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MS015172 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015172
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionAmino acid transporter, putative
Genome locationscaffold2:1637538..1637775
RNA-Seq ExpressionMS015172
SyntenyMS015172
Gene Ontology termsGO:0006810 - transport (biological process)
GO:0009987 - cellular process (biological process)
GO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601432.1 Amino acid transporter AVT1J, partial [Cucurbita argyrosperma subsp. sororia]1.5e-1257.32Show/hide
Query:  LDGNLLVKTYPNIGMLAFGNKIKALVSIFVYLKLYLVALEFFILEGDG--QPFPSPSQNRESI-VEGKKMFMLPTAFLILPT
        +D N  V+TYP+IG LAFG K K +VSIFVY++LYLVA+EF ILEGD   + FPS      S+ VEGK+M+M+  A  ILPT
Subjt:  LDGNLLVKTYPNIGMLAFGNKIKALVSIFVYLKLYLVALEFFILEGDG--QPFPSPSQNRESI-VEGKKMFMLPTAFLILPT

KAG7032216.1 Amino acid transporter AVT1J, partial [Cucurbita argyrosperma subsp. argyrosperma]1.9e-1256.1Show/hide
Query:  LDGNLLVKTYPNIGMLAFGNKIKALVSIFVYLKLYLVALEFFILEGDG--QPFPSPSQNRESI-VEGKKMFMLPTAFLILPT
        +D N  V+TYP+IG LAFG K K +VS+FVY++LYLVA+EF ILEGD   + FPS      S+ VEGK+M+M+  A  ILPT
Subjt:  LDGNLLVKTYPNIGMLAFGNKIKALVSIFVYLKLYLVALEFFILEGDG--QPFPSPSQNRESI-VEGKKMFMLPTAFLILPT

XP_009360335.1 PREDICTED: vacuolar amino acid transporter 1-like [Pyrus x bretschneideri]1.9e-1254.88Show/hide
Query:  LDGNLLVKTYPNIGMLAFGNKIKALVSIFVYLKLYLVALEFFILEGD--GQPFPSPSQNRESI-VEGKKMFMLPTAFLILPT
        +DGN  +K+YPNIG  A+G K +  +SIF+YL+LYLVA+EF ILEGD   Q FPS   N   + V GK+ F+L TA +ILPT
Subjt:  LDGNLLVKTYPNIGMLAFGNKIKALVSIFVYLKLYLVALEFFILEGD--GQPFPSPSQNRESI-VEGKKMFMLPTAFLILPT

XP_022957374.1 amino acid transporter AVT1J-like isoform X2 [Cucurbita moschata]1.9e-1256.1Show/hide
Query:  LDGNLLVKTYPNIGMLAFGNKIKALVSIFVYLKLYLVALEFFILEGDG--QPFPSPSQNRESI-VEGKKMFMLPTAFLILPT
        +D N  V+TYP+IG LAFG K K +VS+FVY++LYLVA+EF ILEGD   + FPS      S+ VEGK+M+M+  A  ILPT
Subjt:  LDGNLLVKTYPNIGMLAFGNKIKALVSIFVYLKLYLVALEFFILEGDG--QPFPSPSQNRESI-VEGKKMFMLPTAFLILPT

XP_023512552.1 amino acid transporter AVT1I-like [Cucurbita pepo subsp. pepo]6.5e-1357.32Show/hide
Query:  LDGNLLVKTYPNIGMLAFGNKIKALVSIFVYLKLYLVALEFFILEGDG--QPFPSPSQNRESI-VEGKKMFMLPTAFLILPT
        +D N  V+TYP+IG LAFG K K +VS+FVY++LYLVA+EF ILEGD   + FPS      S+ VEGK+M+M+  A LILPT
Subjt:  LDGNLLVKTYPNIGMLAFGNKIKALVSIFVYLKLYLVALEFFILEGDG--QPFPSPSQNRESI-VEGKKMFMLPTAFLILPT

TrEMBL top hitse value%identityAlignment
A0A2P6R2Z7 Putative amino acid transporter, transmembrane domain-containing protein2.0e-1253.66Show/hide
Query:  LDGNLLVKTYPNIGMLAFGNKIKALVSIFVYLKLYLVALEFFILEGD--GQPFPSPSQNRES-IVEGKKMFMLPTAFLILPT
        +D N  +KTYP+IG  AFG K +  +SIF+YL+LYLVA+EF ILEGD   Q FP+ S N     + GK+ F+L TA +ILPT
Subjt:  LDGNLLVKTYPNIGMLAFGNKIKALVSIFVYLKLYLVALEFFILEGD--GQPFPSPSQNRES-IVEGKKMFMLPTAFLILPT

A0A498HGS6 Aa_trans domain-containing protein2.0e-1254.88Show/hide
Query:  LDGNLLVKTYPNIGMLAFGNKIKALVSIFVYLKLYLVALEFFILEGD--GQPFPSPSQNRESI-VEGKKMFMLPTAFLILPT
        +DGN  +K+YP+IG +A+G K K  +SIF+YL+LYLVA+EF ILEGD   Q FPS   N     V GK+ F+L TA +ILPT
Subjt:  LDGNLLVKTYPNIGMLAFGNKIKALVSIFVYLKLYLVALEFFILEGD--GQPFPSPSQNRESI-VEGKKMFMLPTAFLILPT

A0A5N5HEC7 Vacuolar amino acid transporter 1-like9.2e-1354.88Show/hide
Query:  LDGNLLVKTYPNIGMLAFGNKIKALVSIFVYLKLYLVALEFFILEGD--GQPFPSPSQNRESI-VEGKKMFMLPTAFLILPT
        +DGN  +K+YPNIG  A+G K +  +SIF+YL+LYLVA+EF ILEGD   Q FPS   N   + V GK+ F+L TA +ILPT
Subjt:  LDGNLLVKTYPNIGMLAFGNKIKALVSIFVYLKLYLVALEFFILEGD--GQPFPSPSQNRESI-VEGKKMFMLPTAFLILPT

A0A6J1H012 amino acid transporter AVT1J-like isoform X19.2e-1356.1Show/hide
Query:  LDGNLLVKTYPNIGMLAFGNKIKALVSIFVYLKLYLVALEFFILEGDG--QPFPSPSQNRESI-VEGKKMFMLPTAFLILPT
        +D N  V+TYP+IG LAFG K K +VS+FVY++LYLVA+EF ILEGD   + FPS      S+ VEGK+M+M+  A  ILPT
Subjt:  LDGNLLVKTYPNIGMLAFGNKIKALVSIFVYLKLYLVALEFFILEGDG--QPFPSPSQNRESI-VEGKKMFMLPTAFLILPT

A0A6J1H1R5 amino acid transporter AVT1J-like isoform X29.2e-1356.1Show/hide
Query:  LDGNLLVKTYPNIGMLAFGNKIKALVSIFVYLKLYLVALEFFILEGDG--QPFPSPSQNRESI-VEGKKMFMLPTAFLILPT
        +D N  V+TYP+IG LAFG K K +VS+FVY++LYLVA+EF ILEGD   + FPS      S+ VEGK+M+M+  A  ILPT
Subjt:  LDGNLLVKTYPNIGMLAFGNKIKALVSIFVYLKLYLVALEFFILEGDG--QPFPSPSQNRESI-VEGKKMFMLPTAFLILPT

SwissProt top hitse value%identityAlignment
F4IUW3 Amino acid transporter AVT1C8.0e-0635.37Show/hide
Query:  LDGNLLVKTYPNIGMLAFGNKIKALVSIFVYLKLYLVALEFFILEGD--GQPFPSPSQNRESI-VEGKKMFMLPTAFLILPT
        LD    ++TYP+IG  AFG   +  VSI +YL+LY   +E+ ILE D     +P+ + +     ++ + +F L T   +LPT
Subjt:  LDGNLLVKTYPNIGMLAFGNKIKALVSIFVYLKLYLVALEFFILEGD--GQPFPSPSQNRESI-VEGKKMFMLPTAFLILPT

F4J1Q9 Amino acid transporter AVT1I1.2e-0946.05Show/hide
Query:  VKTYPNIGMLAFGNKIKALVSIFVYLKLYLVALEFFILEGDGQPFPSPSQNRESI---VEGKKMFMLPTAFLILPT
        +KTYP+IG  AFG   + +VS+F++L+LYLV   F ILEGD      P    E I   + GK+ FM   AF+I+PT
Subjt:  VKTYPNIGMLAFGNKIKALVSIFVYLKLYLVALEFFILEGDGQPFPSPSQNRESI---VEGKKMFMLPTAFLILPT

F4JE35 Amino acid transporter AVT1B3.9e-0839.02Show/hide
Query:  LDGNLLVKTYPNIGMLAFGNKIKALVSIFVYLKLYLVALEFFILEGD--GQPFPSPSQNRESI-VEGKKMFMLPTAFLILPT
        LD +  V+TYP+IG  AFG+  + LVS+ +Y++LY +++E+ ILEGD     FP+ S +     ++  ++F L T   +LPT
Subjt:  LDGNLLVKTYPNIGMLAFGNKIKALVSIFVYLKLYLVALEFFILEGD--GQPFPSPSQNRESI-VEGKKMFMLPTAFLILPT

O80668 Amino acid transporter AVT1A6.2e-0639.19Show/hide
Query:  TYPNIGMLAFGNKIKALVSIFVYLKLYLVALEFFILEGDGQP--FPSPSQNRESI-VEGKKMFMLPTAFLILPT
        TYP+IG  AFG   + L+ + +Y +LY   +EF ILEGD     FP  S +     ++ K +F + TA ++LPT
Subjt:  TYPNIGMLAFGNKIKALVSIFVYLKLYLVALEFFILEGDGQP--FPSPSQNRESI-VEGKKMFMLPTAFLILPT

Q9LXF8 Amino acid transporter AVT1J2.0e-0945.45Show/hide
Query:  LVKTYPNIGMLAFGNKIKALVSIFVYLKLYLVALEFFILEGD--GQPFPSPSQNRESI-VEGKKMFMLPTAFLILPT
        L+++YP+IG  AFGN  + +VSIF+ L+LYLVA  F ILEGD   + F +   N   +  +GK+MF++  A +ILP+
Subjt:  LVKTYPNIGMLAFGNKIKALVSIFVYLKLYLVALEFFILEGD--GQPFPSPSQNRESI-VEGKKMFMLPTAFLILPT

Arabidopsis top hitse value%identityAlignment
AT2G41190.1 Transmembrane amino acid transporter family protein4.4e-0739.19Show/hide
Query:  TYPNIGMLAFGNKIKALVSIFVYLKLYLVALEFFILEGDGQP--FPSPSQNRESI-VEGKKMFMLPTAFLILPT
        TYP+IG  AFG   + L+ + +Y +LY   +EF ILEGD     FP  S +     ++ K +F + TA ++LPT
Subjt:  TYPNIGMLAFGNKIKALVSIFVYLKLYLVALEFFILEGDGQP--FPSPSQNRESI-VEGKKMFMLPTAFLILPT

AT3G28960.1 Transmembrane amino acid transporter family protein8.5e-1146.05Show/hide
Query:  VKTYPNIGMLAFGNKIKALVSIFVYLKLYLVALEFFILEGDGQPFPSPSQNRESI---VEGKKMFMLPTAFLILPT
        +KTYP+IG  AFG   + +VS+F++L+LYLV   F ILEGD      P    E I   + GK+ FM   AF+I+PT
Subjt:  VKTYPNIGMLAFGNKIKALVSIFVYLKLYLVALEFFILEGDGQPFPSPSQNRESI---VEGKKMFMLPTAFLILPT

AT3G54830.1 Transmembrane amino acid transporter family protein2.7e-0939.02Show/hide
Query:  LDGNLLVKTYPNIGMLAFGNKIKALVSIFVYLKLYLVALEFFILEGD--GQPFPSPSQNRESI-VEGKKMFMLPTAFLILPT
        LD +  V+TYP+IG  AFG+  + LVS+ +Y++LY +++E+ ILEGD     FP+ S +     ++  ++F L T   +LPT
Subjt:  LDGNLLVKTYPNIGMLAFGNKIKALVSIFVYLKLYLVALEFFILEGD--GQPFPSPSQNRESI-VEGKKMFMLPTAFLILPT

AT5G15240.1 Transmembrane amino acid transporter family protein1.5e-1045.45Show/hide
Query:  LVKTYPNIGMLAFGNKIKALVSIFVYLKLYLVALEFFILEGD--GQPFPSPSQNRESI-VEGKKMFMLPTAFLILPT
        L+++YP+IG  AFGN  + +VSIF+ L+LYLVA  F ILEGD   + F +   N   +  +GK+MF++  A +ILP+
Subjt:  LVKTYPNIGMLAFGNKIKALVSIFVYLKLYLVALEFFILEGD--GQPFPSPSQNRESI-VEGKKMFMLPTAFLILPT

AT5G15240.2 Transmembrane amino acid transporter family protein2.6e-0759.52Show/hide
Query:  LVKTYPNIGMLAFGNKIKALVSIFVYLKLYLVALEFFILEGD
        L+++YP+IG  AFGN  + +VSIF+ L+LYLVA  F ILEGD
Subjt:  LVKTYPNIGMLAFGNKIKALVSIFVYLKLYLVALEFFILEGD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTGGATGGAAATCTCCTTGTGAAAACTTATCCTAATATTGGAATGCTGGCTTTTGGCAATAAAATAAAAGCACTGGTTTCAATTTTTGTTTATCTCAAGTTGTATTTGGT
GGCATTAGAATTCTTCATACTAGAAGGTGACGGACAACCTTTTCCAAGCCCGTCTCAAAATAGGGAGTCTATAGTTGAAGGAAAGAAGATGTTTATGCTGCCCACTGCAT
TTCTAATATTGCCCACC
mRNA sequenceShow/hide mRNA sequence
CTGGATGGAAATCTCCTTGTGAAAACTTATCCTAATATTGGAATGCTGGCTTTTGGCAATAAAATAAAAGCACTGGTTTCAATTTTTGTTTATCTCAAGTTGTATTTGGT
GGCATTAGAATTCTTCATACTAGAAGGTGACGGACAACCTTTTCCAAGCCCGTCTCAAAATAGGGAGTCTATAGTTGAAGGAAAGAAGATGTTTATGCTGCCCACTGCAT
TTCTAATATTGCCCACC
Protein sequenceShow/hide protein sequence
LDGNLLVKTYPNIGMLAFGNKIKALVSIFVYLKLYLVALEFFILEGDGQPFPSPSQNRESIVEGKKMFMLPTAFLILPT