CuGenDBv2

Gene ID	MS015199
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	RNA-binding protein
Genome location	scaffold2:1744301..1745825
RNA-Seq Expression	MS015199
Synteny	MS015199
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6601448.1 Galactoside 2-alpha-L-fucosyltransferase, partial [Cucurbita argyrosperma subsp. sororia]

3.9e-96

95.74

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Query:  MSFMKGDLLARTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTIKTISLPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVGEE
        MSFMKGDLL RTRKLVKGLAKAEP+WLKAMEQAPPPTFPR+DGTIKTI+LPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGV EE
Subjt:  MSFMKGDLLARTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTIKTISLPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVGEE

Query:  EAMAVANMEYRAEKKVKKKAYARLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGGGW
        EAMAVANMEYRAEKK KKKAY+RLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRG GW
Subjt:  EAMAVANMEYRAEKKVKKKAYARLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGGGW

KAG7032230.1 hypothetical protein SDJN02_06273 [Cucurbita argyrosperma subsp. argyrosperma]

1.1e-95

95.21

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Query:  MSFMKGDLLARTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTIKTISLPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVGEE
        MSFMKGDLL RTRKLVKGLAKAEP+WLKAMEQAPPPTFPR+DGTIKTI+LPEDVYV+KFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGV EE
Subjt:  MSFMKGDLLARTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTIKTISLPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVGEE

Query:  EAMAVANMEYRAEKKVKKKAYARLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGGGW
        EAMAVANMEYRAEKK KKKAY+RLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRG GW
Subjt:  EAMAVANMEYRAEKKVKKKAYARLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGGGW

XP_022151151.1 uncharacterized protein LOC111019147 [Momordica charantia]

2.2e-99

100

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Query:  MSFMKGDLLARTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTIKTISLPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVGEE
        MSFMKGDLLARTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTIKTISLPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVGEE
Subjt:  MSFMKGDLLARTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTIKTISLPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVGEE

Query:  EAMAVANMEYRAEKKVKKKAYARLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGGGW
        EAMAVANMEYRAEKKVKKKAYARLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGGGW
Subjt:  EAMAVANMEYRAEKKVKKKAYARLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGGGW

XP_022957544.1 uncharacterized protein LOC111458914 [Cucurbita moschata]

3.9e-96

95.74

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Query:  MSFMKGDLLARTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTIKTISLPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVGEE
        MSFMKGDLL RTRKLVKGLAKAEP+WLKAMEQAPPPTFPR+DGTIKTI+LPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGV EE
Subjt:  MSFMKGDLLARTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTIKTISLPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVGEE

Query:  EAMAVANMEYRAEKKVKKKAYARLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGGGW
        EAMAVANMEYRAEKK KKKAY+RLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRG GW
Subjt:  EAMAVANMEYRAEKKVKKKAYARLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGGGW

XP_022996766.1 uncharacterized protein LOC111491881 [Cucurbita maxima]

1.5e-95

94.68

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Query:  MSFMKGDLLARTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTIKTISLPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVGEE
        MSFMKGDLL+RTRKLVKGLAKAEP+WLKAMEQAPPPTFPR+DG +KTI+LPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGV EE
Subjt:  MSFMKGDLLARTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTIKTISLPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVGEE

Query:  EAMAVANMEYRAEKKVKKKAYARLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGGGW
        EAMAVANMEYRAEKK KKKAY+RLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRG GW
Subjt:  EAMAVANMEYRAEKKVKKKAYARLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGGGW

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KQQ3 Uncharacterized protein

8.7e-86

88.71

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Query:  MSFMKGDLLARTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTIKTISLPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVGEE
        MSFMKGDLL +TRKLVKGLAKAEPVWLKAMEQAPPP+FPRVDGTIKTI+LPEDVYVKKFF+KHPDS Y DAIKFC F+PPPARIF  RVLELKEQGV EE
Subjt:  MSFMKGDLLARTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTIKTISLPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVGEE

Query:  EAMAVANMEYRAEKKVKKKAYARLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGG
        EAM VANMEYRAEKK+KK AY+RLKQIARLQGKKPP NPYPSAIKEIQAEERKFVRDRFF+PKIKEIAQRLKEERAAEMQ+R  GG
Subjt:  EAMAVANMEYRAEKKVKKKAYARLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGG

A0A6J1DDQ7 uncharacterized protein LOC111019147

1.1e-99

100

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Query:  MSFMKGDLLARTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTIKTISLPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVGEE
        MSFMKGDLLARTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTIKTISLPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVGEE
Subjt:  MSFMKGDLLARTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTIKTISLPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVGEE

Query:  EAMAVANMEYRAEKKVKKKAYARLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGGGW
        EAMAVANMEYRAEKKVKKKAYARLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGGGW
Subjt:  EAMAVANMEYRAEKKVKKKAYARLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGGGW

A0A6J1GZF0 uncharacterized protein LOC111458914

1.9e-96

95.74

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Query:  MSFMKGDLLARTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTIKTISLPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVGEE
        MSFMKGDLL RTRKLVKGLAKAEP+WLKAMEQAPPPTFPR+DGTIKTI+LPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGV EE
Subjt:  MSFMKGDLLARTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTIKTISLPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVGEE

Query:  EAMAVANMEYRAEKKVKKKAYARLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGGGW
        EAMAVANMEYRAEKK KKKAY+RLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRG GW
Subjt:  EAMAVANMEYRAEKKVKKKAYARLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGGGW

A0A6J1KC52 uncharacterized protein LOC111491881

7.1e-96

94.68

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Query:  MSFMKGDLLARTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTIKTISLPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVGEE
        MSFMKGDLL+RTRKLVKGLAKAEP+WLKAMEQAPPPTFPR+DG +KTI+LPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGV EE
Subjt:  MSFMKGDLLARTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTIKTISLPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVGEE

Query:  EAMAVANMEYRAEKKVKKKAYARLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGGGW
        EAMAVANMEYRAEKK KKKAY+RLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRG GW
Subjt:  EAMAVANMEYRAEKKVKKKAYARLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGGGW

A0A7N2LBH9 Uncharacterized protein

7.9e-87

85.64

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Query:  MSFMKGDLLARTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTIKTISLPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVGEE
        MSF+KGDLL RTRKLVKGLAK++P+WLKAME APP TFPR DG +K ISLPEDVY+KKFFQKHPDSK+EDAIK CSFDPPPAR+FGLRVL+LKEQGV EE
Subjt:  MSFMKGDLLARTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTIKTISLPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVGEE

Query:  EAMAVANMEYRAEKKVKKKAYARLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGGGW
        EAMAVA+MEYRAEKK KKKAY+RLKQIARLQGKKPPPNPYPSAIKEIQAEERK+VRDRFFNPKI EI Q+LKEE+AAE QDR RGGGW
Subjt:  EAMAVANMEYRAEKKVKKKAYARLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGGGW

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G26750.1 unknown protein

4.8e-52

54.59

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Query:  MSFMKGDLLARTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTIKTISLPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVGEE
        MS+MKGDLL++TR+LV GLA  EPVWLKAME +PPP FPR +G I+ I LPED YV+KF  KHP +K +D  K  +F P  AR++G RVLELKE G+ E 
Subjt:  MSFMKGDLLARTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTIKTISLPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVGEE

Query:  EAMAVANMEYRAEKKVKKKAYARLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRG
        +AM+VANMEY +E+K  KKAY RLK++A +Q K PPP PYPSA K +  + +   +DRF  P ++ +  +LK E+   +QDR  G
Subjt:  EAMAVANMEYRAEKKVKKKAYARLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRG

Sequences

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CDS sequence

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ATGTCCTTCATGAAAGGAGATTTGCTAGCTAGGACTAGAAAGCTCGTCAAGGGCTTAGCCAAAGCAGAACCCGTTTGGCTCAAAGCAATGGAACAGGCGCCACCTCCTAC
ATTTCCACGAGTAGATGGAACAATCAAGACAATCAGTCTTCCTGAGGATGTATATGTAAAAAAATTCTTCCAGAAACATCCAGATTCAAAATACGAAGATGCCATCAAGT
TTTGTAGTTTTGATCCTCCTCCAGCTAGAATATTTGGCTTGCGGGTGCTTGAACTGAAGGAACAGGGTGTCGGTGAGGAGGAAGCCATGGCAGTAGCCAATATGGAATAT
CGAGCTGAGAAAAAGGTGAAAAAGAAGGCTTATGCTCGCTTGAAGCAAATTGCACGTCTTCAAGGGAAGAAACCTCCTCCCAACCCCTATCCAAGTGCTATCAAGGAGAT
ACAAGCCGAGGAAAGGAAGTTCGTCCGAGATCGTTTCTTCAACCCCAAGATTAAAGAGATTGCACAAAGGTTGAAGGAGGAGAGGGCAGCTGAAATGCAGGACAGGATGC
GAGGTGGTGGCTGG

mRNA sequence

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Protein sequence

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MSFMKGDLLARTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTIKTISLPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVGEEEAMAVANMEY
RAEKKVKKKAYARLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGGGW

MS015199 (gene) of Bitter gourd (TR) v1 genome