSHVK------QVKVLPNNN--HQDLDL-NFMSKVRVPKGPDPIHNR
        +LK L++A+VV   +WIL+ G PE       +T   L A   S  K      QV V       H  LDL N+MSK RVP GPDPIHNR
Subjt:  YLKFLLQALVVGLFLWILMVGLPESRERPAVETTNRLLATVGSHVK------QVKVLPNNN--HQDLDL-NFMSKVRVPKGPDPIHNR

A0A6J1B218 CLAVATA3/ESR (CLE)-related protein 252.1e-0542.55Show/hide
Query:  SEGNLCLFSYLKFLLQALVVGLFLWILMVGLPESRERPAVET-TNRLLATVGSHVKQVKVLP-----NNNHQDLDLNFMSKVRVPKGPDPIHNR
        S  +  LFS  K L   LVV  F+ +L+VG  +S       T T    ++ G   + VKVL      ++ H  LDLN+MSK RVP GPDPIHNR
Subjt:  SEGNLCLFSYLKFLLQALVVGLFLWILMVGLPESRERPAVET-TNRLLATVGSHVKQVKVLP-----NNNHQDLDLNFMSKVRVPKGPDPIHNR

A0A6J1DAM7 uncharacterized protein LOC1110192093.7e-4298.89Show/hide
Query:  MRSEGNLCLFSYLKFLLQALVVGLFLWILMVGLPESRERPAVETTNRLLATVGSHVKQVKVLPNNNHQDLDLNFMSKVRVPKGPDPIHNR
        MRSEGNLCLFSYLKFLLQALVVGLFLWILMVGLPESRERPAVETTN LLATVGSHVKQVKVLPNNNHQDLDLNFMSKVRVPKGPDPIHNR
Subjt:  MRSEGNLCLFSYLKFLLQALVVGLFLWILMVGLPESRERPAVETTNRLLATVGSHVKQVKVLPNNNHQDLDLNFMSKVRVPKGPDPIHNR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAAGTGAAGGTAATTTGTGCTTGTTTTCTTACTTGAAGTTCTTGCTTCAAGCTTTGGTTGTGGGGCTTTTCTTATGGATTTTAATGGTGGGCTTGCCGGAGAGTCG
AGAACGGCCGGCCGTGGAAACAACCAACAGGCTATTGGCAACCGTGGGAAGCCATGTGAAGCAAGTGAAGGTACTGCCCAACAACAACCATCAAGATTTGGATCTCAACT
TCATGAGCAAAGTGAGAGTTCCTAAAGGGCCCGACCCTATTCATAACAGG
mRNA sequenceShow/hide mRNA sequence
ATGAGAAGTGAAGGTAATTTGTGCTTGTTTTCTTACTTGAAGTTCTTGCTTCAAGCTTTGGTTGTGGGGCTTTTCTTATGGATTTTAATGGTGGGCTTGCCGGAGAGTCG
AGAACGGCCGGCCGTGGAAACAACCAACAGGCTATTGGCAACCGTGGGAAGCCATGTGAAGCAAGTGAAGGTACTGCCCAACAACAACCATCAAGATTTGGATCTCAACT
TCATGAGCAAAGTGAGAGTTCCTAAAGGGCCCGACCCTATTCATAACAGG
Protein sequenceShow/hide protein sequence
MRSEGNLCLFSYLKFLLQALVVGLFLWILMVGLPESRERPAVETTNRLLATVGSHVKQVKVLPNNNHQDLDLNFMSKVRVPKGPDPIHNR