CuGenDBv2

Gene ID	MS015214
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	cell division topological specificity factor homolog, chloroplastic-like
Genome location	scaffold2:1846525..1847082
RNA-Seq Expression	MS015214
Synteny	MS015214
Gene Ontology terms	GO:0010020 - chloroplast fission (biological process) GO:0032955 - regulation of division septum assembly (biological process)
InterPro domains	IPR005527 - Cell division topological specificity factor MinE IPR036707 - Cell division topological specificity factor MinE superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6601459.1 Cell division topological specificity factor-like, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]

8.3e-75

82.8

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Query:  QVDLSGFLHRRFGNKGIKPKWHTMAHENDSIRRISLRDGFESSANYEQSPKSLSQESFILSSINMNFLERLILAWRIIFPSSTSKLKSNATIAKQRLKMI
        +VDLSGF+HRR GNKGIKPKW TMAHEND+I  IS +D  ESSA+YE+SP+SLSQESFILSS+ MNFLERLILAWRIIFPSSTSK  SNA IAKQRLKMI
Subjt:  QVDLSGFLHRRFGNKGIKPKWHTMAHENDSIRRISLRDGFESSANYEQSPKSLSQESFILSSINMNFLERLILAWRIIFPSSTSKLKSNATIAKQRLKMI

Query:  LLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSDDKVQFNVSTDSDLRTIYSVTVPVRRVKANYQGSEEVGAITKTDSKDDGEISGS
        LLSDRCAVNDE KQKIVD++LS+LSDFVEIDS+DKVQFNVSTDSDLRTIYSVTVPVRRVKA+YQGSEE+GA   T+ KDDGE SGS
Subjt:  LLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSDDKVQFNVSTDSDLRTIYSVTVPVRRVKANYQGSEEVGAITKTDSKDDGEISGS

XP_008446409.1 PREDICTED: cell division topological specificity factor homolog, chloroplastic [Cucumis melo]

8.8e-77

84.41

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Query:  QVDLSGFLHRRFGNKGIKPKWHTMAHENDSIRRISLRDGFESSANYEQSPKSLSQESFILSSINMNFLERLILAWRIIFPSSTSKLKSNATIAKQRLKMI
        + D S F+HRR+GNKG +PKWHTMAHENDS+  ISL +  E+SA YEQS KSLSQESFILSS+NMNFLERL LAWRIIFPSS  K+KSNATIAKQRLKMI
Subjt:  QVDLSGFLHRRFGNKGIKPKWHTMAHENDSIRRISLRDGFESSANYEQSPKSLSQESFILSSINMNFLERLILAWRIIFPSSTSKLKSNATIAKQRLKMI

Query:  LLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSDDKVQFNVSTDSDLRTIYSVTVPVRRVKANYQGSEEVGAITKTDSKDDGEISGS
        LLSDRCAVNDEAKQKIVDNILSTLSDFVEIDS+DKVQFNVSTD DLRTIYSVTVPVRRVKA YQGSEEVGAIT TD KDDGE SGS
Subjt:  LLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSDDKVQFNVSTDSDLRTIYSVTVPVRRVKANYQGSEEVGAITKTDSKDDGEISGS

XP_022151073.1 cell division topological specificity factor homolog, chloroplastic-like [Momordica charantia]

6.1e-94

99.46

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Query:  QVDLSGFLHRRFGNKGIKPKWHTMAHENDSIRRISLRDGFESSANYEQSPKSLSQESFILSSINMNFLERLILAWRIIFPSSTSKLKSNATIAKQRLKMI
        +VDLSGFLHRRFGNKGIKPKWHTMAHENDSIRRISLRDGFESSANYEQSPKSLSQESFILSSINMNFLERLILAWRIIFPSSTSKLKSNATIAKQRLKMI
Subjt:  QVDLSGFLHRRFGNKGIKPKWHTMAHENDSIRRISLRDGFESSANYEQSPKSLSQESFILSSINMNFLERLILAWRIIFPSSTSKLKSNATIAKQRLKMI

Query:  LLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSDDKVQFNVSTDSDLRTIYSVTVPVRRVKANYQGSEEVGAITKTDSKDDGEISGS
        LLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSDDKVQFNVSTDSDLRTIYSVTVPVRRVKANYQGSEEVGAITKTDSKDDGEISGS
Subjt:  LLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSDDKVQFNVSTDSDLRTIYSVTVPVRRVKANYQGSEEVGAITKTDSKDDGEISGS

XP_022957365.1 cell division topological specificity factor homolog, chloroplastic-like [Cucurbita moschata]

4.9e-75

83.33

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Query:  QVDLSGFLHRRFGNKGIKPKWHTMAHENDSIRRISLRDGFESSANYEQSPKSLSQESFILSSINMNFLERLILAWRIIFPSSTSKLKSNATIAKQRLKMI
        +VDLSGF+HRR GNKGIKPKW TMAHENDSI  IS +D  ESSA+YE+SP+SLSQESFILSS+ MNFLERLILAWRIIFPSSTSK  SNA IAKQRLKMI
Subjt:  QVDLSGFLHRRFGNKGIKPKWHTMAHENDSIRRISLRDGFESSANYEQSPKSLSQESFILSSINMNFLERLILAWRIIFPSSTSKLKSNATIAKQRLKMI

Query:  LLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSDDKVQFNVSTDSDLRTIYSVTVPVRRVKANYQGSEEVGAITKTDSKDDGEISGS
        LLSDRCAVNDE KQKIVD++LS+LSDFVEIDS+DKVQFNVSTDSDLRTIYSVTVPVRRVKA+YQGSEE+GA   T+ KDDGE SGS
Subjt:  LLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSDDKVQFNVSTDSDLRTIYSVTVPVRRVKANYQGSEEVGAITKTDSKDDGEISGS

XP_023551705.1 cell division topological specificity factor homolog, chloroplastic-like [Cucurbita pepo subsp. pepo]

2.8e-75

83.87

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Query:  QVDLSGFLHRRFGNKGIKPKWHTMAHENDSIRRISLRDGFESSANYEQSPKSLSQESFILSSINMNFLERLILAWRIIFPSSTSKLKSNATIAKQRLKMI
        +VDLSGF+HRR GNKGIKPKW TMAHENDSI  IS +D  ESSA+YE+SP+SLSQESFILSS+ MNFLERLILAWRIIFPSSTSK  SNA IAKQRLKMI
Subjt:  QVDLSGFLHRRFGNKGIKPKWHTMAHENDSIRRISLRDGFESSANYEQSPKSLSQESFILSSINMNFLERLILAWRIIFPSSTSKLKSNATIAKQRLKMI

Query:  LLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSDDKVQFNVSTDSDLRTIYSVTVPVRRVKANYQGSEEVGAITKTDSKDDGEISGS
        LLSDRCAVNDE KQKIVD++LS+LSDFVEIDS+DKVQFNVSTDSDLRTIYSVTVPVRRVKA+YQGSEEVGA   T+ KDDGE SGS
Subjt:  LLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSDDKVQFNVSTDSDLRTIYSVTVPVRRVKANYQGSEEVGAITKTDSKDDGEISGS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KQS2 Uncharacterized protein

6.8e-75

81.72

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Query:  QVDLSGFLHRRFGNKGIKPKWHTMAHENDSIRRISLRDGFESSANYEQSPKSLSQESFILSSINMNFLERLILAWRIIFPSSTSKLKSNATIAKQRLKMI
        + DLS F+HRR+GNKG +PKWHTM+HENDS+  ISL +  ESS NYE+S KSLS+ESFILSS+NMNFLERL LAWRIIFPSS  K++SNATIAKQRLKMI
Subjt:  QVDLSGFLHRRFGNKGIKPKWHTMAHENDSIRRISLRDGFESSANYEQSPKSLSQESFILSSINMNFLERLILAWRIIFPSSTSKLKSNATIAKQRLKMI

Query:  LLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSDDKVQFNVSTDSDLRTIYSVTVPVRRVKANYQGSEEVGAITKTDSKDDGEISGS
        LLSDRCAVNDEAKQKIVDNILSTLSDFVEIDS+DKVQFNVSTD DLRTIYSVTVPVRRVKA YQGSEEVG I  T+ KDDGE SGS
Subjt:  LLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSDDKVQFNVSTDSDLRTIYSVTVPVRRVKANYQGSEEVGAITKTDSKDDGEISGS

A0A1S3BEH9 cell division topological specificity factor homolog, chloroplastic

4.3e-77

84.41

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Query:  QVDLSGFLHRRFGNKGIKPKWHTMAHENDSIRRISLRDGFESSANYEQSPKSLSQESFILSSINMNFLERLILAWRIIFPSSTSKLKSNATIAKQRLKMI
        + D S F+HRR+GNKG +PKWHTMAHENDS+  ISL +  E+SA YEQS KSLSQESFILSS+NMNFLERL LAWRIIFPSS  K+KSNATIAKQRLKMI
Subjt:  QVDLSGFLHRRFGNKGIKPKWHTMAHENDSIRRISLRDGFESSANYEQSPKSLSQESFILSSINMNFLERLILAWRIIFPSSTSKLKSNATIAKQRLKMI

Query:  LLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSDDKVQFNVSTDSDLRTIYSVTVPVRRVKANYQGSEEVGAITKTDSKDDGEISGS
        LLSDRCAVNDEAKQKIVDNILSTLSDFVEIDS+DKVQFNVSTD DLRTIYSVTVPVRRVKA YQGSEEVGAIT TD KDDGE SGS
Subjt:  LLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSDDKVQFNVSTDSDLRTIYSVTVPVRRVKANYQGSEEVGAITKTDSKDDGEISGS

A0A5A7SVD6 Cell division topological specificity factor-like protein

4.3e-77

84.41

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Query:  QVDLSGFLHRRFGNKGIKPKWHTMAHENDSIRRISLRDGFESSANYEQSPKSLSQESFILSSINMNFLERLILAWRIIFPSSTSKLKSNATIAKQRLKMI
        + D S F+HRR+GNKG +PKWHTMAHENDS+  ISL +  E+SA YEQS KSLSQESFILSS+NMNFLERL LAWRIIFPSS  K+KSNATIAKQRLKMI
Subjt:  QVDLSGFLHRRFGNKGIKPKWHTMAHENDSIRRISLRDGFESSANYEQSPKSLSQESFILSSINMNFLERLILAWRIIFPSSTSKLKSNATIAKQRLKMI

Query:  LLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSDDKVQFNVSTDSDLRTIYSVTVPVRRVKANYQGSEEVGAITKTDSKDDGEISGS
        LLSDRCAVNDEAKQKIVDNILSTLSDFVEIDS+DKVQFNVSTD DLRTIYSVTVPVRRVKA YQGSEEVGAIT TD KDDGE SGS
Subjt:  LLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSDDKVQFNVSTDSDLRTIYSVTVPVRRVKANYQGSEEVGAITKTDSKDDGEISGS

A0A6J1DB67 cell division topological specificity factor homolog, chloroplastic-like

3.0e-94

99.46

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Query:  QVDLSGFLHRRFGNKGIKPKWHTMAHENDSIRRISLRDGFESSANYEQSPKSLSQESFILSSINMNFLERLILAWRIIFPSSTSKLKSNATIAKQRLKMI
        +VDLSGFLHRRFGNKGIKPKWHTMAHENDSIRRISLRDGFESSANYEQSPKSLSQESFILSSINMNFLERLILAWRIIFPSSTSKLKSNATIAKQRLKMI
Subjt:  QVDLSGFLHRRFGNKGIKPKWHTMAHENDSIRRISLRDGFESSANYEQSPKSLSQESFILSSINMNFLERLILAWRIIFPSSTSKLKSNATIAKQRLKMI

Query:  LLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSDDKVQFNVSTDSDLRTIYSVTVPVRRVKANYQGSEEVGAITKTDSKDDGEISGS
        LLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSDDKVQFNVSTDSDLRTIYSVTVPVRRVKANYQGSEEVGAITKTDSKDDGEISGS
Subjt:  LLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSDDKVQFNVSTDSDLRTIYSVTVPVRRVKANYQGSEEVGAITKTDSKDDGEISGS

A0A6J1H0C0 cell division topological specificity factor homolog, chloroplastic-like

2.4e-75

83.33

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Query:  QVDLSGFLHRRFGNKGIKPKWHTMAHENDSIRRISLRDGFESSANYEQSPKSLSQESFILSSINMNFLERLILAWRIIFPSSTSKLKSNATIAKQRLKMI
        +VDLSGF+HRR GNKGIKPKW TMAHENDSI  IS +D  ESSA+YE+SP+SLSQESFILSS+ MNFLERLILAWRIIFPSSTSK  SNA IAKQRLKMI
Subjt:  QVDLSGFLHRRFGNKGIKPKWHTMAHENDSIRRISLRDGFESSANYEQSPKSLSQESFILSSINMNFLERLILAWRIIFPSSTSKLKSNATIAKQRLKMI

Query:  LLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSDDKVQFNVSTDSDLRTIYSVTVPVRRVKANYQGSEEVGAITKTDSKDDGEISGS
        LLSDRCAVNDE KQKIVD++LS+LSDFVEIDS+DKVQFNVSTDSDLRTIYSVTVPVRRVKA+YQGSEE+GA   T+ KDDGE SGS
Subjt:  LLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSDDKVQFNVSTDSDLRTIYSVTVPVRRVKANYQGSEEVGAITKTDSKDDGEISGS

SwissProt top hits

e value

%identity

Alignment

Q9C4Z7 Cell division topological specificity factor homolog, chloroplastic

1.2e-39

62.33

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Query:  SSANYEQSPKSLSQ--ESFILSSINMNFLERLILAWRIIFPSSTSKLKSNATIAKQRLKMILLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSDDKVQFN
        ++ +YE SP    Q  ESF+ ++INM F +RL LAW+IIFPS  S+  SNA IAKQRLKMIL SDRC V+DEAK+KIV+NI+  LSDFVEI+S++KVQ N
Subjt:  SSANYEQSPKSLSQ--ESFILSSINMNFLERLILAWRIIFPSSTSKLKSNATIAKQRLKMILLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSDDKVQFN

Query:  VSTDSDLRTIYSVTVPVRRVKANYQGSEEVGAITKTDSKD--DGEI
        VSTD DL TIYSVTVPVRRVK  YQ  +E G IT  + KD  DG +
Subjt:  VSTDSDLRTIYSVTVPVRRVKANYQGSEEVGAITKTDSKD--DGEI

Arabidopsis top hits

e value

%identity

Alignment

AT1G69390.1 homologue of bacterial MinE 1

8.3e-41

62.33

Show/hide

Query:  SSANYEQSPKSLSQ--ESFILSSINMNFLERLILAWRIIFPSSTSKLKSNATIAKQRLKMILLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSDDKVQFN
        ++ +YE SP    Q  ESF+ ++INM F +RL LAW+IIFPS  S+  SNA IAKQRLKMIL SDRC V+DEAK+KIV+NI+  LSDFVEI+S++KVQ N
Subjt:  SSANYEQSPKSLSQ--ESFILSSINMNFLERLILAWRIIFPSSTSKLKSNATIAKQRLKMILLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSDDKVQFN

Query:  VSTDSDLRTIYSVTVPVRRVKANYQGSEEVGAITKTDSKD--DGEI
        VSTD DL TIYSVTVPVRRVK  YQ  +E G IT  + KD  DG +
Subjt:  VSTDSDLRTIYSVTVPVRRVKANYQGSEEVGAITKTDSKD--DGEI

Sequences

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CDS sequence

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CAGGTGGACCTCTCTGGTTTTCTTCACAGGAGATTTGGAAATAAAGGAATCAAGCCAAAATGGCACACCATGGCACATGAAAATGATAGCATACGTAGAATCTCCCTGCG
AGATGGTTTTGAGAGCTCTGCAAATTATGAACAATCACCAAAATCCTTAAGTCAAGAAAGCTTTATCCTTAGTTCCATTAACATGAACTTCTTGGAGCGATTGATATTGG
CTTGGAGGATAATTTTTCCATCATCAACATCTAAATTGAAATCCAACGCTACGATTGCCAAGCAGCGGTTAAAGATGATTCTCTTGTCTGACCGATGTGCAGTTAATGAT
GAAGCTAAACAAAAAATTGTGGACAACATCTTGAGTACTCTTTCAGATTTTGTTGAAATAGATTCAGATGATAAAGTGCAATTCAATGTCTCTACTGATTCAGATCTCAG
AACTATTTACTCTGTCACGGTGCCTGTGCGGAGGGTGAAGGCCAACTATCAAGGCAGTGAGGAAGTTGGAGCAATAACGAAAACAGACTCCAAAGATGATGGGGAAATAT
CTGGCTCC

mRNA sequence

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Protein sequence

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QVDLSGFLHRRFGNKGIKPKWHTMAHENDSIRRISLRDGFESSANYEQSPKSLSQESFILSSINMNFLERLILAWRIIFPSSTSKLKSNATIAKQRLKMILLSDRCAVND
EAKQKIVDNILSTLSDFVEIDSDDKVQFNVSTDSDLRTIYSVTVPVRRVKANYQGSEEVGAITKTDSKDDGEISGS

MS015214 (gene) of Bitter gourd (TR) v1 genome