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MS015173 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015173
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionAmino acid transporter AVT1I
Genome locationscaffold2:1640637..1641036
RNA-Seq ExpressionMS015173
SyntenyMS015173
Gene Ontology termsGO:0006810 - transport (biological process)
GO:0009987 - cellular process (biological process)
GO:0005886 - plasma membrane (cellular component)
InterPro domainsIPR013057 - Amino acid transporter, transmembrane domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601432.1 Amino acid transporter AVT1J, partial [Cucurbita argyrosperma subsp. sororia]7.3e-3367.94Show/hide
Query:  KSQVTLNLPIHKISTRIAIRPILINLIGKYATTGNPISSAIEDV--WSATWMKSILIITLLLVTN-IVALSIPFFKYVMAFTGTFLSATTSIMIPCLCYL
        KSQVTLNLP  K ST++AI   LIN I KYA   NPI+ AIE+     AT   +IL+ TLLL T  I+ALSIPFF YVMAFTG FLS T  I+IPCLCYL
Subjt:  KSQVTLNLPIHKISTRIAIRPILINLIGKYATTGNPISSAIEDV--WSATWMKSILIITLLLVTN-IVALSIPFFKYVMAFTGTFLSATTSIMIPCLCYL

Query:  KKNKSARKFGWELMIIVGILVMGFSVALLGT
        K NKSARKFGWEL++IVGILVMGFSV +LGT
Subjt:  KKNKSARKFGWELMIIVGILVMGFSVALLGT

KAG7032216.1 Amino acid transporter AVT1J, partial [Cucurbita argyrosperma subsp. argyrosperma]7.3e-3367.94Show/hide
Query:  KSQVTLNLPIHKISTRIAIRPILINLIGKYATTGNPISSAIEDV--WSATWMKSILIITLLLVTN-IVALSIPFFKYVMAFTGTFLSATTSIMIPCLCYL
        KSQVTLNLP  K ST++AI   LIN I KYA   NPI+ AIE+     AT   +IL+ TLLL T  I+ALSIPFF YVMAFTG FLS T  I+IPCLCYL
Subjt:  KSQVTLNLPIHKISTRIAIRPILINLIGKYATTGNPISSAIEDV--WSATWMKSILIITLLLVTN-IVALSIPFFKYVMAFTGTFLSATTSIMIPCLCYL

Query:  KKNKSARKFGWELMIIVGILVMGFSVALLGT
        K NKSARKFGWEL++IVGILVMGFSV +LGT
Subjt:  KKNKSARKFGWELMIIVGILVMGFSVALLGT

XP_022986253.1 amino acid transporter AVT1I-like isoform X1 [Cucurbita maxima]6.6e-3469.47Show/hide
Query:  KSQVTLNLPIHKISTRIAIRPILINLIGKYATTGNPISSAIEDV--WSATWMKSILIITLLLVTN-IVALSIPFFKYVMAFTGTFLSATTSIMIPCLCYL
        KSQVTLNLP HK ST+IAI   LIN I KYA   NPI+ AIE+     AT   +IL+ TLLL T  I+ALSIPFF YVMAFTG FLS T  I+IPCLCYL
Subjt:  KSQVTLNLPIHKISTRIAIRPILINLIGKYATTGNPISSAIEDV--WSATWMKSILIITLLLVTN-IVALSIPFFKYVMAFTGTFLSATTSIMIPCLCYL

Query:  KKNKSARKFGWELMIIVGILVMGFSVALLGT
        K NKSARKFGWEL++IVGILVMGFSV +LGT
Subjt:  KKNKSARKFGWELMIIVGILVMGFSVALLGT

XP_022986262.1 amino acid transporter AVT1I-like isoform X2 [Cucurbita maxima]6.6e-3469.47Show/hide
Query:  KSQVTLNLPIHKISTRIAIRPILINLIGKYATTGNPISSAIEDV--WSATWMKSILIITLLLVTN-IVALSIPFFKYVMAFTGTFLSATTSIMIPCLCYL
        KSQVTLNLP HK ST+IAI   LIN I KYA   NPI+ AIE+     AT   +IL+ TLLL T  I+ALSIPFF YVMAFTG FLS T  I+IPCLCYL
Subjt:  KSQVTLNLPIHKISTRIAIRPILINLIGKYATTGNPISSAIEDV--WSATWMKSILIITLLLVTN-IVALSIPFFKYVMAFTGTFLSATTSIMIPCLCYL

Query:  KKNKSARKFGWELMIIVGILVMGFSVALLGT
        K NKSARKFGWEL++IVGILVMGFSV +LGT
Subjt:  KKNKSARKFGWELMIIVGILVMGFSVALLGT

XP_023512552.1 amino acid transporter AVT1I-like [Cucurbita pepo subsp. pepo]5.0e-3469.47Show/hide
Query:  KSQVTLNLPIHKISTRIAIRPILINLIGKYATTGNPISSAIEDV--WSATWMKSILIITLLLVTN-IVALSIPFFKYVMAFTGTFLSATTSIMIPCLCYL
        KSQVTLNLP HK ST+IAI   LIN I KYA   NPI+ AIE+     AT   +IL+ TLLL T  I+ALSIPFF YVMAFTG FLS T  I+IPCLCYL
Subjt:  KSQVTLNLPIHKISTRIAIRPILINLIGKYATTGNPISSAIEDV--WSATWMKSILIITLLLVTN-IVALSIPFFKYVMAFTGTFLSATTSIMIPCLCYL

Query:  KKNKSARKFGWELMIIVGILVMGFSVALLGT
        K NKSARKFGWEL++IVGILVMGFSV +LGT
Subjt:  KKNKSARKFGWELMIIVGILVMGFSVALLGT

TrEMBL top hitse value%identityAlignment
A0A1S3BED5 vacuolar amino acid transporter 1-like2.3e-3265.67Show/hide
Query:  KSQVTLNLPIHKISTRIAIRPILINLIGKYATTGNPISSAIEDVWS-----ATWMKSILIITLLLVTN-IVALSIPFFKYVMAFTGTFLSATTSIMIPCL
        KSQVTLNLP++KIST++AI   LIN I KYA   NPI+ AIED  S      T   +ILI TLLL+T  I+AL IPFF YVMAFTG+FLS TTSI+IPCL
Subjt:  KSQVTLNLPIHKISTRIAIRPILINLIGKYATTGNPISSAIEDVWS-----ATWMKSILIITLLLVTN-IVALSIPFFKYVMAFTGTFLSATTSIMIPCL

Query:  CYLKKNKSARKFGWELMIIVGILVMGFSVALLGT
        CYLK NKSAR+FGWEL++IV ILV+G  V +LGT
Subjt:  CYLKKNKSARKFGWELMIIVGILVMGFSVALLGT

A0A6J1H012 amino acid transporter AVT1J-like isoform X13.5e-3367.94Show/hide
Query:  KSQVTLNLPIHKISTRIAIRPILINLIGKYATTGNPISSAIEDV--WSATWMKSILIITLLLVTN-IVALSIPFFKYVMAFTGTFLSATTSIMIPCLCYL
        KSQVTLNLP  K ST++AI   LIN I KYA   NPI+ AIE+     AT   +IL+ TLLL T  I+ALSIPFF YVMAFTG FLS T  I+IPCLCYL
Subjt:  KSQVTLNLPIHKISTRIAIRPILINLIGKYATTGNPISSAIEDV--WSATWMKSILIITLLLVTN-IVALSIPFFKYVMAFTGTFLSATTSIMIPCLCYL

Query:  KKNKSARKFGWELMIIVGILVMGFSVALLGT
        K NKSARKFGWEL++IVGILVMGFSV +LGT
Subjt:  KKNKSARKFGWELMIIVGILVMGFSVALLGT

A0A6J1H1R5 amino acid transporter AVT1J-like isoform X23.5e-3367.94Show/hide
Query:  KSQVTLNLPIHKISTRIAIRPILINLIGKYATTGNPISSAIEDV--WSATWMKSILIITLLLVTN-IVALSIPFFKYVMAFTGTFLSATTSIMIPCLCYL
        KSQVTLNLP  K ST++AI   LIN I KYA   NPI+ AIE+     AT   +IL+ TLLL T  I+ALSIPFF YVMAFTG FLS T  I+IPCLCYL
Subjt:  KSQVTLNLPIHKISTRIAIRPILINLIGKYATTGNPISSAIEDV--WSATWMKSILIITLLLVTN-IVALSIPFFKYVMAFTGTFLSATTSIMIPCLCYL

Query:  KKNKSARKFGWELMIIVGILVMGFSVALLGT
        K NKSARKFGWEL++IVGILVMGFSV +LGT
Subjt:  KKNKSARKFGWELMIIVGILVMGFSVALLGT

A0A6J1J733 amino acid transporter AVT1I-like isoform X23.2e-3469.47Show/hide
Query:  KSQVTLNLPIHKISTRIAIRPILINLIGKYATTGNPISSAIEDV--WSATWMKSILIITLLLVTN-IVALSIPFFKYVMAFTGTFLSATTSIMIPCLCYL
        KSQVTLNLP HK ST+IAI   LIN I KYA   NPI+ AIE+     AT   +IL+ TLLL T  I+ALSIPFF YVMAFTG FLS T  I+IPCLCYL
Subjt:  KSQVTLNLPIHKISTRIAIRPILINLIGKYATTGNPISSAIEDV--WSATWMKSILIITLLLVTN-IVALSIPFFKYVMAFTGTFLSATTSIMIPCLCYL

Query:  KKNKSARKFGWELMIIVGILVMGFSVALLGT
        K NKSARKFGWEL++IVGILVMGFSV +LGT
Subjt:  KKNKSARKFGWELMIIVGILVMGFSVALLGT

A0A6J1JG00 amino acid transporter AVT1I-like isoform X13.2e-3469.47Show/hide
Query:  KSQVTLNLPIHKISTRIAIRPILINLIGKYATTGNPISSAIEDV--WSATWMKSILIITLLLVTN-IVALSIPFFKYVMAFTGTFLSATTSIMIPCLCYL
        KSQVTLNLP HK ST+IAI   LIN I KYA   NPI+ AIE+     AT   +IL+ TLLL T  I+ALSIPFF YVMAFTG FLS T  I+IPCLCYL
Subjt:  KSQVTLNLPIHKISTRIAIRPILINLIGKYATTGNPISSAIEDV--WSATWMKSILIITLLLVTN-IVALSIPFFKYVMAFTGTFLSATTSIMIPCLCYL

Query:  KKNKSARKFGWELMIIVGILVMGFSVALLGT
        K NKSARKFGWEL++IVGILVMGFSV +LGT
Subjt:  KKNKSARKFGWELMIIVGILVMGFSVALLGT

SwissProt top hitse value%identityAlignment
F4IUW3 Amino acid transporter AVT1C5.8e-0930.5Show/hide
Query:  KSQVTLNLPIHKISTRIAIRPILINLIGKYATTGNPISSAIEDV---------WSATWMKSILIITLLLVTNIVALSIPFFKYVMAFTGTFLSATTSIMI
        +SQ TLNLP   I+T+IA+   ++N   KYA T +P++ ++E++         W A  ++++L+ + LL    V L+IPFF  VM+  G+ L+   ++++
Subjt:  KSQVTLNLPIHKISTRIAIRPILINLIGKYATTGNPISSAIEDV---------WSATWMKSILIITLLLVTNIVALSIPFFKYVMAFTGTFLSATTSIMI

Query:  PCLCYLKKNKSARKFGWELMIIVGILVMGFSVALLGTYFLL
        P  C+L   +  +    ++M+ V I+++G   +++G+Y  L
Subjt:  PCLCYLKKNKSARKFGWELMIIVGILVMGFSVALLGTYFLL

F4J1Q9 Amino acid transporter AVT1I4.3e-2041.18Show/hide
Query:  SQVTLNLPIHKISTRIAIRPILINLIGKYATTGNPISSAIEDVWSATWMKS----ILIITLLLVTNIV-ALSIPFFKYVMAFTGTFLSATTSIMIPCLCY
        SQ+TLNLPIHK S+++AI   L+N + KYA    P  + I+D + + + K     +LI T  +++++V A ++PFF Y+M+  G  LS T SI++PCLCY
Subjt:  SQVTLNLPIHKISTRIAIRPILINLIGKYATTGNPISSAIEDVWSATWMKS----ILIITLLLVTNIV-ALSIPFFKYVMAFTGTFLSATTSIMIPCLCY

Query:  LKKNKSARKFGWELMIIVGILVMGFSVALLGTYFLL
        LK   + +K G E +++ G++VM   V ++GTY  L
Subjt:  LKKNKSARKFGWELMIIVGILVMGFSVALLGTYFLL

Q8GYS4 Amino acid transporter AVT1D3.6e-1135.82Show/hide
Query:  KSQVTLNLPIHKISTRIAIRPILINLIGKYATTGNPISSAIEDVWSATWMK----SILIITLLLV-TNIVALSIPFFKYVMAFTGTFLSATTSIMIPCLC
        +SQ TLN+P H   +++A+   +I  + KYA T  PI  ++E++     M+    SIL  T+L+  T +VALS+PFF  V A  G+FL+   +++ PCLC
Subjt:  KSQVTLNLPIHKISTRIAIRPILINLIGKYATTGNPISSAIEDVWSATWMK----SILIITLLLV-TNIVALSIPFFKYVMAFTGTFLSATTSIMIPCLC

Query:  YLKKNKSARKFGWELMIIVGILVMGFSVALLGTY
        YL   K  +    ++ + + I+V G      GTY
Subjt:  YLKKNKSARKFGWELMIIVGILVMGFSVALLGTY

Q8LPF4 Amino acid transporter AVT1E8.1e-1133.82Show/hide
Query:  KSQVTLNLPIHKISTRIAIRPILINLIGKYATTGNPISSAIEDVWSATWMK------SILIITLL-LVTNIVALSIPFFKYVMAFTGTFLSATTSIMIPC
        +SQ TLN+P H  S++IA+   ++  + KYA T  P+  ++E++  ++  K      S+L  T+L L T +VAL++PFF  V A  G+F++   +++ PC
Subjt:  KSQVTLNLPIHKISTRIAIRPILINLIGKYATTGNPISSAIEDVWSATWMK------SILIITLL-LVTNIVALSIPFFKYVMAFTGTFLSATTSIMIPC

Query:  LCYLKKNKSARKFGWELMIIVGILVMGFSVALLGTY
        LCY+   K  R   +++ I + I+++G      GTY
Subjt:  LCYLKKNKSARKFGWELMIIVGILVMGFSVALLGTY

Q9LXF8 Amino acid transporter AVT1J6.2e-1940.3Show/hide
Query:  KSQVTLNLPIHKISTRIAIRPILINLIGKYATTGNPISSAIEDVWSATW----MKSILIITLLLVTN-IVALSIPFFKYVMAFTGTFLSATTSIMIPCLC
        +SQ+TLNLP  K+S+++AI   L+N I K+A    PI  A+   +S           L+ T+L+ +N IVAL +PFF  +M+  G FLSA+ S+++PCLC
Subjt:  KSQVTLNLPIHKISTRIAIRPILINLIGKYATTGNPISSAIEDVWSATW----MKSILIITLLLVTN-IVALSIPFFKYVMAFTGTFLSATTSIMIPCLC

Query:  YLKKNKSARKFGWELMIIVGILVMGFSVALLGTY
        YLK +   ++ G+E ++++GI + G  V + GTY
Subjt:  YLKKNKSARKFGWELMIIVGILVMGFSVALLGTY

Arabidopsis top hitse value%identityAlignment
AT3G28960.1 Transmembrane amino acid transporter family protein3.1e-2141.18Show/hide
Query:  SQVTLNLPIHKISTRIAIRPILINLIGKYATTGNPISSAIEDVWSATWMKS----ILIITLLLVTNIV-ALSIPFFKYVMAFTGTFLSATTSIMIPCLCY
        SQ+TLNLPIHK S+++AI   L+N + KYA    P  + I+D + + + K     +LI T  +++++V A ++PFF Y+M+  G  LS T SI++PCLCY
Subjt:  SQVTLNLPIHKISTRIAIRPILINLIGKYATTGNPISSAIEDVWSATWMKS----ILIITLLLVTNIV-ALSIPFFKYVMAFTGTFLSATTSIMIPCLCY

Query:  LKKNKSARKFGWELMIIVGILVMGFSVALLGTYFLL
        LK   + +K G E +++ G++VM   V ++GTY  L
Subjt:  LKKNKSARKFGWELMIIVGILVMGFSVALLGTYFLL

AT5G02170.1 Transmembrane amino acid transporter family protein5.8e-1233.82Show/hide
Query:  KSQVTLNLPIHKISTRIAIRPILINLIGKYATTGNPISSAIEDVWSATWMK------SILIITLL-LVTNIVALSIPFFKYVMAFTGTFLSATTSIMIPC
        +SQ TLN+P H  S++IA+   ++  + KYA T  P+  ++E++  ++  K      S+L  T+L L T +VAL++PFF  V A  G+F++   +++ PC
Subjt:  KSQVTLNLPIHKISTRIAIRPILINLIGKYATTGNPISSAIEDVWSATWMK------SILIITLL-LVTNIVALSIPFFKYVMAFTGTFLSATTSIMIPC

Query:  LCYLKKNKSARKFGWELMIIVGILVMGFSVALLGTY
        LCY+   K  R   +++ I + I+++G      GTY
Subjt:  LCYLKKNKSARKFGWELMIIVGILVMGFSVALLGTY

AT5G02180.1 Transmembrane amino acid transporter family protein2.6e-1235.82Show/hide
Query:  KSQVTLNLPIHKISTRIAIRPILINLIGKYATTGNPISSAIEDVWSATWMK----SILIITLLLV-TNIVALSIPFFKYVMAFTGTFLSATTSIMIPCLC
        +SQ TLN+P H   +++A+   +I  + KYA T  PI  ++E++     M+    SIL  T+L+  T +VALS+PFF  V A  G+FL+   +++ PCLC
Subjt:  KSQVTLNLPIHKISTRIAIRPILINLIGKYATTGNPISSAIEDVWSATWMK----SILIITLLLV-TNIVALSIPFFKYVMAFTGTFLSATTSIMIPCLC

Query:  YLKKNKSARKFGWELMIIVGILVMGFSVALLGTY
        YL   K  +    ++ + + I+V G      GTY
Subjt:  YLKKNKSARKFGWELMIIVGILVMGFSVALLGTY

AT5G15240.1 Transmembrane amino acid transporter family protein4.4e-2040.3Show/hide
Query:  KSQVTLNLPIHKISTRIAIRPILINLIGKYATTGNPISSAIEDVWSATW----MKSILIITLLLVTN-IVALSIPFFKYVMAFTGTFLSATTSIMIPCLC
        +SQ+TLNLP  K+S+++AI   L+N I K+A    PI  A+   +S           L+ T+L+ +N IVAL +PFF  +M+  G FLSA+ S+++PCLC
Subjt:  KSQVTLNLPIHKISTRIAIRPILINLIGKYATTGNPISSAIEDVWSATW----MKSILIITLLLVTN-IVALSIPFFKYVMAFTGTFLSATTSIMIPCLC

Query:  YLKKNKSARKFGWELMIIVGILVMGFSVALLGTY
        YLK +   ++ G+E ++++GI + G  V + GTY
Subjt:  YLKKNKSARKFGWELMIIVGILVMGFSVALLGTY

AT5G15240.2 Transmembrane amino acid transporter family protein4.4e-2040.3Show/hide
Query:  KSQVTLNLPIHKISTRIAIRPILINLIGKYATTGNPISSAIEDVWSATW----MKSILIITLLLVTN-IVALSIPFFKYVMAFTGTFLSATTSIMIPCLC
        +SQ+TLNLP  K+S+++AI   L+N I K+A    PI  A+   +S           L+ T+L+ +N IVAL +PFF  +M+  G FLSA+ S+++PCLC
Subjt:  KSQVTLNLPIHKISTRIAIRPILINLIGKYATTGNPISSAIEDVWSATW----MKSILIITLLLVTN-IVALSIPFFKYVMAFTGTFLSATTSIMIPCLC

Query:  YLKKNKSARKFGWELMIIVGILVMGFSVALLGTY
        YLK +   ++ G+E ++++GI + G  V + GTY
Subjt:  YLKKNKSARKFGWELMIIVGILVMGFSVALLGTY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAGTCACAAGTGACACTAAACCTTCCAATCCATAAAATCAGCACAAGAATAGCAATTCGCCCAATCCTCATCAATCTCATCGGCAAATATGCAACCACAGGCAACCCAAT
TTCTAGTGCCATAGAAGATGTATGGAGTGCCACTTGGATGAAGAGCATTCTCATCATAACTCTGCTGCTTGTCACAAACATAGTGGCTTTGTCCATTCCATTTTTCAAGT
ATGTTATGGCTTTCACAGGCACATTTCTAAGTGCCACCACCTCCATTATGATCCCATGTTTGTGCTACCTCAAGAAAAATAAATCCGCACGAAAATTTGGATGGGAATTG
ATGATCATTGTGGGAATTTTGGTGATGGGTTTTTCTGTTGCCCTCTTGGGTACTTATTTTCTTCTC
mRNA sequenceShow/hide mRNA sequence
AAGTCACAAGTGACACTAAACCTTCCAATCCATAAAATCAGCACAAGAATAGCAATTCGCCCAATCCTCATCAATCTCATCGGCAAATATGCAACCACAGGCAACCCAAT
TTCTAGTGCCATAGAAGATGTATGGAGTGCCACTTGGATGAAGAGCATTCTCATCATAACTCTGCTGCTTGTCACAAACATAGTGGCTTTGTCCATTCCATTTTTCAAGT
ATGTTATGGCTTTCACAGGCACATTTCTAAGTGCCACCACCTCCATTATGATCCCATGTTTGTGCTACCTCAAGAAAAATAAATCCGCACGAAAATTTGGATGGGAATTG
ATGATCATTGTGGGAATTTTGGTGATGGGTTTTTCTGTTGCCCTCTTGGGTACTTATTTTCTTCTC
Protein sequenceShow/hide protein sequence
KSQVTLNLPIHKISTRIAIRPILINLIGKYATTGNPISSAIEDVWSATWMKSILIITLLLVTNIVALSIPFFKYVMAFTGTFLSATTSIMIPCLCYLKKNKSARKFGWEL
MIIVGILVMGFSVALLGTYFLL