; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS015232 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015232
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionserine/arginine repetitive matrix protein 1-like
Genome locationscaffold2:1947306..1947662
RNA-Seq ExpressionMS015232
SyntenyMS015232
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575459.1 hypothetical protein SDJN03_26098, partial [Cucurbita argyrosperma subsp. sororia]3.0e-2257.78Show/hide
Query:  DQLHRRREDRPELEHEDFGAKSIGFDGSEIREEVCSQPRILSPLGSPPSRVS---ARDPRPSLP---KTIPIVVKRRPERTHKV--HTPDEEIDD-----
        DQLHRRRE RPELE ED   KSIGFD SEIRE+V SQ  I SP  SPP +VS   +  P P+ P    T P VVKRRP+RTHKV  HTP  EID      
Subjt:  DQLHRRREDRPELEHEDFGAKSIGFDGSEIREEVCSQPRILSPLGSPPSRVS---ARDPRPSLP---KTIPIVVKRRPERTHKV--HTPDEEIDD-----

Query:  ----AQVQRIQLPPLSPPSFNRESEQKRAAKMRRR
            A+ QRI LPPLSPP F RESEQK     ++R
Subjt:  ----AQVQRIQLPPLSPPSFNRESEQKRAAKMRRR

XP_011659637.1 formin-like protein 20 [Cucumis sativus]2.5e-2459.12Show/hide
Query:  DQLHRRREDRPELEHEDFGAKSIGFDGSEIREEVCSQPRILSPLGSPPSRVSARDPRPSLP--------KTIPIVVKRRPERTHKV--HTPDEE------
        DQLHRRRE +PELE  D  AKSI FD SEIRE+V SQP I SP  SPP +VS   PRP  P         TIP +VKRRP+RTHKV  HTPDEE      
Subjt:  DQLHRRREDRPELEHEDFGAKSIGFDGSEIREEVCSQPRILSPLGSPPSRVSARDPRPSLP--------KTIPIVVKRRPERTHKV--HTPDEE------

Query:  ---IDDAQVQRIQLPPLSPPSFNRESEQKRAAKMRRR
            D A  QRIQLPPLSPPSF RESEQK +   ++R
Subjt:  ---IDDAQVQRIQLPPLSPPSFNRESEQKRAAKMRRR

XP_022143734.1 uncharacterized protein C6orf132 homolog [Momordica charantia]9.1e-2762.12Show/hide
Query:  DQLHRRREDRPELEHEDFGAKSIGFDGSEIREEVCSQPRILSPLGSPPSRVSARDPRPSL---PKTIPIVVKRRPERTHKV--HTPDEEIDD--------
        DQLHRRRE RPELEHEDFGA+S GFD S IREEV S+PR+LSP  SPP       P P+L   PKT P VVKRRP RTHKV  HTPD EID         
Subjt:  DQLHRRREDRPELEHEDFGAKSIGFDGSEIREEVCSQPRILSPLGSPPSRVSARDPRPSL---PKTIPIVVKRRPERTHKV--HTPDEEIDD--------

Query:  -AQVQRIQLPPLSPPSFNRESEQKRAAKMRRR
         A  QRIQLPPLSPP+F +ESEQK     ++R
Subjt:  -AQVQRIQLPPLSPPSFNRESEQKRAAKMRRR

XP_023548433.1 protein enabled homolog [Cucurbita pepo subsp. pepo]6.7e-2257.04Show/hide
Query:  DQLHRRREDRPELEHEDFGAKSIGFDGSEIREEVCSQPRILSPLGSPPSRVS---ARDPRPSLP---KTIPIVVKRRPERTHKV--HTPDEEIDD-----
        DQLHRRRE RPELE ED   KSIGFD SE+RE+V SQ  I SP  SPP +VS   +  P P+ P    T P VVKRRP+RTHKV  HTP  EID      
Subjt:  DQLHRRREDRPELEHEDFGAKSIGFDGSEIREEVCSQPRILSPLGSPPSRVS---ARDPRPSLP---KTIPIVVKRRPERTHKV--HTPDEEIDD-----

Query:  ----AQVQRIQLPPLSPPSFNRESEQKRAAKMRRR
            A+ QRI LPPLSPP F RESEQK     ++R
Subjt:  ----AQVQRIQLPPLSPPSFNRESEQKRAAKMRRR

XP_038896222.1 serine/arginine repetitive matrix protein 1-like [Benincasa hispida]2.1e-2360Show/hide
Query:  DQLHRRREDRPELEHEDFGAKSIGFDGSEIREEVCSQPRILSP--LGSPPSRVSARDPRPSLPKT---------IPIVVKRRPERTHKV--HTPDEEIDD
        DQLHRRRE RPELE  D  AKSIGFD SEIRE+V SQP I SP    SPP RVS   P PS P T          P VVKRRP+RTHKV  HTPD EID 
Subjt:  DQLHRRREDRPELEHEDFGAKSIGFDGSEIREEVCSQPRILSP--LGSPPSRVSARDPRPSLPKT---------IPIVVKRRPERTHKV--HTPDEEIDD

Query:  ---------AQVQRIQLPPLSPPSFNRESEQKRAAKMRRR
                 A  QRIQLPPLSPPSF RESEQK     ++R
Subjt:  ---------AQVQRIQLPPLSPPSFNRESEQKRAAKMRRR

TrEMBL top hitse value%identityAlignment
A0A0A0K9L4 Uncharacterized protein1.2e-2459.12Show/hide
Query:  DQLHRRREDRPELEHEDFGAKSIGFDGSEIREEVCSQPRILSPLGSPPSRVSARDPRPSLP--------KTIPIVVKRRPERTHKV--HTPDEE------
        DQLHRRRE +PELE  D  AKSI FD SEIRE+V SQP I SP  SPP +VS   PRP  P         TIP +VKRRP+RTHKV  HTPDEE      
Subjt:  DQLHRRREDRPELEHEDFGAKSIGFDGSEIREEVCSQPRILSPLGSPPSRVSARDPRPSLP--------KTIPIVVKRRPERTHKV--HTPDEE------

Query:  ---IDDAQVQRIQLPPLSPPSFNRESEQKRAAKMRRR
            D A  QRIQLPPLSPPSF RESEQK +   ++R
Subjt:  ---IDDAQVQRIQLPPLSPPSFNRESEQKRAAKMRRR

A0A5A7V0Q3 Serine/arginine repetitive matrix protein 1-like7.3e-2256.93Show/hide
Query:  DQLHRRREDRPELEHEDFGAKSIGFDGSEIREEVCSQPRILSPLGSPPSRVSARDPRPSLP--------KTIPIVVKRRPERTHKV--HTPDEEI-----
        DQLHRRRE +PELE +D  AKSI FD SEIR +V S+P I SP  SPP +VS   PRP  P         TIP +VKRRP+RTHKV  HTP+EEI     
Subjt:  DQLHRRREDRPELEHEDFGAKSIGFDGSEIREEVCSQPRILSPLGSPPSRVSARDPRPSLP--------KTIPIVVKRRPERTHKV--HTPDEEI-----

Query:  ----DDAQVQRIQLPPLSPPSFNRESEQKRAAKMRRR
            D A  QRIQLPPLSPP F RESEQK +   ++R
Subjt:  ----DDAQVQRIQLPPLSPPSFNRESEQKRAAKMRRR

A0A6J1CQ76 uncharacterized protein C6orf132 homolog4.4e-2762.12Show/hide
Query:  DQLHRRREDRPELEHEDFGAKSIGFDGSEIREEVCSQPRILSPLGSPPSRVSARDPRPSL---PKTIPIVVKRRPERTHKV--HTPDEEIDD--------
        DQLHRRRE RPELEHEDFGA+S GFD S IREEV S+PR+LSP  SPP       P P+L   PKT P VVKRRP RTHKV  HTPD EID         
Subjt:  DQLHRRREDRPELEHEDFGAKSIGFDGSEIREEVCSQPRILSPLGSPPSRVSARDPRPSL---PKTIPIVVKRRPERTHKV--HTPDEEIDD--------

Query:  -AQVQRIQLPPLSPPSFNRESEQKRAAKMRRR
         A  QRIQLPPLSPP+F +ESEQK     ++R
Subjt:  -AQVQRIQLPPLSPPSFNRESEQKRAAKMRRR

A0A6J1JVT7 serine/arginine repetitive matrix protein 1-like5.6e-2257.78Show/hide
Query:  DQLHRRREDRPELEHEDFGAKSIGFDGSEIREEVCSQPRILSPLGSPPSRVS---ARDPRPSLP---KTIPIVVKRRPERTHKV--HTPDEEIDD-----
        DQLHRRRE RPELE ED   KSIGFD SEIRE+V SQ  I SP  SPP  VS   +  P P+ P    T P VVKRRP+RTHKV  HTP  EID      
Subjt:  DQLHRRREDRPELEHEDFGAKSIGFDGSEIREEVCSQPRILSPLGSPPSRVS---ARDPRPSLP---KTIPIVVKRRPERTHKV--HTPDEEIDD-----

Query:  ----AQVQRIQLPPLSPPSFNRESEQKRAAKMRRR
            A+ QRI LPPLSPP F RESEQK     ++R
Subjt:  ----AQVQRIQLPPLSPPSFNRESEQKRAAKMRRR

A0A6J1KKJ2 serine/arginine repetitive matrix protein 1-like5.6e-2255.38Show/hide
Query:  DQLHRRREDRPELEHEDFGAKSIGFDGSEIREEVCSQPRILSPLGSPPSRVSARDPRPSLP-KTIPIVVKRRPERTHKV--HTPDEEIDD---------A
        DQLHRR + RPELE ED GAKS GFD SE+ E+V SQP I SP   PP R  +  P    P  T P VVKRRP+RTH V  HTPD  ID          A
Subjt:  DQLHRRREDRPELEHEDFGAKSIGFDGSEIREEVCSQPRILSPLGSPPSRVSARDPRPSLP-KTIPIVVKRRPERTHKV--HTPDEEIDD---------A

Query:  QVQRIQLPPLSPPSFNRESEQKRAAKMRRR
          QRI LPPLSPPSF +ESEQK     ++R
Subjt:  QVQRIQLPPLSPPSFNRESEQKRAAKMRRR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GATCAACTTCATCGTCGTCGTGAAGATCGGCCGGAGCTTGAGCACGAAGATTTCGGTGCCAAAAGTATAGGTTTCGACGGATCTGAGATTCGTGAGGAAGTCTGTTCACA
ACCGCGAATACTTTCTCCGCTAGGATCGCCGCCGTCGCGGGTGTCAGCTCGCGATCCCAGGCCATCGCTGCCCAAGACGATCCCTATAGTGGTTAAACGGAGGCCAGAGA
GAACGCATAAGGTCCATACGCCTGATGAAGAAATCGACGACGCACAAGTTCAACGGATTCAGCTTCCACCACTCTCACCGCCGTCGTTTAACCGGGAATCGGAGCAGAAA
AGAGCGGCAAAAATGAGAAGAAGG
mRNA sequenceShow/hide mRNA sequence
GATCAACTTCATCGTCGTCGTGAAGATCGGCCGGAGCTTGAGCACGAAGATTTCGGTGCCAAAAGTATAGGTTTCGACGGATCTGAGATTCGTGAGGAAGTCTGTTCACA
ACCGCGAATACTTTCTCCGCTAGGATCGCCGCCGTCGCGGGTGTCAGCTCGCGATCCCAGGCCATCGCTGCCCAAGACGATCCCTATAGTGGTTAAACGGAGGCCAGAGA
GAACGCATAAGGTCCATACGCCTGATGAAGAAATCGACGACGCACAAGTTCAACGGATTCAGCTTCCACCACTCTCACCGCCGTCGTTTAACCGGGAATCGGAGCAGAAA
AGAGCGGCAAAAATGAGAAGAAGG
Protein sequenceShow/hide protein sequence
DQLHRRREDRPELEHEDFGAKSIGFDGSEIREEVCSQPRILSPLGSPPSRVSARDPRPSLPKTIPIVVKRRPERTHKVHTPDEEIDDAQVQRIQLPPLSPPSFNRESEQK
RAAKMRRR