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MS015160 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015160
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionhistone-lysine N-methyltransferase SETD1A
Genome locationscaffold2:1564313..1564810
RNA-Seq ExpressionMS015160
SyntenyMS015160
Gene Ontology termsGO:0032259 - methylation (biological process)
GO:0008168 - methyltransferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601423.1 hypothetical protein SDJN03_06656, partial [Cucurbita argyrosperma subsp. sororia]6.3e-3459.67Show/hide
Query:  VASKRQREDAQIDEDMSEGEDLKRQKSYNQIMSLLEEEEEEAIEDLSSIITTLQQEIICSPD------------QNSQQNAHPSTTTTPTNNDSSSSSSS
        +ASKRQR++AQ+ E+MSEGE+LKRQKSY+QI+SLLEEEEEEA+EDLSSII++LQQEI  S              QN+ Q A            S    +S
Subjt:  VASKRQREDAQIDEDMSEGEDLKRQKSYNQIMSLLEEEEEEAIEDLSSIITTLQQEIICSPD------------QNSQQNAHPSTTTTPTNNDSSSSSSS

Query:  CSSAASPSTKEDE-EERERVMRHLLEASDDELGLGLGLGIPNGEFLVEE--QGVSSLCDALWELEDEAANYYTLFQSQLFM
        C   +S S  E+E  ERERVMRHLLEASDDE      LGIPN EF+V E   GV +LCDALWELEDEAANYYTLF SQLFM
Subjt:  CSSAASPSTKEDE-EERERVMRHLLEASDDELGLGLGLGIPNGEFLVEE--QGVSSLCDALWELEDEAANYYTLFQSQLFM

XP_008446332.1 PREDICTED: histone-lysine N-methyltransferase SETD1A [Cucumis melo]1.3e-3461.96Show/hide
Query:  VASKRQREDAQIDEDMSEGEDLKRQKSYNQIMSLL---EEEEEEAIEDLSSIITTLQQEI---ICSPDQNSQQN-AHP-STTTTPTNNDSSSSSSSCSSA
        +ASKRQR DA+  ED+ EGE+LKRQKSYNQI+SLL   EE+EEE I+DLSSIITTLQQEI   I    Q +Q   AH  S +    ++ SSSSSSS SS+
Subjt:  VASKRQREDAQIDEDMSEGEDLKRQKSYNQIMSLL---EEEEEEAIEDLSSIITTLQQEI---ICSPDQNSQQN-AHP-STTTTPTNNDSSSSSSSCSSA

Query:  ASPSTK--------EDEEERERVMRHLLEASDDELGLGLGLGIPNGEFLVEEQGVS--SLCDALWELEDEAANYYTLFQSQLFM
         + S K        E++ ERE+VMRHLLEASDDE      LGIPNGEF V + GV   +LCDALWELEDEAANYYTLFQSQLFM
Subjt:  ASPSTK--------EDEEERERVMRHLLEASDDELGLGLGLGIPNGEFLVEEQGVS--SLCDALWELEDEAANYYTLFQSQLFM

XP_011655674.1 histone-lysine N-methyltransferase SETD1A [Cucumis sativus]2.7e-3763.54Show/hide
Query:  VASKRQREDAQIDEDMSEGEDLKRQKSYNQIMSLLE--EEEEEAIEDLSSIITTLQQEIICSP---DQNSQQNAHPSTTTTPTNNDSSSSSSSCSSAASP
        +ASKRQR DA+I E++ EGE+LKRQKSYNQI+SLLE  EE+EE IEDLSSIITTLQQE I SP    Q +Q     S +    ++ SSSSSSS SS+ + 
Subjt:  VASKRQREDAQIDEDMSEGEDLKRQKSYNQIMSLLE--EEEEEAIEDLSSIITTLQQEIICSP---DQNSQQNAHPSTTTTPTNNDSSSSSSSCSSAASP

Query:  STK--------EDEEERERVMRHLLEASDDELGLGLGLGIPNGEFLVEEQGVS--SLCDALWELEDEAANYYTLFQSQLFM
        S K        E+E ERE+VMRHLLEASDDE      LGIPNGEF V + GV   +LCDALWELEDEAANYYTLFQSQLFM
Subjt:  STK--------EDEEERERVMRHLLEASDDELGLGLGLGIPNGEFLVEEQGVS--SLCDALWELEDEAANYYTLFQSQLFM

XP_022151083.1 histone-lysine N-methyltransferase SETD1A [Momordica charantia]5.1e-7698.8Show/hide
Query:  VASKRQREDAQIDEDMSEGEDLKRQKSYNQIMSLLEEEEEEAIEDLSSIITTLQQEIICSPDQNSQQNAHPSTTTTPTNNDSSSSSSSCSSAASPSTKED
        VASKRQREDAQIDEDMSEGEDLKRQKSYNQIMSLLEEEEEEAIEDLSSIITTLQQEIICSPDQNSQQNAHPSTTTTPTNNDSSSSSSSCSSAASPSTKED
Subjt:  VASKRQREDAQIDEDMSEGEDLKRQKSYNQIMSLLEEEEEEAIEDLSSIITTLQQEIICSPDQNSQQNAHPSTTTTPTNNDSSSSSSSCSSAASPSTKED

Query:  EEERERVMRHLLEASDDELGLGLGLGIPNGEFLVEEQGVSSLCDALWELEDEAANYYTLFQSQLFM
        EEERERVMRHLLEASDDE  LGLGLGIPNGEFLVEEQGVSSLCDALWELEDEAANYYTLFQSQLFM
Subjt:  EEERERVMRHLLEASDDELGLGLGLGIPNGEFLVEEQGVSSLCDALWELEDEAANYYTLFQSQLFM

XP_023551025.1 uncharacterized protein LOC111808979 [Cucurbita pepo subsp. pepo]4.8e-3456.15Show/hide
Query:  VASKRQREDAQIDEDMSEGEDLKRQKSYNQIMSLLEEEEEEAIEDLSSIITTLQQEIICSPDQNSQQNAHPSTTTTPTNNDSSSS---------------
        +ASKRQR++AQ+ E+MSEGE+LKRQKSY+QI+SLLEEEEEEA+EDLSSII++LQ+EI  S   +S  ++  ST   P +  +++                
Subjt:  VASKRQREDAQIDEDMSEGEDLKRQKSYNQIMSLLEEEEEEAIEDLSSIITTLQQEIICSPDQNSQQNAHPSTTTTPTNNDSSSS---------------

Query:  ----SSSCSSAASPSTKEDEEERERVMRHLLEASDDELGLGLGLGIPNGEFLVEE--QGVSSLCDALWELEDEAANYYTLFQSQLFM
             S C S++S   +E+  ERERVMRHLLEASDDE      LGIPN EF+V E   GV +LCDALWELEDEAANYYTLF SQLFM
Subjt:  ----SSSCSSAASPSTKEDEEERERVMRHLLEASDDELGLGLGLGIPNGEFLVEE--QGVSSLCDALWELEDEAANYYTLFQSQLFM

TrEMBL top hitse value%identityAlignment
A0A1S3BFM2 histone-lysine N-methyltransferase SETD1A6.2e-3561.96Show/hide
Query:  VASKRQREDAQIDEDMSEGEDLKRQKSYNQIMSLL---EEEEEEAIEDLSSIITTLQQEI---ICSPDQNSQQN-AHP-STTTTPTNNDSSSSSSSCSSA
        +ASKRQR DA+  ED+ EGE+LKRQKSYNQI+SLL   EE+EEE I+DLSSIITTLQQEI   I    Q +Q   AH  S +    ++ SSSSSSS SS+
Subjt:  VASKRQREDAQIDEDMSEGEDLKRQKSYNQIMSLL---EEEEEEAIEDLSSIITTLQQEI---ICSPDQNSQQN-AHP-STTTTPTNNDSSSSSSSCSSA

Query:  ASPSTK--------EDEEERERVMRHLLEASDDELGLGLGLGIPNGEFLVEEQGVS--SLCDALWELEDEAANYYTLFQSQLFM
         + S K        E++ ERE+VMRHLLEASDDE      LGIPNGEF V + GV   +LCDALWELEDEAANYYTLFQSQLFM
Subjt:  ASPSTK--------EDEEERERVMRHLLEASDDELGLGLGLGIPNGEFLVEEQGVS--SLCDALWELEDEAANYYTLFQSQLFM

A0A5D3D3N5 Histone-lysine N-methyltransferase SETD1A6.2e-3561.96Show/hide
Query:  VASKRQREDAQIDEDMSEGEDLKRQKSYNQIMSLL---EEEEEEAIEDLSSIITTLQQEI---ICSPDQNSQQN-AHP-STTTTPTNNDSSSSSSSCSSA
        +ASKRQR DA+  ED+ EGE+LKRQKSYNQI+SLL   EE+EEE I+DLSSIITTLQQEI   I    Q +Q   AH  S +    ++ SSSSSSS SS+
Subjt:  VASKRQREDAQIDEDMSEGEDLKRQKSYNQIMSLL---EEEEEEAIEDLSSIITTLQQEI---ICSPDQNSQQN-AHP-STTTTPTNNDSSSSSSSCSSA

Query:  ASPSTK--------EDEEERERVMRHLLEASDDELGLGLGLGIPNGEFLVEEQGVS--SLCDALWELEDEAANYYTLFQSQLFM
         + S K        E++ ERE+VMRHLLEASDDE      LGIPNGEF V + GV   +LCDALWELEDEAANYYTLFQSQLFM
Subjt:  ASPSTK--------EDEEERERVMRHLLEASDDELGLGLGLGIPNGEFLVEEQGVS--SLCDALWELEDEAANYYTLFQSQLFM

A0A6J1DB83 histone-lysine N-methyltransferase SETD1A2.5e-7698.8Show/hide
Query:  VASKRQREDAQIDEDMSEGEDLKRQKSYNQIMSLLEEEEEEAIEDLSSIITTLQQEIICSPDQNSQQNAHPSTTTTPTNNDSSSSSSSCSSAASPSTKED
        VASKRQREDAQIDEDMSEGEDLKRQKSYNQIMSLLEEEEEEAIEDLSSIITTLQQEIICSPDQNSQQNAHPSTTTTPTNNDSSSSSSSCSSAASPSTKED
Subjt:  VASKRQREDAQIDEDMSEGEDLKRQKSYNQIMSLLEEEEEEAIEDLSSIITTLQQEIICSPDQNSQQNAHPSTTTTPTNNDSSSSSSSCSSAASPSTKED

Query:  EEERERVMRHLLEASDDELGLGLGLGIPNGEFLVEEQGVSSLCDALWELEDEAANYYTLFQSQLFM
        EEERERVMRHLLEASDDE  LGLGLGIPNGEFLVEEQGVSSLCDALWELEDEAANYYTLFQSQLFM
Subjt:  EEERERVMRHLLEASDDELGLGLGLGIPNGEFLVEEQGVSSLCDALWELEDEAANYYTLFQSQLFM

A0A6J1H1H5 uncharacterized protein LOC1114587172.6e-3357.53Show/hide
Query:  VASKRQREDAQIDEDMSEGEDLKRQKSYNQIMSLLEEEEEEAIEDLSSIITTLQQEIICSPD-----------------QNSQQNAHPSTTTTPTNNDSS
        +ASKRQR++AQ+ E+MSEGE+LKRQKSY+QI+SLLEEEEEEA+EDLSSII++LQQEI  S                   QN+ Q A            S 
Subjt:  VASKRQREDAQIDEDMSEGEDLKRQKSYNQIMSLLEEEEEEAIEDLSSIITTLQQEIICSPD-----------------QNSQQNAHPSTTTTPTNNDSS

Query:  SSSSSCSSAASPSTKEDE-EERERVMRHLLEASDDELGLGLGLGIPNGEFLVEE--QGVSSLCDALWELEDEAANYYTLFQSQLFM
           +SC  ++S S  E+E  ERERVMRHLLEASDDE      LGIPN EF+V E   GV +LCDALWELEDEAANYYTLF SQLF+
Subjt:  SSSSSCSSAASPSTKEDE-EERERVMRHLLEASDDELGLGLGLGIPNGEFLVEE--QGVSSLCDALWELEDEAANYYTLFQSQLFM

A0A6J1JJY7 uncharacterized protein LOC1114851172.6e-3356.54Show/hide
Query:  VASKRQREDAQIDEDMSEGEDLKRQKSYNQIMSLLEEEEEEAIEDLSSIITTLQQEIICSPD----------------------QNSQQNAHPSTTTTPT
        +ASKRQR++AQ+ E+MSEGE++KRQKSYNQI+SLLEEEEEEA+EDLSSII++LQQEI  S                        QN+ Q A         
Subjt:  VASKRQREDAQIDEDMSEGEDLKRQKSYNQIMSLLEEEEEEAIEDLSSIITTLQQEIICSPD----------------------QNSQQNAHPSTTTTPT

Query:  NNDSSSSSSSCSSAASPSTKEDE-EERERVMRHLLEASDDELGLGLGLGIPNGEFLVEE--QGVSSLCDALWELEDEAANYYTLFQSQLFM
           S    +SC   +S S  E+E  ERERVMRHLLEASDDE      LGIPN EF+V E   GV +LCDALWELEDEAANYYTLF SQLFM
Subjt:  NNDSSSSSSSCSSAASPSTKEDE-EERERVMRHLLEASDDELGLGLGLGIPNGEFLVEE--QGVSSLCDALWELEDEAANYYTLFQSQLFM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G26920.1 unknown protein2.0e-1441.9Show/hide
Query:  KRQREDAQIDEDMSEGEDLKRQK--------SYNQIMSLL--EEEEEEAIEDLSSIITTLQQEIICSPDQNSQQNAHPSTTTTPTNNDSSSSSSSCSSAA
        KR RE     E + E E  KRQK        SYNQI+ LL   +E+ +   DL+S I  LQQE I S DQ +          + T+N   S SS  S   
Subjt:  KRQREDAQIDEDMSEGEDLKRQK--------SYNQIMSLL--EEEEEEAIEDLSSIITTLQQEIICSPDQNSQQNAHPSTTTTPTNNDSSSSSSSCSSAA

Query:  SPSTKEDEEERERVMRHLLEASDDELGL-GLGLGIPNGE-----FLVEEQGVSSLCDALWELEDEAANYYTLFQSQLFM
        S   + +++ +E+VM+HLLEASDDELG+     G  N E     ++  +  +    DA WELEDEAANYYTL QS+LFM
Subjt:  SPSTKEDEEERERVMRHLLEASDDELGL-GLGLGIPNGE-----FLVEEQGVSSLCDALWELEDEAANYYTLFQSQLFM

AT1G69760.1 unknown protein3.3e-2046.96Show/hide
Query:  KRQREDAQIDEDMSEGEDLKRQK------SYNQIMSLLEEEEEEAIEDLSSIITTLQQEIICSPDQNSQQNAHPSTTTTPTNNDSSSSSSSCSSAASPST
        KRQR D Q  E +   E+ KRQK      SYNQ+++LL++E E    D++S+ITTLQQEI      N +QNA         ++  SSSSSSC+S      
Subjt:  KRQREDAQIDEDMSEGEDLKRQK------SYNQIMSLLEEEEEEAIEDLSSIITTLQQEIICSPDQNSQQNAHPSTTTTPTNNDSSSSSSSCSSAASPST

Query:  KEDE--EERERVMRHLLEASDDELGL-GLGLGIPNGEFLVEEQGVS-----SLCD----ALWELEDEAANYYTLFQSQLFM
        KEDE   ++E+VM+HLLEA+DDELG+     G  N E +  E         SL D     LWELEDEAANYYTL QS+LFM
Subjt:  KEDE--EERERVMRHLLEASDDELGL-GLGLGIPNGEFLVEEQGVS-----SLCD----ALWELEDEAANYYTLFQSQLFM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTGGCCTCAAAACGGCAAAGGGAGGATGCCCAAATTGACGAAGACATGAGCGAAGGCGAGGACTTGAAACGCCAAAAATCATACAACCAAATCATGTCCCTGTTGGAGGA
AGAGGAGGAGGAAGCCATAGAGGATTTGTCCTCAATAATCACCACACTCCAACAAGAAATTATCTGCTCGCCCGACCAAAACAGCCAACAAAACGCCCACCCCTCCACCA
CAACAACACCAACCAATAATGATTCCTCTTCTTCTTCTTCCTCTTGCTCTTCTGCTGCGTCTCCTTCCACAAAGGAGGACGAGGAGGAGAGAGAGAGAGTGATGAGACAC
CTTCTAGAAGCTTCCGATGACGAGCTGGGGCTGGGGCTGGGGCTGGGGATTCCAAACGGTGAGTTTTTGGTGGAAGAGCAAGGAGTTTCTTCGTTGTGTGATGCGCTGTG
GGAGTTGGAAGATGAGGCTGCTAATTACTACACCTTGTTTCAGTCTCAGCTTTTCATG
mRNA sequenceShow/hide mRNA sequence
GTGGCCTCAAAACGGCAAAGGGAGGATGCCCAAATTGACGAAGACATGAGCGAAGGCGAGGACTTGAAACGCCAAAAATCATACAACCAAATCATGTCCCTGTTGGAGGA
AGAGGAGGAGGAAGCCATAGAGGATTTGTCCTCAATAATCACCACACTCCAACAAGAAATTATCTGCTCGCCCGACCAAAACAGCCAACAAAACGCCCACCCCTCCACCA
CAACAACACCAACCAATAATGATTCCTCTTCTTCTTCTTCCTCTTGCTCTTCTGCTGCGTCTCCTTCCACAAAGGAGGACGAGGAGGAGAGAGAGAGAGTGATGAGACAC
CTTCTAGAAGCTTCCGATGACGAGCTGGGGCTGGGGCTGGGGCTGGGGATTCCAAACGGTGAGTTTTTGGTGGAAGAGCAAGGAGTTTCTTCGTTGTGTGATGCGCTGTG
GGAGTTGGAAGATGAGGCTGCTAATTACTACACCTTGTTTCAGTCTCAGCTTTTCATG
Protein sequenceShow/hide protein sequence
VASKRQREDAQIDEDMSEGEDLKRQKSYNQIMSLLEEEEEEAIEDLSSIITTLQQEIICSPDQNSQQNAHPSTTTTPTNNDSSSSSSSCSSAASPSTKEDEEERERVMRH
LLEASDDELGLGLGLGIPNGEFLVEEQGVSSLCDALWELEDEAANYYTLFQSQLFM