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MS015178 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015178
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRibosomal protein L2
Genome locationscaffold2:1652438..1652578
RNA-Seq ExpressionMS015178
SyntenyMS015178
Gene Ontology termsGO:0032543 - mitochondrial translation (biological process)
GO:0005762 - mitochondrial large ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
DAD25556.1 TPA_asm: hypothetical protein HUJ06_027020 [Nelumbo nucifera]1.1e-1282.98Show/hide
Query:  ETASLSFGNSFGFPRIEVVGAKPTFFALRMRTKLRGKNTFSLCEVQK
        ETASLSFG+SFGFPRI V GAKP FFA RMR KL+GKNTFSLCEV+K
Subjt:  ETASLSFGNSFGFPRIEVVGAKPTFFALRMRTKLRGKNTFSLCEVQK

QXX99528.1 ribosomal protein L2 [Macadamia integrifolia]1.1e-1282.98Show/hide
Query:  ETASLSFGNSFGFPRIEVVGAKPTFFALRMRTKLRGKNTFSLCEVQK
        ETASLSFG+SFGFPRI V GAKP FFA RMR K+RGKNTFSLCEV+K
Subjt:  ETASLSFGNSFGFPRIEVVGAKPTFFALRMRTKLRGKNTFSLCEVQK

WP_131747056.1 hypothetical protein [Candidatus Frankia meridionalis]1.1e-1282.98Show/hide
Query:  ETASLSFGNSFGFPRIEVVGAKPTFFALRMRTKLRGKNTFSLCEVQK
        ET+SLSFG+SFGFPRI V GAKP FFA RMR KLRGKNTFSLCEV+K
Subjt:  ETASLSFGNSFGFPRIEVVGAKPTFFALRMRTKLRGKNTFSLCEVQK

YP_003587229.1 ribosomal protein L2 [Citrullus lanatus]6.6e-1382.98Show/hide
Query:  ETASLSFGNSFGFPRIEVVGAKPTFFALRMRTKLRGKNTFSLCEVQK
        ETASLSFG+SFGFPR+ V GAKP FFA RMR KLRGKNTFSLCEV+K
Subjt:  ETASLSFGNSFGFPRIEVVGAKPTFFALRMRTKLRGKNTFSLCEVQK

YP_009913619.1 ribosomal protein L2 [Luffa acutangula]5.1e-1385.11Show/hide
Query:  ETASLSFGNSFGFPRIEVVGAKPTFFALRMRTKLRGKNTFSLCEVQK
        ETASLSFG+SFGFPRI V GAKP FFA RMR KLRGKNTFSLCEV+K
Subjt:  ETASLSFGNSFGFPRIEVVGAKPTFFALRMRTKLRGKNTFSLCEVQK

TrEMBL top hitse value%identityAlignment
A0A7D5XZ32 Ribosomal protein L22.5e-1385.11Show/hide
Query:  ETASLSFGNSFGFPRIEVVGAKPTFFALRMRTKLRGKNTFSLCEVQK
        ETASLSFG+SFGFPRI V GAKP FFA RMR KLRGKNTFSLCEV+K
Subjt:  ETASLSFGNSFGFPRIEVVGAKPTFFALRMRTKLRGKNTFSLCEVQK

A5BK62 Ribosomal_L2 domain-containing protein5.5e-1382.98Show/hide
Query:  ETASLSFGNSFGFPRIEVVGAKPTFFALRMRTKLRGKNTFSLCEVQK
        ET+SLSFG+SFGFPRI V GAKP FFA RMR KLRGKNTFSLCEV+K
Subjt:  ETASLSFGNSFGFPRIEVVGAKPTFFALRMRTKLRGKNTFSLCEVQK

B6VJV4 Ribosomal protein L25.5e-1382.98Show/hide
Query:  ETASLSFGNSFGFPRIEVVGAKPTFFALRMRTKLRGKNTFSLCEVQK
        ET+SLSFG+SFGFPRI V GAKP FFA RMR KLRGKNTFSLCEV+K
Subjt:  ETASLSFGNSFGFPRIEVVGAKPTFFALRMRTKLRGKNTFSLCEVQK

D5I399 Ribosomal protein L23.2e-1382.98Show/hide
Query:  ETASLSFGNSFGFPRIEVVGAKPTFFALRMRTKLRGKNTFSLCEVQK
        ETASLSFG+SFGFPR+ V GAKP FFA RMR KLRGKNTFSLCEV+K
Subjt:  ETASLSFGNSFGFPRIEVVGAKPTFFALRMRTKLRGKNTFSLCEVQK

Q5MF17 Ribosomal protein L2 (Fragment)5.5e-1382.98Show/hide
Query:  ETASLSFGNSFGFPRIEVVGAKPTFFALRMRTKLRGKNTFSLCEVQK
        ETASLSFG+SFGFPRI V GAKP FFA RMR K+RGKNTFSLCEV+K
Subjt:  ETASLSFGNSFGFPRIEVVGAKPTFFALRMRTKLRGKNTFSLCEVQK

SwissProt top hitse value%identityAlignment
P0C8K6 60S ribosomal protein L2, mitochondrial9.0e-1374.47Show/hide
Query:  ETASLSFGNSFGFPRIEVVGAKPTFFALRMRTKLRGKNTFSLCEVQK
        ETASLSFG+S GFPRI V GAKP FFA RMR K  GK TFSLCE++K
Subjt:  ETASLSFGNSFGFPRIEVVGAKPTFFALRMRTKLRGKNTFSLCEVQK

P92812 60S ribosomal protein L2, mitochondrial9.0e-1374.47Show/hide
Query:  ETASLSFGNSFGFPRIEVVGAKPTFFALRMRTKLRGKNTFSLCEVQK
        ETASLSFG+S GFPRI V GAKP FFA RMR K  GK TFSLCE++K
Subjt:  ETASLSFGNSFGFPRIEVVGAKPTFFALRMRTKLRGKNTFSLCEVQK

P93311 60S ribosomal protein L2, mitochondrial2.1e-1478.72Show/hide
Query:  ETASLSFGNSFGFPRIEVVGAKPTFFALRMRTKLRGKNTFSLCEVQK
        ETASL+F +SFGFPRI V GAKP FFA RMR K+RGK+TFSLCEVQK
Subjt:  ETASLSFGNSFGFPRIEVVGAKPTFFALRMRTKLRGKNTFSLCEVQK

Q2F969 60S ribosomal protein L2, mitochondrial9.0e-1374.47Show/hide
Query:  ETASLSFGNSFGFPRIEVVGAKPTFFALRMRTKLRGKNTFSLCEVQK
        ETASLSFG+S GFPRI V GAKP FFA RMR K  GK TFSLCE++K
Subjt:  ETASLSFGNSFGFPRIEVVGAKPTFFALRMRTKLRGKNTFSLCEVQK

Arabidopsis top hitse value%identityAlignment
AT2G07715.1 Nucleic acid-binding, OB-fold-like protein1.5e-1578.72Show/hide
Query:  ETASLSFGNSFGFPRIEVVGAKPTFFALRMRTKLRGKNTFSLCEVQK
        ETASL+F +SFGFPRI V GAKP FFA RMR K+RGK+TFSLCEVQK
Subjt:  ETASLSFGNSFGFPRIEVVGAKPTFFALRMRTKLRGKNTFSLCEVQK

ATMG00560.1 Nucleic acid-binding, OB-fold-like protein1.5e-1578.72Show/hide
Query:  ETASLSFGNSFGFPRIEVVGAKPTFFALRMRTKLRGKNTFSLCEVQK
        ETASL+F +SFGFPRI V GAKP FFA RMR K+RGK+TFSLCEVQK
Subjt:  ETASLSFGNSFGFPRIEVVGAKPTFFALRMRTKLRGKNTFSLCEVQK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAGACTGCATCACTTTCCTTTGGTAACTCTTTTGGTTTCCCAAGGATAGAGGTAGTTGGGGCAAAGCCCACTTTCTTCGCTCTGCGAATGAGAACTAAACTCAGAGGAAA
AAACACATTCTCTCTTTGCGAGGTCCAAAAA
mRNA sequenceShow/hide mRNA sequence
GAGACTGCATCACTTTCCTTTGGTAACTCTTTTGGTTTCCCAAGGATAGAGGTAGTTGGGGCAAAGCCCACTTTCTTCGCTCTGCGAATGAGAACTAAACTCAGAGGAAA
AAACACATTCTCTCTTTGCGAGGTCCAAAAA
Protein sequenceShow/hide protein sequence
ETASLSFGNSFGFPRIEVVGAKPTFFALRMRTKLRGKNTFSLCEVQK