; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS015189 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015189
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptiontranscription termination factor MTEF1, chloroplastic
Genome locationscaffold2:1699133..1700071
RNA-Seq ExpressionMS015189
SyntenyMS015189
Gene Ontology termsGO:0006353 - DNA-templated transcription, termination (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003690 - double-stranded DNA binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR003690 - Transcription termination factor, mitochondrial/chloroplastic
IPR038538 - MTERF superfamily, mitochondrial/chloroplastic


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013135.1 Transcription termination factor MTEF1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]7.0e-14384.35Show/hide
Query:  MISRLQFPPPCILLLFPRSSPPSLKPSGNPNFRSPRFTVTINTQFSGHSGTATSSDSGILFREKILYLENHLHVDSRKAFQQNPDSRSATLSAFKSVEVC
        MISR+Q  PP  L LFPRSS PSL P  NPNFR PRFT+++N+QFS H      SD+G+LFR+KILYLENHLHVD RKAF++NPDSRSATLSA KSVEVC
Subjt:  MISRLQFPPPCILLLFPRSSPPSLKPSGNPNFRSPRFTVTINTQFSGHSGTATSSDSGILFREKILYLENHLHVDSRKAFQQNPDSRSATLSAFKSVEVC

Query:  LSSMGLELSAVGRVLDMYPQLLTSDPEYDLYPIFDFLLNEVRIPFPDIRKSIIRCPRILVSDLDLQLRPTLLFLRNLGFVGLNAITCQTTMLLVSSIEHT
        LSSMGLELSAVGRVLDMYPQLLTSDP+YDLYPIFDFLLNEV+IPFPDIRKSI+RCPR+LVSDLDLQLRP L FLR+LGFVGLNAIT QTT+LLVSS+EHT
Subjt:  LSSMGLELSAVGRVLDMYPQLLTSDPEYDLYPIFDFLLNEVRIPFPDIRKSIIRCPRILVSDLDLQLRPTLLFLRNLGFVGLNAITCQTTMLLVSSIEHT

Query:  LLPKIKYLESLGFSHKDVVNMVLRSPGLLTYSIQNNLVPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSRMLKVSDGEFTAR
        LLPKI+YLE+LG SHKDVVNMVLRSP LLTYSIQNNLVPKVDYFLGDMKGDL EL+RFPQYFSFSLERKIKPRHRLLVEHGLSLSLS+MLKVSDGEFTAR
Subjt:  LLPKIKYLESLGFSHKDVVNMVLRSPGLLTYSIQNNLVPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSRMLKVSDGEFTAR

Query:  VIEMRLQSATADG
        ++EMRLQS+TADG
Subjt:  VIEMRLQSATADG

XP_022151208.1 transcription termination factor MTEF1, chloroplastic [Momordica charantia]1.8e-17099.68Show/hide
Query:  MISRLQFPPPCILLLFPRSSPPSLKPSGNPNFRSPRFTVTINTQFSGHSGTATSSDSGILFREKILYLENHLHVDSRKAFQQNPDSRSATLSAFKSVEVC
        MISRLQFPPPCILLLFPRSSPPSLKPSGNPNFRSPRFTVTINTQFSGHSGTATSSDSGILFREKILYLENHLHVDSRKAFQQNPDSRSATLSA KSVEVC
Subjt:  MISRLQFPPPCILLLFPRSSPPSLKPSGNPNFRSPRFTVTINTQFSGHSGTATSSDSGILFREKILYLENHLHVDSRKAFQQNPDSRSATLSAFKSVEVC

Query:  LSSMGLELSAVGRVLDMYPQLLTSDPEYDLYPIFDFLLNEVRIPFPDIRKSIIRCPRILVSDLDLQLRPTLLFLRNLGFVGLNAITCQTTMLLVSSIEHT
        LSSMGLELSAVGRVLDMYPQLLTSDPEYDLYPIFDFLLNEVRIPFPDIRKSIIRCPRILVSDLDLQLRPTLLFLRNLGFVGLNAITCQTTMLLVSSIEHT
Subjt:  LSSMGLELSAVGRVLDMYPQLLTSDPEYDLYPIFDFLLNEVRIPFPDIRKSIIRCPRILVSDLDLQLRPTLLFLRNLGFVGLNAITCQTTMLLVSSIEHT

Query:  LLPKIKYLESLGFSHKDVVNMVLRSPGLLTYSIQNNLVPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSRMLKVSDGEFTAR
        LLPKIKYLESLGFSHKDVVNMVLRSPGLLTYSIQNNLVPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSRMLKVSDGEFTAR
Subjt:  LLPKIKYLESLGFSHKDVVNMVLRSPGLLTYSIQNNLVPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSRMLKVSDGEFTAR

Query:  VIEMRLQSATADG
        VIEMRLQSATADG
Subjt:  VIEMRLQSATADG

XP_022945324.1 transcription termination factor MTEF1, chloroplastic [Cucurbita moschata]1.0e-14183.71Show/hide
Query:  MISRLQFPPPCILLLFPRSSPPSLKPSGNPNFRSPRFTVTINTQFSGHSGTATSSDSGILFREKILYLENHLHVDSRKAFQQNPDSRSATLSAFKSVEVC
        M+SR+Q  PP  L LFPRSS PSL P  NPNFR PRFT+++N+QFS H      SD+G+LFR+KILYLENHL+VD RKAF++NPDSRSATLSA KSVEVC
Subjt:  MISRLQFPPPCILLLFPRSSPPSLKPSGNPNFRSPRFTVTINTQFSGHSGTATSSDSGILFREKILYLENHLHVDSRKAFQQNPDSRSATLSAFKSVEVC

Query:  LSSMGLELSAVGRVLDMYPQLLTSDPEYDLYPIFDFLLNEVRIPFPDIRKSIIRCPRILVSDLDLQLRPTLLFLRNLGFVGLNAITCQTTMLLVSSIEHT
        LSSMGLELSAVGRVLDMYPQLLTSDP+YDLYPIFDFLLNEV+IPFPDIRKSI+RCPR+LVSDLDLQLRP L FLR+LGFVGLNAIT QTT+LLVSS+EHT
Subjt:  LSSMGLELSAVGRVLDMYPQLLTSDPEYDLYPIFDFLLNEVRIPFPDIRKSIIRCPRILVSDLDLQLRPTLLFLRNLGFVGLNAITCQTTMLLVSSIEHT

Query:  LLPKIKYLESLGFSHKDVVNMVLRSPGLLTYSIQNNLVPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSRMLKVSDGEFTAR
        LLPKI+YLE+LG SHKDVVNMVLRSP LLTYSIQNNLVPKVDYFLGDMKGDL EL+RFPQYFSFSLERKIKPRHRLLVEHGLSLSLS+MLKVSDGEFTAR
Subjt:  LLPKIKYLESLGFSHKDVVNMVLRSPGLLTYSIQNNLVPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSRMLKVSDGEFTAR

Query:  VIEMRLQSATADG
        ++EMRLQS+TADG
Subjt:  VIEMRLQSATADG

XP_022968085.1 transcription termination factor MTEF1, chloroplastic [Cucurbita maxima]9.2e-14384.03Show/hide
Query:  MISRLQFPPPCILLLFPRSSPPSLKPSGNPNFRSPRFTVTINTQFSGHSGTATSSDSGILFREKILYLENHLHVDSRKAFQQNPDSRSATLSAFKSVEVC
        MISR+Q  PPC   LFPRSS PSL P  NPNFR PRFT+++N+QFS H      SD+G+ FR+KILYLENHLHVD RKAF++NPDSRSATLSA KSVEVC
Subjt:  MISRLQFPPPCILLLFPRSSPPSLKPSGNPNFRSPRFTVTINTQFSGHSGTATSSDSGILFREKILYLENHLHVDSRKAFQQNPDSRSATLSAFKSVEVC

Query:  LSSMGLELSAVGRVLDMYPQLLTSDPEYDLYPIFDFLLNEVRIPFPDIRKSIIRCPRILVSDLDLQLRPTLLFLRNLGFVGLNAITCQTTMLLVSSIEHT
        LSSMGLELSAVGRVLDMYPQLLTSDP+YDLYPIFDFLLNEV+IPFPDIRKSI+RCPR+LVSDLDLQLRP L FLR+LGFVGLNAIT QTT+LLVSS+EHT
Subjt:  LSSMGLELSAVGRVLDMYPQLLTSDPEYDLYPIFDFLLNEVRIPFPDIRKSIIRCPRILVSDLDLQLRPTLLFLRNLGFVGLNAITCQTTMLLVSSIEHT

Query:  LLPKIKYLESLGFSHKDVVNMVLRSPGLLTYSIQNNLVPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSRMLKVSDGEFTAR
        LLPKI+YLE+LG SHKDVVNMVLRSP LLTYSIQNNLVPKVDYFLGDMKGDL EL+RFPQYFSFSLERKIKPRHRLLVEHGLSLSLS+MLKVSDGEFTAR
Subjt:  LLPKIKYLESLGFSHKDVVNMVLRSPGLLTYSIQNNLVPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSRMLKVSDGEFTAR

Query:  VIEMRLQSATADG
        ++EMRLQS+TADG
Subjt:  VIEMRLQSATADG

XP_023542512.1 transcription termination factor MTEF1, chloroplastic [Cucurbita pepo subsp. pepo]2.0e-14284.35Show/hide
Query:  MISRLQFPPPCILLLFPRSSPPSLKPSGNPNFRSPRFTVTINTQFSGHSGTATSSDSGILFREKILYLENHLHVDSRKAFQQNPDSRSATLSAFKSVEVC
        MISR+Q  PP  L LFPRSS PSLK   NPNFR PRFT+++N+QFS H      SD+G+LFR+KILYLENHLHVD RKAF++NPDSRSATLSA KSVEVC
Subjt:  MISRLQFPPPCILLLFPRSSPPSLKPSGNPNFRSPRFTVTINTQFSGHSGTATSSDSGILFREKILYLENHLHVDSRKAFQQNPDSRSATLSAFKSVEVC

Query:  LSSMGLELSAVGRVLDMYPQLLTSDPEYDLYPIFDFLLNEVRIPFPDIRKSIIRCPRILVSDLDLQLRPTLLFLRNLGFVGLNAITCQTTMLLVSSIEHT
        LSSMGLELSAVGRVLDMYPQLLTSDP+YDLYPIFDFLLNEV+IPFPDIRKSI+RCPR+LVSDLDLQLRP L FLR+LGFVGLNAIT QTT+LLVSS+EHT
Subjt:  LSSMGLELSAVGRVLDMYPQLLTSDPEYDLYPIFDFLLNEVRIPFPDIRKSIIRCPRILVSDLDLQLRPTLLFLRNLGFVGLNAITCQTTMLLVSSIEHT

Query:  LLPKIKYLESLGFSHKDVVNMVLRSPGLLTYSIQNNLVPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSRMLKVSDGEFTAR
        LLPKI+YLE+LG SHKDVVNMVLRSP LLTYSIQNNLVPKVDYFLGDMKGDL EL+RFPQYFSFSLERKIKPRHRLLVEHGLSLSLS+MLKVSDGEFTAR
Subjt:  LLPKIKYLESLGFSHKDVVNMVLRSPGLLTYSIQNNLVPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSRMLKVSDGEFTAR

Query:  VIEMRLQSATADG
        ++EMRLQS+TADG
Subjt:  VIEMRLQSATADG

TrEMBL top hitse value%identityAlignment
A0A1S3BFK9 transcription termination factor MTEF1, chloroplastic2.1e-12977.96Show/hide
Query:  MISRLQFPPP-CILLLFPRSSPPSLKPSGNPNFRSPRFTVTINTQFSGHSGTATSSDSGILFREKILYLENHLHVDSRKAFQQNPDSRSATLSAFKSVEV
        MISRLQ PPP C +  FP S   SLKP  NP+F  PRFT+++NTQFS        SDSG+LFREKILYLENHL+VDSRKAF++NP  RSA+LS  KSVEV
Subjt:  MISRLQFPPP-CILLLFPRSSPPSLKPSGNPNFRSPRFTVTINTQFSGHSGTATSSDSGILFREKILYLENHLHVDSRKAFQQNPDSRSATLSAFKSVEV

Query:  CLSSMGLELSAVGRVLDMYPQLLTSDPEYDLYPIFDFLLNEVRIPFPDIRKSIIRCPRILVSDLDLQLRPTLLFLRNLGFVGLNAITCQTTMLLVSSIEH
        CLSSMGL+ SAVGRVLDMYP+LLTS+P+YD+YPIFDFLLNEV+IPFPDI KSIIRCPRILVSDLD QLRP L FLR+LGFVGL AITCQTT+LLVS++EH
Subjt:  CLSSMGLELSAVGRVLDMYPQLLTSDPEYDLYPIFDFLLNEVRIPFPDIRKSIIRCPRILVSDLDLQLRPTLLFLRNLGFVGLNAITCQTTMLLVSSIEH

Query:  TLLPKIKYLESLGFSHKDVVNMVLRSPGLLTYSIQNNLVPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSRMLKVSDGEFTA
        TLLPKI++LESLG SH+DVVNMVLRSPGLLTYSIQNNLVPKV+YFLGDMKGDLLELK FPQYFSF+LERKIKPRHR LVEHGLSL LS+MLKVSDGEF A
Subjt:  TLLPKIKYLESLGFSHKDVVNMVLRSPGLLTYSIQNNLVPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSRMLKVSDGEFTA

Query:  RVIEMRLQSATAD
         + EMR +S  AD
Subjt:  RVIEMRLQSATAD

A0A5D3D1U5 Transcription termination factor MTEF12.1e-12977.96Show/hide
Query:  MISRLQFPPP-CILLLFPRSSPPSLKPSGNPNFRSPRFTVTINTQFSGHSGTATSSDSGILFREKILYLENHLHVDSRKAFQQNPDSRSATLSAFKSVEV
        MISRLQ PPP C +  FP S   SLKP  NP+F  PRFT+++NTQFS        SDSG+LFREKILYLENHL+VDSRKAF++NP  RSA+LS  KSVEV
Subjt:  MISRLQFPPP-CILLLFPRSSPPSLKPSGNPNFRSPRFTVTINTQFSGHSGTATSSDSGILFREKILYLENHLHVDSRKAFQQNPDSRSATLSAFKSVEV

Query:  CLSSMGLELSAVGRVLDMYPQLLTSDPEYDLYPIFDFLLNEVRIPFPDIRKSIIRCPRILVSDLDLQLRPTLLFLRNLGFVGLNAITCQTTMLLVSSIEH
        CLSSMGL+ SAVGRVLDMYP+LLTS+P+YD+YPIFDFLLNEV+IPFPDI KSIIRCPRILVSDLD QLRP L FLR+LGFVGL AITCQTT+LLVS++EH
Subjt:  CLSSMGLELSAVGRVLDMYPQLLTSDPEYDLYPIFDFLLNEVRIPFPDIRKSIIRCPRILVSDLDLQLRPTLLFLRNLGFVGLNAITCQTTMLLVSSIEH

Query:  TLLPKIKYLESLGFSHKDVVNMVLRSPGLLTYSIQNNLVPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSRMLKVSDGEFTA
        TLLPKI++LESLG SH+DVVNMVLRSPGLLTYSIQNNLVPKV+YFLGDMKGDLLELK FPQYFSF+LERKIKPRHR LVEHGLSL LS+MLKVSDGEF A
Subjt:  TLLPKIKYLESLGFSHKDVVNMVLRSPGLLTYSIQNNLVPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSRMLKVSDGEFTA

Query:  RVIEMRLQSATAD
         + EMR +S  AD
Subjt:  RVIEMRLQSATAD

A0A6J1DAK3 transcription termination factor MTEF1, chloroplastic8.6e-17199.68Show/hide
Query:  MISRLQFPPPCILLLFPRSSPPSLKPSGNPNFRSPRFTVTINTQFSGHSGTATSSDSGILFREKILYLENHLHVDSRKAFQQNPDSRSATLSAFKSVEVC
        MISRLQFPPPCILLLFPRSSPPSLKPSGNPNFRSPRFTVTINTQFSGHSGTATSSDSGILFREKILYLENHLHVDSRKAFQQNPDSRSATLSA KSVEVC
Subjt:  MISRLQFPPPCILLLFPRSSPPSLKPSGNPNFRSPRFTVTINTQFSGHSGTATSSDSGILFREKILYLENHLHVDSRKAFQQNPDSRSATLSAFKSVEVC

Query:  LSSMGLELSAVGRVLDMYPQLLTSDPEYDLYPIFDFLLNEVRIPFPDIRKSIIRCPRILVSDLDLQLRPTLLFLRNLGFVGLNAITCQTTMLLVSSIEHT
        LSSMGLELSAVGRVLDMYPQLLTSDPEYDLYPIFDFLLNEVRIPFPDIRKSIIRCPRILVSDLDLQLRPTLLFLRNLGFVGLNAITCQTTMLLVSSIEHT
Subjt:  LSSMGLELSAVGRVLDMYPQLLTSDPEYDLYPIFDFLLNEVRIPFPDIRKSIIRCPRILVSDLDLQLRPTLLFLRNLGFVGLNAITCQTTMLLVSSIEHT

Query:  LLPKIKYLESLGFSHKDVVNMVLRSPGLLTYSIQNNLVPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSRMLKVSDGEFTAR
        LLPKIKYLESLGFSHKDVVNMVLRSPGLLTYSIQNNLVPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSRMLKVSDGEFTAR
Subjt:  LLPKIKYLESLGFSHKDVVNMVLRSPGLLTYSIQNNLVPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSRMLKVSDGEFTAR

Query:  VIEMRLQSATADG
        VIEMRLQSATADG
Subjt:  VIEMRLQSATADG

A0A6J1G0M2 transcription termination factor MTEF1, chloroplastic4.9e-14283.71Show/hide
Query:  MISRLQFPPPCILLLFPRSSPPSLKPSGNPNFRSPRFTVTINTQFSGHSGTATSSDSGILFREKILYLENHLHVDSRKAFQQNPDSRSATLSAFKSVEVC
        M+SR+Q  PP  L LFPRSS PSL P  NPNFR PRFT+++N+QFS H      SD+G+LFR+KILYLENHL+VD RKAF++NPDSRSATLSA KSVEVC
Subjt:  MISRLQFPPPCILLLFPRSSPPSLKPSGNPNFRSPRFTVTINTQFSGHSGTATSSDSGILFREKILYLENHLHVDSRKAFQQNPDSRSATLSAFKSVEVC

Query:  LSSMGLELSAVGRVLDMYPQLLTSDPEYDLYPIFDFLLNEVRIPFPDIRKSIIRCPRILVSDLDLQLRPTLLFLRNLGFVGLNAITCQTTMLLVSSIEHT
        LSSMGLELSAVGRVLDMYPQLLTSDP+YDLYPIFDFLLNEV+IPFPDIRKSI+RCPR+LVSDLDLQLRP L FLR+LGFVGLNAIT QTT+LLVSS+EHT
Subjt:  LSSMGLELSAVGRVLDMYPQLLTSDPEYDLYPIFDFLLNEVRIPFPDIRKSIIRCPRILVSDLDLQLRPTLLFLRNLGFVGLNAITCQTTMLLVSSIEHT

Query:  LLPKIKYLESLGFSHKDVVNMVLRSPGLLTYSIQNNLVPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSRMLKVSDGEFTAR
        LLPKI+YLE+LG SHKDVVNMVLRSP LLTYSIQNNLVPKVDYFLGDMKGDL EL+RFPQYFSFSLERKIKPRHRLLVEHGLSLSLS+MLKVSDGEFTAR
Subjt:  LLPKIKYLESLGFSHKDVVNMVLRSPGLLTYSIQNNLVPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSRMLKVSDGEFTAR

Query:  VIEMRLQSATADG
        ++EMRLQS+TADG
Subjt:  VIEMRLQSATADG

A0A6J1HTW2 transcription termination factor MTEF1, chloroplastic4.4e-14384.03Show/hide
Query:  MISRLQFPPPCILLLFPRSSPPSLKPSGNPNFRSPRFTVTINTQFSGHSGTATSSDSGILFREKILYLENHLHVDSRKAFQQNPDSRSATLSAFKSVEVC
        MISR+Q  PPC   LFPRSS PSL P  NPNFR PRFT+++N+QFS H      SD+G+ FR+KILYLENHLHVD RKAF++NPDSRSATLSA KSVEVC
Subjt:  MISRLQFPPPCILLLFPRSSPPSLKPSGNPNFRSPRFTVTINTQFSGHSGTATSSDSGILFREKILYLENHLHVDSRKAFQQNPDSRSATLSAFKSVEVC

Query:  LSSMGLELSAVGRVLDMYPQLLTSDPEYDLYPIFDFLLNEVRIPFPDIRKSIIRCPRILVSDLDLQLRPTLLFLRNLGFVGLNAITCQTTMLLVSSIEHT
        LSSMGLELSAVGRVLDMYPQLLTSDP+YDLYPIFDFLLNEV+IPFPDIRKSI+RCPR+LVSDLDLQLRP L FLR+LGFVGLNAIT QTT+LLVSS+EHT
Subjt:  LSSMGLELSAVGRVLDMYPQLLTSDPEYDLYPIFDFLLNEVRIPFPDIRKSIIRCPRILVSDLDLQLRPTLLFLRNLGFVGLNAITCQTTMLLVSSIEHT

Query:  LLPKIKYLESLGFSHKDVVNMVLRSPGLLTYSIQNNLVPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSRMLKVSDGEFTAR
        LLPKI+YLE+LG SHKDVVNMVLRSP LLTYSIQNNLVPKVDYFLGDMKGDL EL+RFPQYFSFSLERKIKPRHRLLVEHGLSLSLS+MLKVSDGEFTAR
Subjt:  LLPKIKYLESLGFSHKDVVNMVLRSPGLLTYSIQNNLVPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSRMLKVSDGEFTAR

Query:  VIEMRLQSATADG
        ++EMRLQS+TADG
Subjt:  VIEMRLQSATADG

SwissProt top hitse value%identityAlignment
F4IHL3 Transcription termination factor MTERF2, chloroplastic4.3e-1833.33Show/hide
Query:  MGLELSAVGRVLDMYPQLLTSDPEYDLYPIFDFLLNEVRIPFPDIRKSIIRCPRILVSDLDLQLRPTLLFLRNLGFV---GLNAITCQTTMLLVSSIEHT
        +G+    + R+L + P L   D E  + P   F L E+ IP   I   +++ P +L + L  ++RP ++FL     V    +  +      LL  SI   
Subjt:  MGLELSAVGRVLDMYPQLLTSDPEYDLYPIFDFLLNEVRIPFPDIRKSIIRCPRILVSDLDLQLRPTLLFLRNLGFV---GLNAITCQTTMLLVSSIEHT

Query:  LLPKIKYLESLGFSHKDVVNMVLRSPGLLTYSIQNNLVPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSRMLKVSDGEFTAR
        L P ++Y  SLG     +  M+   P LL Y++ +NL PK  Y    M   L +L  FP++FS+SLER+I PRH ++VE+ ++  L  ML  +D EF  R
Subjt:  LLPKIKYLESLGFSHKDVVNMVLRSPGLLTYSIQNNLVPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSRMLKVSDGEFTAR

Query:  V
        V
Subjt:  V

F4JVI3 Transcription termination factor MTERF5, chloroplastic1.2e-1729.58Show/hide
Query:  LSSMGLELSAVGRVLDMYPQLLTSDPEYDLYPIFDFLLNEVRIPFPDIRKSIIRCPRILVSDLDLQLRPTLLFLRNLGF-VGLNAITCQTTMLLVSSIEH
        L ++G++ +   +++  +P +LT   +  L    +F L++  +    I + + RCP I+   ++ +LRPT+ + R+L   V +    C  T  L  SIE 
Subjt:  LSSMGLELSAVGRVLDMYPQLLTSDPEYDLYPIFDFLLNEVRIPFPDIRKSIIRCPRILVSDLDLQLRPTLLFLRNLGF-VGLNAITCQTTMLLVSSIEH

Query:  TLLPKIKYLESLGFSHKDVVNMVLRSPGLLTYSIQNNLVPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSRMLKVSDGEFTA
         L P  ++    GF   ++  M+ R   L T+S++ N++PK DYF   M     EL +FPQ+F +SL+ +IKPR+ L+   G+ L L+++L +S  EF  
Subjt:  TLLPKIKYLESLGFSHKDVVNMVLRSPGLLTYSIQNNLVPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSRMLKVSDGEFTA

Query:  RVIEMRLQSATAD
        +V++ ++    ++
Subjt:  RVIEMRLQSATAD

Q84X53 Transcription termination factor MTEF1, chloroplastic5.0e-8358.42Show/hide
Query:  FRSPRFTVTINTQFSGHSGTATSSDSGILFREKILYLENHLHVDSRKAFQQNPDSRSATLSAFKSVEVCLSSMGLELSAVGRVLDMYPQLLTSDPEYDLY
        F  P F+      F+G      +SD+GILFREK++YL++ L+VD  KA + NP  RSA +S+  SVE  LSS GL   AVGR+LDM+P LLTSDPE ++ 
Subjt:  FRSPRFTVTINTQFSGHSGTATSSDSGILFREKILYLENHLHVDSRKAFQQNPDSRSATLSAFKSVEVCLSSMGLELSAVGRVLDMYPQLLTSDPEYDLY

Query:  PIFDFLLNEVRIPFPDIRKSIIRCPRILVSDLDLQLRPTLLFLRNLGFVGLNAITCQTTMLLVSSIEHTLLPKIKYL-ESLGFSHKDVVNMVLRSPGLLT
        P+  FL NE+ I   DI KSI RCPR+L+S +D QLRP L FL+ LGFVG + IT + T+LLVS++E TL+PKI+YL E LGF+ ++V  MV+RSP LLT
Subjt:  PIFDFLLNEVRIPFPDIRKSIIRCPRILVSDLDLQLRPTLLFLRNLGFVGLNAITCQTTMLLVSSIEHTLLPKIKYL-ESLGFSHKDVVNMVLRSPGLLT

Query:  YSIQNNLVPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSRMLKVSDGEFTARVIEMRLQSA
        YS+ NNLVPKV++F+ +M+GD+ ELKRFPQYFSFSLERKIKPRHRLL EHG+ + LS MLKVSDG+F   ++E+RL+SA
Subjt:  YSIQNNLVPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSRMLKVSDGEFTARVIEMRLQSA

Q9FM80 Transcription termination factor MTERF9, chloroplastic6.6e-1929.38Show/hide
Query:  HVDSRKAFQQNPDSRSATL-SAFKSVEVCLSSMGLELSAVGRVLDMYPQLLTSDPEYDLYPIFDFLLNEVRIPFPDIRKSIIRCPRILVSDLDLQLRPTL
        H D ++   + P     T+ +  K+    L  +G+  S +G+++   P L +   E  L P   +L+ EV I   D+ K +   P+ILV  LD+      
Subjt:  HVDSRKAFQQNPDSRSATL-SAFKSVEVCLSSMGLELSAVGRVLDMYPQLLTSDPEYDLYPIFDFLLNEVRIPFPDIRKSIIRCPRILVSDLDLQLRPTL

Query:  LFL-RNLGFVGLNAITC--QTTMLLVSSIEHTLLPKIKYLESLGFSHKDVVNMVLRSPGLLTYSIQNNLVPKVDYFLGDMKGDLLELKRFPQYFSFSLER
        +FL + LG    + +    +   LL  SI+   LP+I +L S+G  + D++ ++     +L+ S+++NL PK  Y + ++  ++  L ++P Y S SL++
Subjt:  LFL-RNLGFVGLNAITC--QTTMLLVSSIEHTLLPKIKYLESLGFSHKDVVNMVLRSPGLLTYSIQNNLVPKVDYFLGDMKGDLLELKRFPQYFSFSLER

Query:  KIKPRHRLLVE
        +I+PRHR LVE
Subjt:  KIKPRHRLLVE

Q9ZT96 Transcription termination factor MTERF4, chloroplastic2.5e-1027.88Show/hide
Query:  LSSMGLELSAVGRVLDMYPQLLTSDPEYDLYP----IFDFLLNEVRIPFPDIRKSIIRCPRILVSDLDLQL---RPTLLFLRNLGFVGLNAITCQTTMLL
        L  +G+   A  R+++  P +L  + +  + P    + DF + E  +P       I + P I+  DL  +L   R  L    +L    L ++  +     
Subjt:  LSSMGLELSAVGRVLDMYPQLLTSDPEYDLYP----IFDFLLNEVRIPFPDIRKSIIRCPRILVSDLDLQL---RPTLLFLRNLGFVGLNAITCQTTMLL

Query:  VSSIEHTLLPKIKYLESLGFSHKDVVNMVLRSPGLLTYSIQNNLVPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSRMLKVS
        VS  E  +L  I +L   GFS      MV+  P +L  ++   +    +YF  +MK  L +L  FP +F++ LE  +KPRH+ +++ G+  SL+ ML  S
Subjt:  VSSIEHTLLPKIKYLESLGFSHKDVVNMVLRSPGLLTYSIQNNLVPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSRMLKVS

Query:  DGEFTARV
        D +F  R+
Subjt:  DGEFTARV

Arabidopsis top hitse value%identityAlignment
AT2G03050.1 Mitochondrial transcription termination factor family protein3.5e-8458.42Show/hide
Query:  FRSPRFTVTINTQFSGHSGTATSSDSGILFREKILYLENHLHVDSRKAFQQNPDSRSATLSAFKSVEVCLSSMGLELSAVGRVLDMYPQLLTSDPEYDLY
        F  P F+      F+G      +SD+GILFREK++YL++ L+VD  KA + NP  RSA +S+  SVE  LSS GL   AVGR+LDM+P LLTSDPE ++ 
Subjt:  FRSPRFTVTINTQFSGHSGTATSSDSGILFREKILYLENHLHVDSRKAFQQNPDSRSATLSAFKSVEVCLSSMGLELSAVGRVLDMYPQLLTSDPEYDLY

Query:  PIFDFLLNEVRIPFPDIRKSIIRCPRILVSDLDLQLRPTLLFLRNLGFVGLNAITCQTTMLLVSSIEHTLLPKIKYL-ESLGFSHKDVVNMVLRSPGLLT
        P+  FL NE+ I   DI KSI RCPR+L+S +D QLRP L FL+ LGFVG + IT + T+LLVS++E TL+PKI+YL E LGF+ ++V  MV+RSP LLT
Subjt:  PIFDFLLNEVRIPFPDIRKSIIRCPRILVSDLDLQLRPTLLFLRNLGFVGLNAITCQTTMLLVSSIEHTLLPKIKYL-ESLGFSHKDVVNMVLRSPGLLT

Query:  YSIQNNLVPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSRMLKVSDGEFTARVIEMRLQSA
        YS+ NNLVPKV++F+ +M+GD+ ELKRFPQYFSFSLERKIKPRHRLL EHG+ + LS MLKVSDG+F   ++E+RL+SA
Subjt:  YSIQNNLVPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSRMLKVSDGEFTARVIEMRLQSA

AT2G34620.1 Mitochondrial transcription termination factor family protein1.1e-5844.72Show/hide
Query:  LFPRSSPPSLKPSGNPNFRSPRFTVTINTQFSGHS-GTATSSDSGILFREKILYLENHLHVDSRKAFQQNPDSRSATLSAFKSVEVCLSSMGLELSAVGR
        L+     PS        F S + T TI T    H   T       +  +EKIL LE  + +DS KA   NP   SA L + +SV   L S G+  + + R
Subjt:  LFPRSSPPSLKPSGNPNFRSPRFTVTINTQFSGHS-GTATSSDSGILFREKILYLENHLHVDSRKAFQQNPDSRSATLSAFKSVEVCLSSMGLELSAVGR

Query:  VLDMYPQLLTSDPEYDLYPIFDFLLNEVRIPFPDIRKSIIRCPRILVSDLDLQLRPTLLFLRNLGFVGLNAITCQTTMLLVSSIEHTLLPKIKYLESLGF
        +L M P++LTSD   +LYP+F FL N++ +P    R+ I +CPR+L+S ++ QL+P L +L+ LG   L A+  Q  +LLVSS+EHTL+PK+++LES+GF
Subjt:  VLDMYPQLLTSDPEYDLYPIFDFLLNEVRIPFPDIRKSIIRCPRILVSDLDLQLRPTLLFLRNLGFVGLNAITCQTTMLLVSSIEHTLLPKIKYLESLGF

Query:  SHKDVVNMVLRSPGLLTYSIQNNLVPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSRMLKVSDGEF
        S  + + M+LR P L T+SI+NN  PK+DYF+ ++KG L  LK FPQYF+FSLE++IKPRH   +E GL L LS MLK +D EF
Subjt:  SHKDVVNMVLRSPGLLTYSIQNNLVPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSRMLKVSDGEF

AT2G36000.1 Mitochondrial transcription termination factor family protein6.1e-3635.79Show/hide
Query:  ISRLQFPPPCILLLFPRSSPPSLKPSGNPNFRSPRFTVTINTQFSGHSGTATSSDSGILFREKILYLENHLHVDSRKAFQQNPDSRSATLSAFKSVEVCL
        +SRL+F     L   P +S  S     +P+  S   T T  T       T  + +S I   EK++YL++ L +D      ++P   S  LSA +SV   +
Subjt:  ISRLQFPPPCILLLFPRSSPPSLKPSGNPNFRSPRFTVTINTQFSGHSGTATSSDSGILFREKILYLENHLHVDSRKAFQQNPDSRSATLSAFKSVEVCL

Query:  SS--MGLELSAVGRVLDMYPQLLTSDPEYDLYPIFDFLLNEVRI-PFPDIRKSIIRCPRILVSDLDLQLRPTLLFLRNLGFVGLNAITCQTTMLLVSSIE
        ++  +   L    R++ M P+LLTS       P+  FLL EV +    D+R+++ R PR+L   +D QLRPTL FL+ +G +  +    + T LL  S++
Subjt:  SS--MGLELSAVGRVLDMYPQLLTSDPEYDLYPIFDFLLNEVRI-PFPDIRKSIIRCPRILVSDLDLQLRPTLLFLRNLGFVGLNAITCQTTMLLVSSIE

Query:  HTLLPKIKYLESLGFSHKDVVNMVLRSPGLLTYSIQNNLVPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSRMLKVSDGEF
        + L+P+I Y E LGFS +    M  R P L  YSI  N  PK+ Y + +M  D+ E+  FPQYFSFSLE +IKPRH      G+   L  MLK ++  F
Subjt:  HTLLPKIKYLESLGFSHKDVVNMVLRSPGLLTYSIQNNLVPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSRMLKVSDGEF

AT2G36000.2 Mitochondrial transcription termination factor family protein6.1e-3635.79Show/hide
Query:  ISRLQFPPPCILLLFPRSSPPSLKPSGNPNFRSPRFTVTINTQFSGHSGTATSSDSGILFREKILYLENHLHVDSRKAFQQNPDSRSATLSAFKSVEVCL
        +SRL+F     L   P +S  S     +P+  S   T T  T       T  + +S I   EK++YL++ L +D      ++P   S  LSA +SV   +
Subjt:  ISRLQFPPPCILLLFPRSSPPSLKPSGNPNFRSPRFTVTINTQFSGHSGTATSSDSGILFREKILYLENHLHVDSRKAFQQNPDSRSATLSAFKSVEVCL

Query:  SS--MGLELSAVGRVLDMYPQLLTSDPEYDLYPIFDFLLNEVRI-PFPDIRKSIIRCPRILVSDLDLQLRPTLLFLRNLGFVGLNAITCQTTMLLVSSIE
        ++  +   L    R++ M P+LLTS       P+  FLL EV +    D+R+++ R PR+L   +D QLRPTL FL+ +G +  +    + T LL  S++
Subjt:  SS--MGLELSAVGRVLDMYPQLLTSDPEYDLYPIFDFLLNEVRI-PFPDIRKSIIRCPRILVSDLDLQLRPTLLFLRNLGFVGLNAITCQTTMLLVSSIE

Query:  HTLLPKIKYLESLGFSHKDVVNMVLRSPGLLTYSIQNNLVPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSRMLKVSDGEF
        + L+P+I Y E LGFS +    M  R P L  YSI  N  PK+ Y + +M  D+ E+  FPQYFSFSLE +IKPRH      G+   L  MLK ++  F
Subjt:  HTLLPKIKYLESLGFSHKDVVNMVLRSPGLLTYSIQNNLVPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSRMLKVSDGEF

AT3G18870.1 Mitochondrial transcription termination factor family protein4.4e-3435.41Show/hide
Query:  SGTATSSDSGILFREKILYLENHLHVDSRKAFQQNP--DSRSATLSAFKSVEVCLSSMGLELSAVGRVLDMYPQLLTSDPEYD---LYPIFDFLLNEVRI
        S  + SS   +  + +  + EN  H+ S     QNP     +  LS   S    L S G+      R++ + PQL +  P +D   L P+FDFL  E+  
Subjt:  SGTATSSDSGILFREKILYLENHLHVDSRKAFQQNP--DSRSATLSAFKSVEVCLSSMGLELSAVGRVLDMYPQLLTSDPEYD---LYPIFDFLLNEVRI

Query:  PFPDIRKSIIRCPRILVSDLDLQLRPTLLFLRNLGFVGLNAITCQTTMLLVSSIEHTLLPKIKYLESLGFSHKDVVNMVLRSPGLLTYSIQNNLVPKVDY
           + R  I+ CP IL SD++  LRPTL++L+ LG   LN  +     +L + +E  L  K+++L+S+GF H++   +  R P +  YS+++NL PK ++
Subjt:  PFPDIRKSIIRCPRILVSDLDLQLRPTLLFLRNLGFVGLNAITCQTTMLLVSSIEHTLLPKIKYLESLGFSHKDVVNMVLRSPGLLTYSIQNNLVPKVDY

Query:  FLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSRMLKVSDGEFTAR
         + DM+ +L ELK+FPQYF+FSL ++I+PRH  L +  + +SLSRML   D +F ++
Subjt:  FLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSRMLKVSDGEFTAR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAAGCAGACTCCAATTTCCTCCTCCATGCATCCTCCTCCTCTTTCCTCGGTCATCGCCTCCATCTCTTAAACCCTCGGGAAACCCTAATTTCAGAAGCCCTCGTTT
CACCGTGACCATTAATACCCAATTTTCCGGCCATTCCGGCACCGCAACTTCCTCCGACTCCGGCATCCTATTCCGGGAGAAAATACTATACCTCGAGAATCACCTTCATG
TCGATTCCCGGAAAGCCTTCCAGCAGAATCCCGATTCTCGTTCCGCTACTCTCTCCGCTTTCAAGTCCGTCGAGGTCTGTCTCTCCTCCATGGGACTCGAGCTCTCTGCA
GTTGGCCGCGTCCTCGACATGTACCCTCAACTCCTCACCTCTGACCCGGAATACGATCTCTACCCCATCTTCGATTTCCTTCTTAATGAGGTCCGAATTCCGTTTCCCGA
CATTCGAAAATCCATAATTCGATGCCCTAGAATTCTCGTCTCTGATTTAGACCTTCAATTGCGACCTACGTTGCTTTTCTTGCGCAATTTGGGTTTCGTTGGATTGAATG
CCATCACGTGCCAGACGACAATGCTACTGGTTTCGAGTATTGAGCATACGCTTCTGCCCAAGATTAAGTACCTCGAGAGCTTGGGATTCTCGCACAAGGATGTGGTAAAT
ATGGTATTAAGGTCTCCGGGGTTGTTGACATATAGCATTCAAAACAATTTGGTACCGAAAGTGGATTATTTTTTAGGAGACATGAAGGGTGATTTACTGGAATTGAAAAG
GTTTCCGCAGTATTTTTCGTTTAGTTTGGAGAGAAAAATTAAGCCTCGTCATCGTTTACTGGTTGAGCATGGATTGTCGCTTTCTTTGTCGAGAATGCTGAAGGTTAGTG
ATGGGGAGTTCACTGCAAGGGTAATAGAAATGCGATTGCAGTCGGCTACGGCAGATGGT
mRNA sequenceShow/hide mRNA sequence
ATGATAAGCAGACTCCAATTTCCTCCTCCATGCATCCTCCTCCTCTTTCCTCGGTCATCGCCTCCATCTCTTAAACCCTCGGGAAACCCTAATTTCAGAAGCCCTCGTTT
CACCGTGACCATTAATACCCAATTTTCCGGCCATTCCGGCACCGCAACTTCCTCCGACTCCGGCATCCTATTCCGGGAGAAAATACTATACCTCGAGAATCACCTTCATG
TCGATTCCCGGAAAGCCTTCCAGCAGAATCCCGATTCTCGTTCCGCTACTCTCTCCGCTTTCAAGTCCGTCGAGGTCTGTCTCTCCTCCATGGGACTCGAGCTCTCTGCA
GTTGGCCGCGTCCTCGACATGTACCCTCAACTCCTCACCTCTGACCCGGAATACGATCTCTACCCCATCTTCGATTTCCTTCTTAATGAGGTCCGAATTCCGTTTCCCGA
CATTCGAAAATCCATAATTCGATGCCCTAGAATTCTCGTCTCTGATTTAGACCTTCAATTGCGACCTACGTTGCTTTTCTTGCGCAATTTGGGTTTCGTTGGATTGAATG
CCATCACGTGCCAGACGACAATGCTACTGGTTTCGAGTATTGAGCATACGCTTCTGCCCAAGATTAAGTACCTCGAGAGCTTGGGATTCTCGCACAAGGATGTGGTAAAT
ATGGTATTAAGGTCTCCGGGGTTGTTGACATATAGCATTCAAAACAATTTGGTACCGAAAGTGGATTATTTTTTAGGAGACATGAAGGGTGATTTACTGGAATTGAAAAG
GTTTCCGCAGTATTTTTCGTTTAGTTTGGAGAGAAAAATTAAGCCTCGTCATCGTTTACTGGTTGAGCATGGATTGTCGCTTTCTTTGTCGAGAATGCTGAAGGTTAGTG
ATGGGGAGTTCACTGCAAGGGTAATAGAAATGCGATTGCAGTCGGCTACGGCAGATGGT
Protein sequenceShow/hide protein sequence
MISRLQFPPPCILLLFPRSSPPSLKPSGNPNFRSPRFTVTINTQFSGHSGTATSSDSGILFREKILYLENHLHVDSRKAFQQNPDSRSATLSAFKSVEVCLSSMGLELSA
VGRVLDMYPQLLTSDPEYDLYPIFDFLLNEVRIPFPDIRKSIIRCPRILVSDLDLQLRPTLLFLRNLGFVGLNAITCQTTMLLVSSIEHTLLPKIKYLESLGFSHKDVVN
MVLRSPGLLTYSIQNNLVPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSRMLKVSDGEFTARVIEMRLQSATADG