; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS015157 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015157
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionbinding partner of ACD11 1
Genome locationscaffold2:1525818..1528376
RNA-Seq ExpressionMS015157
SyntenyMS015157
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR034360 - Vip1-like, RNA recognition motif, plant
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013155.1 Binding partner of ACD11 1 [Cucurbita argyrosperma subsp. argyrosperma]1.0e-11288.93Show/hide
Query:  MNPGGYTVEVTGLSPKATEKDVFDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVYITRWGHFDDEFGFWSRPSGHHEEDSR
        MNPGGYTVEVTGLSPKATEKD+ DFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRV ITRWGHFD+EF FWSRPSG+HEED  
Subjt:  MNPGGYTVEVTGLSPKATEKDVFDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVYITRWGHFDDEFGFWSRPSGHHEEDSR

Query:  STSPQRSQFAASAGSAVTMAQEVVKTMLAMGYVLGKDALIKAKAFDESHQVSATAAAKVADLSQRIGLTDMIGAGFEAVKTMDEKYHVSQTTKSAISATG
          S QRSQF ++AG+AV+MAQ+VVKTMLAMGYVLGKD   KAKAFDESHQVSATAAAKVADLS RIGLTDMIGAG+EA KTMDEKYHV QTTKSAISATG
Subjt:  STSPQRSQFAASAGSAVTMAQEVVKTMLAMGYVLGKDALIKAKAFDESHQVSATAAAKVADLSQRIGLTDMIGAGFEAVKTMDEKYHVSQTTKSAISATG

Query:  RTAAAAADTVVRSSYFSRAALLMSDALNRAAKVAADLGSRGLEH
        RTAAAAADTVVRSSYFSR AL MSDALNRAAK AADLGSRGLEH
Subjt:  RTAAAAADTVVRSSYFSRAALLMSDALNRAAKVAADLGSRGLEH

XP_008446330.1 PREDICTED: binding partner of ACD11 1 [Cucumis melo]1.7e-11289.34Show/hide
Query:  MNPGGYTVEVTGLSPKATEKDVFDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVYITRWGHFDDEFGFWSRPSGHHEEDSR
        MNPGGYTVEVTGLSP ATEKDV DFFAFSGAIELVEIVRSG+DACTAYV+FKDAYSQETACLLSGA IVDQRV ITRWGHFDDEFGFWSRP GH EEDS 
Subjt:  MNPGGYTVEVTGLSPKATEKDVFDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVYITRWGHFDDEFGFWSRPSGHHEEDSR

Query:  STSPQRSQFAASAGSAVTMAQEVVKTMLAMGYVLGKDALIKAKAFDESHQVSATAAAKVADLSQRIGLTDMIGAGFEAVKTMDEKYHVSQTTKSAISATG
        S S QRSQF +SAG+AVTMAQEVVKTMLAMGYVLGKD   KAKAFDESHQVSATAAAKVADLS RIGLTDM+GAGFEAVK++DEKYHV +TTKSAISATG
Subjt:  STSPQRSQFAASAGSAVTMAQEVVKTMLAMGYVLGKDALIKAKAFDESHQVSATAAAKVADLSQRIGLTDMIGAGFEAVKTMDEKYHVSQTTKSAISATG

Query:  RTAAAAADTVVRSSYFSRAALLMSDALNRAAKVAADLGSRGLEH
        RTAAAAADTVVRSSYFSR AL MSDALNRAAK AADLGSRGLEH
Subjt:  RTAAAAADTVVRSSYFSRAALLMSDALNRAAKVAADLGSRGLEH

XP_022151229.1 binding partner of ACD11 1 [Momordica charantia]2.7e-12699.18Show/hide
Query:  MNPGGYTVEVTGLSPKATEKDVFDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVYITRWGHFDDEFGFWSRPSGHHEEDSR
        MNPGGYTVEVTGLSPKATEK+VFDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVYITRWGHFDDEFGFWSRPSGHHEEDSR
Subjt:  MNPGGYTVEVTGLSPKATEKDVFDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVYITRWGHFDDEFGFWSRPSGHHEEDSR

Query:  STSPQRSQFAASAGSAVTMAQEVVKTMLAMGYVLGKDALIKAKAFDESHQVSATAAAKVADLSQRIGLTDMIGAGFEAVKTMDEKYHVSQTTKSAISATG
        STSPQRSQFA+SAGSAVTMAQEVVKTMLAMGYVLGKDALIKAKAFDESHQVSATAAAKVADLSQRIGLTDMIGAGFEAVKTMDEKYHVSQTTKSAISATG
Subjt:  STSPQRSQFAASAGSAVTMAQEVVKTMLAMGYVLGKDALIKAKAFDESHQVSATAAAKVADLSQRIGLTDMIGAGFEAVKTMDEKYHVSQTTKSAISATG

Query:  RTAAAAADTVVRSSYFSRAALLMSDALNRAAKVAADLGSRGLEH
        RTAAAAADTVVRSSYFSRAALLMSDALNRAAKVAADLGSRGLEH
Subjt:  RTAAAAADTVVRSSYFSRAALLMSDALNRAAKVAADLGSRGLEH

XP_022945905.1 binding partner of ACD11 1-like [Cucurbita moschata]1.0e-11288.93Show/hide
Query:  MNPGGYTVEVTGLSPKATEKDVFDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVYITRWGHFDDEFGFWSRPSGHHEEDSR
        MNPGGYTVEVTGLSPKATEKD+ DFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRV ITRWGHFD+EF FWSRPSG+HEED  
Subjt:  MNPGGYTVEVTGLSPKATEKDVFDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVYITRWGHFDDEFGFWSRPSGHHEEDSR

Query:  STSPQRSQFAASAGSAVTMAQEVVKTMLAMGYVLGKDALIKAKAFDESHQVSATAAAKVADLSQRIGLTDMIGAGFEAVKTMDEKYHVSQTTKSAISATG
          S QRSQF ++AG+AV+MAQ+VVKTMLAMGYVLGKD   KAKAFDESHQVSATAAAKVADLS RIGLTDMIGAG+EA KTMDEKYHV QTTKSAISATG
Subjt:  STSPQRSQFAASAGSAVTMAQEVVKTMLAMGYVLGKDALIKAKAFDESHQVSATAAAKVADLSQRIGLTDMIGAGFEAVKTMDEKYHVSQTTKSAISATG

Query:  RTAAAAADTVVRSSYFSRAALLMSDALNRAAKVAADLGSRGLEH
        RTAAAAADTVVRSSYFSR AL MSDALNRAAK AADLGSRGLEH
Subjt:  RTAAAAADTVVRSSYFSRAALLMSDALNRAAKVAADLGSRGLEH

XP_038892042.1 binding partner of ACD11 1 [Benincasa hispida]4.5e-11389.34Show/hide
Query:  MNPGGYTVEVTGLSPKATEKDVFDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVYITRWGHFDDEFGFWSRPSGHHEEDSR
        MNPGGYTVEVTGLSPKATEKDV DFFAFSGAI+LVEI+RSG+DACTAYV+FKDAYSQETACLLSGA I+DQRV ITRWG+FDDEFGFWSR SGHHEEDS 
Subjt:  MNPGGYTVEVTGLSPKATEKDVFDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVYITRWGHFDDEFGFWSRPSGHHEEDSR

Query:  STSPQRSQFAASAGSAVTMAQEVVKTMLAMGYVLGKDALIKAKAFDESHQVSATAAAKVADLSQRIGLTDMIGAGFEAVKTMDEKYHVSQTTKSAISATG
          S QRSQF +SAG+AVTMAQEVVKTMLAMGYVLGKD L KAKA DESHQVS TAAAKVADLS RIGLTDMIGAGFEAVKTMDEKYHV QTTKSAISATG
Subjt:  STSPQRSQFAASAGSAVTMAQEVVKTMLAMGYVLGKDALIKAKAFDESHQVSATAAAKVADLSQRIGLTDMIGAGFEAVKTMDEKYHVSQTTKSAISATG

Query:  RTAAAAADTVVRSSYFSRAALLMSDALNRAAKVAADLGSRGLEH
        +TAAAAADTVVRSSYFSR AL MSDALNRAAKVAADLGSRGLEH
Subjt:  RTAAAAADTVVRSSYFSRAALLMSDALNRAAKVAADLGSRGLEH

TrEMBL top hitse value%identityAlignment
A0A0A0KSM6 RRM domain-containing protein8.3e-11389.34Show/hide
Query:  MNPGGYTVEVTGLSPKATEKDVFDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVYITRWGHFDDEFGFWSRPSGHHEEDSR
        MNPGGYTVEVTGLSP ATEKDV DFFAFSGAIELVEIVRSGEDACTAYV+FKDAYSQETACLLSGA IVDQRV ITRWGHFDDEFGFWSRP GH EEDS 
Subjt:  MNPGGYTVEVTGLSPKATEKDVFDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVYITRWGHFDDEFGFWSRPSGHHEEDSR

Query:  STSPQRSQFAASAGSAVTMAQEVVKTMLAMGYVLGKDALIKAKAFDESHQVSATAAAKVADLSQRIGLTDMIGAGFEAVKTMDEKYHVSQTTKSAISATG
          S QRSQF +SAG+AVTMAQEVVKTMLAMGYVLGKD L KAKAFDESHQVSATAAAKVADLS RIGLTDM+GAG+EAVK++DEKYHV +TTKSAISATG
Subjt:  STSPQRSQFAASAGSAVTMAQEVVKTMLAMGYVLGKDALIKAKAFDESHQVSATAAAKVADLSQRIGLTDMIGAGFEAVKTMDEKYHVSQTTKSAISATG

Query:  RTAAAAADTVVRSSYFSRAALLMSDALNRAAKVAADLGSRGLEH
        RTAAAAADTVVRSSYFSR AL MSDALNRAAK AADLGSRGLEH
Subjt:  RTAAAAADTVVRSSYFSRAALLMSDALNRAAKVAADLGSRGLEH

A0A1S3BET5 binding partner of ACD11 18.3e-11389.34Show/hide
Query:  MNPGGYTVEVTGLSPKATEKDVFDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVYITRWGHFDDEFGFWSRPSGHHEEDSR
        MNPGGYTVEVTGLSP ATEKDV DFFAFSGAIELVEIVRSG+DACTAYV+FKDAYSQETACLLSGA IVDQRV ITRWGHFDDEFGFWSRP GH EEDS 
Subjt:  MNPGGYTVEVTGLSPKATEKDVFDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVYITRWGHFDDEFGFWSRPSGHHEEDSR

Query:  STSPQRSQFAASAGSAVTMAQEVVKTMLAMGYVLGKDALIKAKAFDESHQVSATAAAKVADLSQRIGLTDMIGAGFEAVKTMDEKYHVSQTTKSAISATG
        S S QRSQF +SAG+AVTMAQEVVKTMLAMGYVLGKD   KAKAFDESHQVSATAAAKVADLS RIGLTDM+GAGFEAVK++DEKYHV +TTKSAISATG
Subjt:  STSPQRSQFAASAGSAVTMAQEVVKTMLAMGYVLGKDALIKAKAFDESHQVSATAAAKVADLSQRIGLTDMIGAGFEAVKTMDEKYHVSQTTKSAISATG

Query:  RTAAAAADTVVRSSYFSRAALLMSDALNRAAKVAADLGSRGLEH
        RTAAAAADTVVRSSYFSR AL MSDALNRAAK AADLGSRGLEH
Subjt:  RTAAAAADTVVRSSYFSRAALLMSDALNRAAKVAADLGSRGLEH

A0A5D3CVI0 Binding partner of ACD11 18.3e-11389.34Show/hide
Query:  MNPGGYTVEVTGLSPKATEKDVFDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVYITRWGHFDDEFGFWSRPSGHHEEDSR
        MNPGGYTVEVTGLSP ATEKDV DFFAFSGAIELVEIVRSG+DACTAYV+FKDAYSQETACLLSGA IVDQRV ITRWGHFDDEFGFWSRP GH EEDS 
Subjt:  MNPGGYTVEVTGLSPKATEKDVFDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVYITRWGHFDDEFGFWSRPSGHHEEDSR

Query:  STSPQRSQFAASAGSAVTMAQEVVKTMLAMGYVLGKDALIKAKAFDESHQVSATAAAKVADLSQRIGLTDMIGAGFEAVKTMDEKYHVSQTTKSAISATG
        S S QRSQF +SAG+AVTMAQEVVKTMLAMGYVLGKD   KAKAFDESHQVSATAAAKVADLS RIGLTDM+GAGFEAVK++DEKYHV +TTKSAISATG
Subjt:  STSPQRSQFAASAGSAVTMAQEVVKTMLAMGYVLGKDALIKAKAFDESHQVSATAAAKVADLSQRIGLTDMIGAGFEAVKTMDEKYHVSQTTKSAISATG

Query:  RTAAAAADTVVRSSYFSRAALLMSDALNRAAKVAADLGSRGLEH
        RTAAAAADTVVRSSYFSR AL MSDALNRAAK AADLGSRGLEH
Subjt:  RTAAAAADTVVRSSYFSRAALLMSDALNRAAKVAADLGSRGLEH

A0A6J1DCD7 binding partner of ACD11 11.3e-12699.18Show/hide
Query:  MNPGGYTVEVTGLSPKATEKDVFDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVYITRWGHFDDEFGFWSRPSGHHEEDSR
        MNPGGYTVEVTGLSPKATEK+VFDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVYITRWGHFDDEFGFWSRPSGHHEEDSR
Subjt:  MNPGGYTVEVTGLSPKATEKDVFDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVYITRWGHFDDEFGFWSRPSGHHEEDSR

Query:  STSPQRSQFAASAGSAVTMAQEVVKTMLAMGYVLGKDALIKAKAFDESHQVSATAAAKVADLSQRIGLTDMIGAGFEAVKTMDEKYHVSQTTKSAISATG
        STSPQRSQFA+SAGSAVTMAQEVVKTMLAMGYVLGKDALIKAKAFDESHQVSATAAAKVADLSQRIGLTDMIGAGFEAVKTMDEKYHVSQTTKSAISATG
Subjt:  STSPQRSQFAASAGSAVTMAQEVVKTMLAMGYVLGKDALIKAKAFDESHQVSATAAAKVADLSQRIGLTDMIGAGFEAVKTMDEKYHVSQTTKSAISATG

Query:  RTAAAAADTVVRSSYFSRAALLMSDALNRAAKVAADLGSRGLEH
        RTAAAAADTVVRSSYFSRAALLMSDALNRAAKVAADLGSRGLEH
Subjt:  RTAAAAADTVVRSSYFSRAALLMSDALNRAAKVAADLGSRGLEH

A0A6J1G2B1 binding partner of ACD11 1-like4.9e-11388.93Show/hide
Query:  MNPGGYTVEVTGLSPKATEKDVFDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVYITRWGHFDDEFGFWSRPSGHHEEDSR
        MNPGGYTVEVTGLSPKATEKD+ DFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRV ITRWGHFD+EF FWSRPSG+HEED  
Subjt:  MNPGGYTVEVTGLSPKATEKDVFDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVYITRWGHFDDEFGFWSRPSGHHEEDSR

Query:  STSPQRSQFAASAGSAVTMAQEVVKTMLAMGYVLGKDALIKAKAFDESHQVSATAAAKVADLSQRIGLTDMIGAGFEAVKTMDEKYHVSQTTKSAISATG
          S QRSQF ++AG+AV+MAQ+VVKTMLAMGYVLGKD   KAKAFDESHQVSATAAAKVADLS RIGLTDMIGAG+EA KTMDEKYHV QTTKSAISATG
Subjt:  STSPQRSQFAASAGSAVTMAQEVVKTMLAMGYVLGKDALIKAKAFDESHQVSATAAAKVADLSQRIGLTDMIGAGFEAVKTMDEKYHVSQTTKSAISATG

Query:  RTAAAAADTVVRSSYFSRAALLMSDALNRAAKVAADLGSRGLEH
        RTAAAAADTVVRSSYFSR AL MSDALNRAAK AADLGSRGLEH
Subjt:  RTAAAAADTVVRSSYFSRAALLMSDALNRAAKVAADLGSRGLEH

SwissProt top hitse value%identityAlignment
P87216 Protein vip11.1e-0523.85Show/hide
Query:  VEVTGLSPKATEKDVFDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVYITRWGHFDDEFGFWSRPSGHHEEDSRSTSPQRS
        V VT +SP+ TEK + DFF+F G +  +   +SGE   TA + F+   + +TA LL  A +   ++ IT                   +  + ST+ Q  
Subjt:  VEVTGLSPKATEKDVFDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVYITRWGHFDDEFGFWSRPSGHHEEDSRSTSPQRS

Query:  QFAASAGSAVTMAQE------VVKTMLAMGYVLGKDALIKAKAFDESHQVSATAAAKVADLSQRIGLTDMIGAGFEAVKTMDEKYHVSQTTKSAISATGR
             AG      QE      ++  +L+ GY L    L K+   D+S+ VS+                 ++ +    V++++E+YHV++      +    
Subjt:  QFAASAGSAVTMAQE------VVKTMLAMGYVLGKDALIKAKAFDESHQVSATAAAKVADLSQRIGLTDMIGAGFEAVKTMDEKYHVSQTTKSAISATGR

Query:  TAAAAADTVVRSSYFSRA
        +      + + S+YF +A
Subjt:  TAAAAADTVVRSSYFSRA

Q9LFD5 Binding partner of ACD11 15.3e-3239Show/hide
Query:  TVEVTGLSPKATEKDVFDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVYITRWGHFDDEFGFWSRPSGHHEEDSRSTSPQR
        +V+V  LS  ATE D+ +FF+FSG +E ++I +S E   +AYV+FK+    ETA LLSGA+I DQ V I    ++       S P+  H E   S     
Subjt:  TVEVTGLSPKATEKDVFDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVYITRWGHFDDEFGFWSRPSGHHEEDSRSTSPQR

Query:  SQFAASAGSAVTMAQEVVKTMLAMGYVLGKDALIKAKAFDESHQVSATAAAKVADLSQRIGLTDMIGAGF----EAVKTMDEKYHVSQTTKSAISATGRT
              A S V  A++VV +MLA G++LGKDA+ KAKAFDE H  ++TA A VA L Q+IGL+  + AG     E +K +D+ + V++ TKS  +A  +T
Subjt:  SQFAASAGSAVTMAQEVVKTMLAMGYVLGKDALIKAKAFDESHQVSATAAAKVADLSQRIGLTDMIGAGF----EAVKTMDEKYHVSQTTKSAISATGRT

Query:  AAAAADTVVRSSYFSRAALLMSDALNRAAKVAADLGSRGLE
         ++A   V+++ Y        + A NR A+ A ++G +  E
Subjt:  AAAAADTVVRSSYFSRAALLMSDALNRAAKVAADLGSRGLE

Arabidopsis top hitse value%identityAlignment
AT1G14340.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.2e-7666.39Show/hide
Query:  GYTVEVTGLSPKATEKDVFDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVYITRWGHFDDEFGFWSRPSGHHEEDSRSTS-
        GY VEVTGLSP  T  D+ DFF+FSG I+ ++IVRSGE ACTAYV FKD+YSQETA LL+GATI+DQRV ITRWG   +EF FW+  S   E++S S   
Subjt:  GYTVEVTGLSPKATEKDVFDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVYITRWGHFDDEFGFWSRPSGHHEEDSRSTS-

Query:  PQRSQFAASAGSAVTMAQEVVKTMLAMGYVLGKDALIKAKAFDESHQVSATAAAKVADLSQRIGLTDMIGAGFEAVKTMDEKYHVSQTTKSAISATGRTA
         QRS+F  +AG AVT AQEVVK MLA G+VLGKDAL KAKAFDESH VSA A A+V+ L QRIGLTD I  G EAV+  D++YHVS T KSA+ ATGRTA
Subjt:  PQRSQFAASAGSAVTMAQEVVKTMLAMGYVLGKDALIKAKAFDESHQVSATAAAKVADLSQRIGLTDMIGAGFEAVKTMDEKYHVSQTTKSAISATGRTA

Query:  AAAADTVVRSSYFSRAALLMSDALNRAAKVAADLGSRG
        AAAA +VV SSYFS  AL +S AL RAAK A+DLG+RG
Subjt:  AAAADTVVRSSYFSRAALLMSDALNRAAKVAADLGSRG

AT3G01210.1 RNA-binding (RRM/RBD/RNP motifs) family protein8.6e-5450.4Show/hide
Query:  MNPGGYTVEVTGLSPKATEKDVFDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVYITRWGHFDDEFGFWSRPSGHHEEDSR
        M P GY  +VT LSP+ATEKDV  FF+  G +ELVEI     DA TAYV+F+DAY+ + A LLSGATIVDQ V+I+ +G +  E       +   EED  
Subjt:  MNPGGYTVEVTGLSPKATEKDVFDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVYITRWGHFDDEFGFWSRPSGHHEEDSR

Query:  STSPQRSQFAASAGSAVTMAQEVVKTMLAMGYVLGKDALIKAKAFDESHQVSATAAAKVADLSQRIGLTDMIGAGFEAVKTMDEKYHVSQTTKSAI----
         T  +   FA+S G A+T+AQ+VV+TMLA GYVL KDA+ KAKA DES + S+  A K+A++S  +GLT  I +  E V++ DEKYH S  TKSA+    
Subjt:  STSPQRSQFAASAGSAVTMAQEVVKTMLAMGYVLGKDALIKAKAFDESHQVSATAAAKVADLSQRIGLTDMIGAGFEAVKTMDEKYHVSQTTKSAI----

Query:  -------SATGRTAAAAADTVVRSSYFSRAALLMSDALNRAAKVAADLGSRG
               + TG+ AAAAA +VV S YF+  AL  SDAL RAAK AA +G  G
Subjt:  -------SATGRTAAAAADTVVRSSYFSRAALLMSDALNRAAKVAADLGSRG

AT4G17720.1 RNA-binding (RRM/RBD/RNP motifs) family protein3.6e-3639.67Show/hide
Query:  TVEVTGLSPKATEKDVFDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVYITRWGHFDDEFGFWSRPSGHHEEDSRSTSPQR
        TV+V+ +S  AT++D+ +FF+FSG I  +E     E    AYV+FKD    ETA LLSGATIVD  V ++    +               E   S  P+ 
Subjt:  TVEVTGLSPKATEKDVFDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVYITRWGHFDDEFGFWSRPSGHHEEDSRSTSPQR

Query:  SQFAASAG-SAVTMAQEVVKTMLAMGYVLGKDALIKAKAFDESHQVSATAAAKVADLSQRIGLTDMIGAGF----EAVKTMDEKYHVSQTTKSAISATGR
        S  +  AG S +  A++VV +MLA G++LGKDA+ KAK+ DE HQ+++TA+AKVA   ++IG TD I  G     E V+ +D+KY VS+ TKSAI+A  +
Subjt:  SQFAASAG-SAVTMAQEVVKTMLAMGYVLGKDALIKAKAFDESHQVSATAAAKVADLSQRIGLTDMIGAGF----EAVKTMDEKYHVSQTTKSAISATGR

Query:  TAAAAADTVVRSSYFSRAALLMSDALNRAAKVAADLGSRGLE
        T + A   ++++ Y    A  ++ A N+ AK A ++G +  E
Subjt:  TAAAAADTVVRSSYFSRAALLMSDALNRAAKVAADLGSRGLE

AT5G16840.2 binding partner of acd11 15.8e-3439Show/hide
Query:  TVEVTGLSPKATEKDVFDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVYITRWGHFDDEFGFWSRPSGHHEEDSRSTSPQR
        +V+V  LS  ATE D+ +FF+FSG +E ++I  S E   +AYV+FK+    ETA LLSGA+I DQ V I    ++       S P+  H E   S     
Subjt:  TVEVTGLSPKATEKDVFDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVYITRWGHFDDEFGFWSRPSGHHEEDSRSTSPQR

Query:  SQFAASAGSAVTMAQEVVKTMLAMGYVLGKDALIKAKAFDESHQVSATAAAKVADLSQRIGLTDMIGAGF----EAVKTMDEKYHVSQTTKSAISATGRT
              A S V  A++VV +MLA G++LGKDA+ KAKAFDE H  ++TA A VA L Q+IGL+  + AG     E +K +D+ + V++ TKS  +A  +T
Subjt:  SQFAASAGSAVTMAQEVVKTMLAMGYVLGKDALIKAKAFDESHQVSATAAAKVADLSQRIGLTDMIGAGF----EAVKTMDEKYHVSQTTKSAISATGRT

Query:  AAAAADTVVRSSYFSRAALLMSDALNRAAKVAADLGSRGLE
         ++A   V+++ Y        + A NR A+ A ++G +  E
Subjt:  AAAAADTVVRSSYFSRAALLMSDALNRAAKVAADLGSRGLE

AT5G46870.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.5e-3437.34Show/hide
Query:  TVEVTGLSPKATEKDVFDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVYITRWGHFDDEFGFWSRPSGHHEEDSRSTSPQR
        TV+V+ +S +ATE+D+ +FF+FSG I  +E     + +  AYV+FKD    ETA LL+G+TIVD  V +T    +       +      +E ++S+SP R
Subjt:  TVEVTGLSPKATEKDVFDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVYITRWGHFDDEFGFWSRPSGHHEEDSRSTSPQR

Query:  SQFAASAGSAVTMAQEVVKTMLAMGYVLGKDALIKAKAFDESHQVSATAAAKVADLSQRIGLTDMIGAG----FEAVKTMDEKYHVSQTTKSAISATGRT
                S    A++VV  M++ G+VLGKDA+ KAK+ DE HQ+++TA+A+V    +RIG T+ I  G     E VK +D+K+ V++ TKSAI+A  +T
Subjt:  SQFAASAGSAVTMAQEVVKTMLAMGYVLGKDALIKAKAFDESHQVSATAAAKVADLSQRIGLTDMIGAG----FEAVKTMDEKYHVSQTTKSAISATGRT

Query:  AAAAADTVVRSSYFSRAALLMSDALNRAAKVAADLGSRGLE
         + A   ++++ Y    A  ++ A NR +K A ++G +  E
Subjt:  AAAAADTVVRSSYFSRAALLMSDALNRAAKVAADLGSRGLE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCCTGGTGGTTATACTGTGGAAGTGACCGGCTTATCTCCTAAAGCAACGGAGAAGGATGTCTTCGATTTCTTCGCTTTCTCTGGCGCAATCGAGCTTGTTGAGAT
CGTTAGATCTGGTGAAGATGCCTGCACTGCATATGTGTCCTTCAAAGATGCTTATTCTCAAGAGACTGCTTGCTTGCTGAGTGGTGCTACAATTGTAGATCAACGAGTGT
ACATCACACGGTGGGGACATTTTGATGATGAGTTTGGTTTTTGGAGTAGGCCTTCCGGTCACCATGAAGAAGACAGTAGGAGTACTTCGCCACAAAGAAGTCAGTTTGCT
GCCAGCGCTGGGAGTGCAGTGACCATGGCCCAGGAAGTAGTCAAAACCATGCTGGCCATGGGCTACGTGCTGGGCAAAGATGCCTTAATCAAAGCCAAAGCCTTCGATGA
ATCTCATCAGGTCTCAGCGACCGCAGCAGCTAAGGTAGCTGATTTGAGTCAGAGAATTGGGCTTACTGACATGATTGGTGCGGGTTTTGAAGCTGTCAAAACCATGGATG
AGAAGTACCATGTATCTCAGACAACCAAATCAGCTATATCAGCCACCGGAAGAACAGCTGCTGCCGCAGCCGATACCGTGGTCAGGAGTAGCTACTTTTCCAGGGCAGCT
CTTCTCATGTCTGATGCCCTGAATCGAGCGGCCAAAGTTGCAGCTGACTTGGGTAGTCGTGGTCTTGAACAT
mRNA sequenceShow/hide mRNA sequence
ATGAATCCTGGTGGTTATACTGTGGAAGTGACCGGCTTATCTCCTAAAGCAACGGAGAAGGATGTCTTCGATTTCTTCGCTTTCTCTGGCGCAATCGAGCTTGTTGAGAT
CGTTAGATCTGGTGAAGATGCCTGCACTGCATATGTGTCCTTCAAAGATGCTTATTCTCAAGAGACTGCTTGCTTGCTGAGTGGTGCTACAATTGTAGATCAACGAGTGT
ACATCACACGGTGGGGACATTTTGATGATGAGTTTGGTTTTTGGAGTAGGCCTTCCGGTCACCATGAAGAAGACAGTAGGAGTACTTCGCCACAAAGAAGTCAGTTTGCT
GCCAGCGCTGGGAGTGCAGTGACCATGGCCCAGGAAGTAGTCAAAACCATGCTGGCCATGGGCTACGTGCTGGGCAAAGATGCCTTAATCAAAGCCAAAGCCTTCGATGA
ATCTCATCAGGTCTCAGCGACCGCAGCAGCTAAGGTAGCTGATTTGAGTCAGAGAATTGGGCTTACTGACATGATTGGTGCGGGTTTTGAAGCTGTCAAAACCATGGATG
AGAAGTACCATGTATCTCAGACAACCAAATCAGCTATATCAGCCACCGGAAGAACAGCTGCTGCCGCAGCCGATACCGTGGTCAGGAGTAGCTACTTTTCCAGGGCAGCT
CTTCTCATGTCTGATGCCCTGAATCGAGCGGCCAAAGTTGCAGCTGACTTGGGTAGTCGTGGTCTTGAACAT
Protein sequenceShow/hide protein sequence
MNPGGYTVEVTGLSPKATEKDVFDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSGATIVDQRVYITRWGHFDDEFGFWSRPSGHHEEDSRSTSPQRSQFA
ASAGSAVTMAQEVVKTMLAMGYVLGKDALIKAKAFDESHQVSATAAAKVADLSQRIGLTDMIGAGFEAVKTMDEKYHVSQTTKSAISATGRTAAAAADTVVRSSYFSRAA
LLMSDALNRAAKVAADLGSRGLEH