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MS015185 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015185
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionE3 ubiquitin-protein ligase
Genome locationscaffold2:1675420..1675620
RNA-Seq ExpressionMS015185
SyntenyMS015185
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574079.1 E3 ubiquitin-protein ligase MPSR1, partial [Cucurbita argyrosperma subsp. sororia]3.2e-2167.16Show/hide
Query:  PPASESSIKAMPTAHMNQQIECVICLEEMEVGGLIKQMPCNHKFHSNCIGKWLELRDTFPVCRYQMP
        PPAS++SI AMP+ H+++Q +CVICL+E+EVGGL K+MPCNHKFH +CI KWLEL  + PVCRY+MP
Subjt:  PPASESSIKAMPTAHMNQQIECVICLEEMEVGGLIKQMPCNHKFHSNCIGKWLELRDTFPVCRYQMP

KAG7013138.1 E3 ubiquitin-protein ligase RING1-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]3.2e-2167.16Show/hide
Query:  PPASESSIKAMPTAHMNQQIECVICLEEMEVGGLIKQMPCNHKFHSNCIGKWLELRDTFPVCRYQMP
        PPAS++SI AMP+ H+++Q +CVICL+E+EVGGL K+MPCNHKFH +CI KWLEL  + PVCRY+MP
Subjt:  PPASESSIKAMPTAHMNQQIECVICLEEMEVGGLIKQMPCNHKFHSNCIGKWLELRDTFPVCRYQMP

XP_008446365.1 PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis melo]5.5e-2170.15Show/hide
Query:  PPASESSIKAMPTAHMNQQIECVICLEEMEVGGLIKQMPCNHKFHSNCIGKWLELRDTFPVCRYQMP
        PPAS++SIKAMP+  +++  ECVICL+E+EVGGL KQMPCNHKFH  CI KWLEL  + PVCRYQMP
Subjt:  PPASESSIKAMPTAHMNQQIECVICLEEMEVGGLIKQMPCNHKFHSNCIGKWLELRDTFPVCRYQMP

XP_022945451.1 E3 ubiquitin-protein ligase RING1-like [Cucurbita moschata]3.2e-2167.16Show/hide
Query:  PPASESSIKAMPTAHMNQQIECVICLEEMEVGGLIKQMPCNHKFHSNCIGKWLELRDTFPVCRYQMP
        PPAS++SI AMP+ H+++Q +CVICL+E+EVGGL K+MPCNHKFH +CI KWLEL  + PVCRY+MP
Subjt:  PPASESSIKAMPTAHMNQQIECVICLEEMEVGGLIKQMPCNHKFHSNCIGKWLELRDTFPVCRYQMP

XP_038891708.1 E3 ubiquitin-protein ligase MPSR1-like [Benincasa hispida]1.9e-2171.64Show/hide
Query:  PPASESSIKAMPTAHMNQQIECVICLEEMEVGGLIKQMPCNHKFHSNCIGKWLELRDTFPVCRYQMP
        PPAS++SIKAMP+  +++  ECVICLEE+EVGGL KQMPCNHKFH +CI KWLEL  + PVCRYQMP
Subjt:  PPASESSIKAMPTAHMNQQIECVICLEEMEVGGLIKQMPCNHKFHSNCIGKWLELRDTFPVCRYQMP

TrEMBL top hitse value%identityAlignment
A0A0A0KU18 RING-type domain-containing protein1.7e-2068.66Show/hide
Query:  PPASESSIKAMPTAHMNQQIECVICLEEMEVGGLIKQMPCNHKFHSNCIGKWLELRDTFPVCRYQMP
        PPAS++SIKAMP+  +++  ECVICL+E+EVG L KQMPCNHKFH +CI KWLEL  + PVCRYQMP
Subjt:  PPASESSIKAMPTAHMNQQIECVICLEEMEVGGLIKQMPCNHKFHSNCIGKWLELRDTFPVCRYQMP

A0A1S3BFQ2 E3 ubiquitin-protein ligase RING1-like2.7e-2170.15Show/hide
Query:  PPASESSIKAMPTAHMNQQIECVICLEEMEVGGLIKQMPCNHKFHSNCIGKWLELRDTFPVCRYQMP
        PPAS++SIKAMP+  +++  ECVICL+E+EVGGL KQMPCNHKFH  CI KWLEL  + PVCRYQMP
Subjt:  PPASESSIKAMPTAHMNQQIECVICLEEMEVGGLIKQMPCNHKFHSNCIGKWLELRDTFPVCRYQMP

A0A5D3D3N1 E3 ubiquitin-protein ligase RING1-like2.7e-2170.15Show/hide
Query:  PPASESSIKAMPTAHMNQQIECVICLEEMEVGGLIKQMPCNHKFHSNCIGKWLELRDTFPVCRYQMP
        PPAS++SIKAMP+  +++  ECVICL+E+EVGGL KQMPCNHKFH  CI KWLEL  + PVCRYQMP
Subjt:  PPASESSIKAMPTAHMNQQIECVICLEEMEVGGLIKQMPCNHKFHSNCIGKWLELRDTFPVCRYQMP

A0A6J1G0W4 E3 ubiquitin-protein ligase RING1-like1.6e-2167.16Show/hide
Query:  PPASESSIKAMPTAHMNQQIECVICLEEMEVGGLIKQMPCNHKFHSNCIGKWLELRDTFPVCRYQMP
        PPAS++SI AMP+ H+++Q +CVICL+E+EVGGL K+MPCNHKFH +CI KWLEL  + PVCRY+MP
Subjt:  PPASESSIKAMPTAHMNQQIECVICLEEMEVGGLIKQMPCNHKFHSNCIGKWLELRDTFPVCRYQMP

A0A6J1HTX2 E3 ubiquitin-protein ligase RING1-like3.5e-2167.16Show/hide
Query:  PPASESSIKAMPTAHMNQQIECVICLEEMEVGGLIKQMPCNHKFHSNCIGKWLELRDTFPVCRYQMP
        PPAS++SI AMP+ H++ Q ECVICL+E+EVGG+ K+MPCNHKFH +CI KWLEL  + PVCRY+MP
Subjt:  PPASESSIKAMPTAHMNQQIECVICLEEMEVGGLIKQMPCNHKFHSNCIGKWLELRDTFPVCRYQMP

SwissProt top hitse value%identityAlignment
Q6AVN2 E3 ubiquitin-protein ligase SIRP15.9e-1849.25Show/hide
Query:  PPASESSIKAMPTAHMNQQIECVICLEEMEVGGLIKQMPCNHKFHSNCIGKWLELRDTFPVCRYQMP
        PPA + +++A+PT  + + + C +CL+++EVG   KQMPC HKFHS+CI  WLEL  + PVCR+++P
Subjt:  PPASESSIKAMPTAHMNQQIECVICLEEMEVGGLIKQMPCNHKFHSNCIGKWLELRDTFPVCRYQMP

Q6DIP3 E3 ubiquitin-protein ligase RNF1261.5e-1347.06Show/hide
Query:  PPASESSIKAMPT-----AHMNQQIECVICLEEMEVGGLIKQMPCNHKFHSNCIGKWLELRDTFPVCR
        PPA    I+A+PT      H+   +EC +C E+  VG  ++Q+PCNH FH++CI  WLE  DT PVCR
Subjt:  PPASESSIKAMPT-----AHMNQQIECVICLEEMEVGGLIKQMPCNHKFHSNCIGKWLELRDTFPVCR

Q7T0Q3 E3 ubiquitin-protein ligase RNF126-A8.9e-1447.06Show/hide
Query:  PPASESSIKAMPT-----AHMNQQIECVICLEEMEVGGLIKQMPCNHKFHSNCIGKWLELRDTFPVCR
        PPA    I+A+PT      H+   +EC +C E+  VG  ++Q+PCNH FH++CI  WLE  DT PVCR
Subjt:  PPASESSIKAMPT-----AHMNQQIECVICLEEMEVGGLIKQMPCNHKFHSNCIGKWLELRDTFPVCR

Q8LPN7 E3 ubiquitin-protein ligase RING1-like4.7e-1543.84Show/hide
Query:  PPASESSIKAMPTAHMNQQI------ECVICLEEMEVGGLIKQMPCNHKFHSNCIGKWLELRDTFPVCRYQMP
        PPAS+S+I A+PT  + + +      +C +C++E E G  +KQMPC H FH +C+  WLEL ++ PVCR+++P
Subjt:  PPASESSIKAMPTAHMNQQI------ECVICLEEMEVGGLIKQMPCNHKFHSNCIGKWLELRDTFPVCRYQMP

Q9LQX2 E3 ubiquitin-protein ligase MPSR11.6e-1552.94Show/hide
Query:  PPASESSIKAMPTAHMNQ-QIECVICLEEMEVGGLIKQMPCNHKFHSNCIGKWLELRDTFPVCRYQMP
        PPAS++SI AMP   ++  + ECVICLEE +    +K+MPC H+FH  CI KWL    + PVCRY+MP
Subjt:  PPASESSIKAMPTAHMNQ-QIECVICLEEMEVGGLIKQMPCNHKFHSNCIGKWLELRDTFPVCRYQMP

Arabidopsis top hitse value%identityAlignment
AT1G26800.1 RING/U-box superfamily protein1.1e-1652.94Show/hide
Query:  PPASESSIKAMPTAHMNQ-QIECVICLEEMEVGGLIKQMPCNHKFHSNCIGKWLELRDTFPVCRYQMP
        PPAS++SI AMP   ++  + ECVICLEE +    +K+MPC H+FH  CI KWL    + PVCRY+MP
Subjt:  PPASESSIKAMPTAHMNQ-QIECVICLEEMEVGGLIKQMPCNHKFHSNCIGKWLELRDTFPVCRYQMP

AT1G55530.1 RING/U-box superfamily protein1.8e-1746.27Show/hide
Query:  PPASESSIKAMPTAHMNQQIECVICLEEMEVGGLIKQMPCNHKFHSNCIGKWLELRDTFPVCRYQMP
        PPA + +++A+ T  + + ++C +CL++ E+G   K MPC HKFHS+C+  WLEL  + PVCRYQ+P
Subjt:  PPASESSIKAMPTAHMNQQIECVICLEEMEVGGLIKQMPCNHKFHSNCIGKWLELRDTFPVCRYQMP

AT3G19950.1 RING/U-box superfamily protein3.3e-1643.84Show/hide
Query:  PPASESSIKAMPTAHMNQQI------ECVICLEEMEVGGLIKQMPCNHKFHSNCIGKWLELRDTFPVCRYQMP
        PPAS+S+I A+PT  + + +      +C +C++E E G  +KQMPC H FH +C+  WLEL ++ PVCR+++P
Subjt:  PPASESSIKAMPTAHMNQQI------ECVICLEEMEVGGLIKQMPCNHKFHSNCIGKWLELRDTFPVCRYQMP

AT4G26400.2 RING/U-box superfamily protein1.3e-1543.94Show/hide
Query:  PASESSIKAMPTAHMNQQIECVICLEEMEVGGLIKQMPCNHKFHSNCIGKWLELRDTFPVCRYQMP
        PA +  +  +PT  +++ ++C ICL++ + G   K+MPC HKFH  CI  WLEL  + PVCRY++P
Subjt:  PASESSIKAMPTAHMNQQIECVICLEEMEVGGLIKQMPCNHKFHSNCIGKWLELRDTFPVCRYQMP

AT5G56340.1 RING/U-box superfamily protein1.1e-1644.78Show/hide
Query:  PPASESSIKAMPTAHMNQQIECVICLEEMEVGGLIKQMPCNHKFHSNCIGKWLELRDTFPVCRYQMP
        PPA + +++A+PT  + + ++C +CL++ E G   K+MPC HKFH  CI  WLEL  + PVCR+++P
Subjt:  PPASESSIKAMPTAHMNQQIECVICLEEMEVGGLIKQMPCNHKFHSNCIGKWLELRDTFPVCRYQMP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CCCCCGGCTTCCGAATCATCGATCAAAGCCATGCCCACTGCTCACATGAATCAACAAATTGAATGTGTAATTTGTTTGGAGGAGATGGAAGTCGGTGGCCTGATCAAACA
AATGCCCTGCAACCATAAATTCCATTCCAATTGCATAGGGAAGTGGCTGGAGCTACGTGATACCTTCCCCGTTTGTAGATATCAGATGCCA
mRNA sequenceShow/hide mRNA sequence
CCCCCGGCTTCCGAATCATCGATCAAAGCCATGCCCACTGCTCACATGAATCAACAAATTGAATGTGTAATTTGTTTGGAGGAGATGGAAGTCGGTGGCCTGATCAAACA
AATGCCCTGCAACCATAAATTCCATTCCAATTGCATAGGGAAGTGGCTGGAGCTACGTGATACCTTCCCCGTTTGTAGATATCAGATGCCA
Protein sequenceShow/hide protein sequence
PPASESSIKAMPTAHMNQQIECVICLEEMEVGGLIKQMPCNHKFHSNCIGKWLELRDTFPVCRYQMP