; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS015243 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015243
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRibosome maturation factor RimP
Genome locationscaffold2:2006149..2008638
RNA-Seq ExpressionMS015243
SyntenyMS015243
Gene Ontology termsGO:0042274 - ribosomal small subunit biogenesis (biological process)
InterPro domainsIPR003728 - Ribosome maturation factor RimP


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013097.1 rimP, partial [Cucurbita argyrosperma subsp. argyrosperma]2.5e-13278.76Show/hide
Query:  MSGNRIAHTFLHRARLRATSSSISSVERPSSAAFCAESRSFRSSCSSSSRHVDFHRQHAFALSPTAILLLFSTNSTKHFEDEVKEQIPLQYEKDEGGETT
        MSG+RIA T LHRAR  A  SS SS  RPSS  F A++RS +SSCSSSS HV F R+HAFA SP+  + LF+TN +K FEDEVKE  PLQY +DEG ETT
Subjt:  MSGNRIAHTFLHRARLRATSSSISSVERPSSAAFCAESRSFRSSCSSSSRHVDFHRQHAFALSPTAILLLFSTNSTKHFEDEVKEQIPLQYEKDEGGETT

Query:  DGWEDDDDMEPEIGDGGGGGGVVLQGVPWGEHVLSLAHEVLLQFGDDIKLYSFKTTPRGYIYVRLDKLSNEFGCPSLEDLESYTQEYKKRLDATGALGKI
        DGWE+DDD+EPE+GDGGGGGGVVLQGVPWGE VL+LAHEVLLQFGDDI LYSFKTT RGYIYVRLDKLSNE+GCPSLE+LESY+QEYKKRLD TGALG I
Subjt:  DGWEDDDDMEPEIGDGGGGGGVVLQGVPWGEHVLSLAHEVLLQFGDDIKLYSFKTTPRGYIYVRLDKLSNEFGCPSLEDLESYTQEYKKRLDATGALGKI

Query:  PDDLALEVSSPGAERLLKVPDDLFRFKAMPMQVSYLEDIVPGGTENDGVFILDHVETESKSCVWKLANVRENRDPLSKGRPLTRKQKEWRLELPYANHKK
        PDDLALEVSSPGAERLLKVPDDLFRFKAMPM+V Y+ED    GTENDGVF++DHV+ ES+SCVWKLANV+ENRDPLSKGRPLTRKQK+WRL+LP+ NHKK
Subjt:  PDDLALEVSSPGAERLLKVPDDLFRFKAMPMQVSYLEDIVPGGTENDGVFILDHVETESKSCVWKLANVRENRDPLSKGRPLTRKQKEWRLELPYANHKK

Query:  VFLYLE
        VFLYLE
Subjt:  VFLYLE

XP_022149048.1 uncharacterized protein LOC111017562 [Momordica charantia]2.3e-17098.7Show/hide
Query:  MSGNRIAHTFLHRARLRATSSSISSVERPSSAAFCAESRSFRSSCSSSSRHVDFHRQHAFALSPTAILLLFSTNSTKHFEDEVKEQIPLQYEKDEGGETT
        MSGNRIAHTFLHRARLRATSSSISSVERPSSAAFCAESRSFRSSCSSSSRHVDFHRQHAFALSPTAIL LFSTNSTKHFEDEV+EQIPLQYEKDEGGETT
Subjt:  MSGNRIAHTFLHRARLRATSSSISSVERPSSAAFCAESRSFRSSCSSSSRHVDFHRQHAFALSPTAILLLFSTNSTKHFEDEVKEQIPLQYEKDEGGETT

Query:  DGWEDDDDMEPEIGDGGGGGGVVLQGVPWGEHVLSLAHEVLLQFGDDIKLYSFKTTPRGYIYVRLDKLSNEFGCPSLEDLESYTQEYKKRLDATGALGKI
        DGWEDDDDMEPEIGDGGGGGGVVLQGVPWGEHVLSLAHEVLLQFGDDIKLYSFKTTPRGYIYVRLDKLSNEFGCPSLEDLESYTQEYKKRL ATGALGKI
Subjt:  DGWEDDDDMEPEIGDGGGGGGVVLQGVPWGEHVLSLAHEVLLQFGDDIKLYSFKTTPRGYIYVRLDKLSNEFGCPSLEDLESYTQEYKKRLDATGALGKI

Query:  PDDLALEVSSPGAERLLKVPDDLFRFKAMPMQVSYLEDIVPGGTENDGVFILDHVETESKSCVWKLANVRENRDPLSKGRPLTRKQKEWRLELPYANHKK
        PDDLALEVSSPGAERLLKVPDDLFRFKAMPMQVSYLED+VPGGTENDGVFILDHVETESKSCVWKLANVRENRDPLSKGRPLTRKQKEWRLELPYANHKK
Subjt:  PDDLALEVSSPGAERLLKVPDDLFRFKAMPMQVSYLEDIVPGGTENDGVFILDHVETESKSCVWKLANVRENRDPLSKGRPLTRKQKEWRLELPYANHKK

Query:  VFLYLEC
        VFLYLEC
Subjt:  VFLYLEC

XP_022967944.1 uncharacterized protein LOC111467332 isoform X1 [Cucurbita maxima]1.3e-13378.76Show/hide
Query:  MSGNRIAHTFLHRARLRATSSSISSVERPSSAAFCAESRSFRSSCSSSSRHVDFHRQHAFALSPTAILLLFSTNSTKHFEDEVKEQIPLQYEKDEGGETT
        MSG+RIA T LHRAR  A  SS SS  RPSS  FCA++RS +SSCSSSS HV F R+HAFA SP+  + LF+TN +K FEDE+K Q PLQY +DEG ETT
Subjt:  MSGNRIAHTFLHRARLRATSSSISSVERPSSAAFCAESRSFRSSCSSSSRHVDFHRQHAFALSPTAILLLFSTNSTKHFEDEVKEQIPLQYEKDEGGETT

Query:  DGWEDDDDMEPEIGDGGGGGGVVLQGVPWGEHVLSLAHEVLLQFGDDIKLYSFKTTPRGYIYVRLDKLSNEFGCPSLEDLESYTQEYKKRLDATGALGKI
        DGWE+DDD+EPE+GDGGGGGGVVLQGVPWGE VL+LAHEVLLQ GDDIKLYSFKTT RGYIYVRLDKLSNE+GCPSLE+LESY+QEYKKRLD TGALG I
Subjt:  DGWEDDDDMEPEIGDGGGGGGVVLQGVPWGEHVLSLAHEVLLQFGDDIKLYSFKTTPRGYIYVRLDKLSNEFGCPSLEDLESYTQEYKKRLDATGALGKI

Query:  PDDLALEVSSPGAERLLKVPDDLFRFKAMPMQVSYLEDIVPGGTENDGVFILDHVETESKSCVWKLANVRENRDPLSKGRPLTRKQKEWRLELPYANHKK
        PDDLALEVSSPGAERLLKVPDDLFRFKAMPM+V Y+ED    GTENDGVF++DHV+ ES+SCVWKLANV+ENRDPLSKGRPLTRKQK+WRL+LP+ NHKK
Subjt:  PDDLALEVSSPGAERLLKVPDDLFRFKAMPMQVSYLEDIVPGGTENDGVFILDHVETESKSCVWKLANVRENRDPLSKGRPLTRKQKEWRLELPYANHKK

Query:  VFLYLE
        VFLYLE
Subjt:  VFLYLE

XP_023541150.1 uncharacterized protein LOC111801398 isoform X1 [Cucurbita pepo subsp. pepo]2.0e-13479.41Show/hide
Query:  MSGNRIAHTFLHRARLRATSSSISSVERPSSAAFCAESRSFRSSCSSSSRHVDFHRQHAFALSPTAILLLFSTNSTKHFEDEVKEQIPLQYEKDEGGETT
        MSGN IA T LHR+R  A   S SS  RPSS  FCA++RS +SSCSSSS HV F R+HAFA SP+  +  F+TNS+K FEDEVKEQ PLQY +DEG ETT
Subjt:  MSGNRIAHTFLHRARLRATSSSISSVERPSSAAFCAESRSFRSSCSSSSRHVDFHRQHAFALSPTAILLLFSTNSTKHFEDEVKEQIPLQYEKDEGGETT

Query:  DGWEDDDDMEPEIGDGGGGGGVVLQGVPWGEHVLSLAHEVLLQFGDDIKLYSFKTTPRGYIYVRLDKLSNEFGCPSLEDLESYTQEYKKRLDATGALGKI
        DGWE+DDD+EPE+GDGGGGGGVVLQGVPWGE VL+LAHEVLLQFGDDIKLYSFKTT RGYIYVRLDKLSNE+GCPSLE+LESY+QEYKKRLD TGALG I
Subjt:  DGWEDDDDMEPEIGDGGGGGGVVLQGVPWGEHVLSLAHEVLLQFGDDIKLYSFKTTPRGYIYVRLDKLSNEFGCPSLEDLESYTQEYKKRLDATGALGKI

Query:  PDDLALEVSSPGAERLLKVPDDLFRFKAMPMQVSYLEDIVPGGTENDGVFILDHVETESKSCVWKLANVRENRDPLSKGRPLTRKQKEWRLELPYANHKK
        PDDLALEVSSPGAERLLKVPDDLFRFKAMPMQV Y+ED    GTENDGVF++DHV+ ES+SCVWKLANV+ENRDPLSKGRPLTRKQK+WRL+LP+ NHKK
Subjt:  PDDLALEVSSPGAERLLKVPDDLFRFKAMPMQVSYLEDIVPGGTENDGVFILDHVETESKSCVWKLANVRENRDPLSKGRPLTRKQKEWRLELPYANHKK

Query:  VFLYLE
        VFLYLE
Subjt:  VFLYLE

XP_038891543.1 uncharacterized protein LOC120080930 [Benincasa hispida]5.5e-13278.5Show/hide
Query:  MSGNRIAHTFLHRARLRATSSSISSVERPSSAAFCAESRSFRSSCSSSSRHVDFHRQHAFALSPTAILLLFSTNSTKHFEDEVKEQIPLQYEKDEGGETT
        M GN IAHT LHRAR+ A SSS+SS+  PSS  F +E+ S +S+CSSSSR     R HAFA  P A L LF+TNS+K F+DE KE  PLQY  DEGGETT
Subjt:  MSGNRIAHTFLHRARLRATSSSISSVERPSSAAFCAESRSFRSSCSSSSRHVDFHRQHAFALSPTAILLLFSTNSTKHFEDEVKEQIPLQYEKDEGGETT

Query:  DGWEDDDDMEPEIGDGGGGGGVVLQGVPWGEHVLSLAHEVLLQFGDDIKLYSFKTTPRGYIYVRLDKLSNEFGCPSLEDLESYTQEYKKRLDATGALGKI
        DGWE+DDD+EPE+GDGGGGGGVVLQGVPWGE VL LA EVLLQFGDDIKLYSFKTTPRGYIYVRLDKLSNEFGCPSLE+LESY+QEYKKRLD TGALG I
Subjt:  DGWEDDDDMEPEIGDGGGGGGVVLQGVPWGEHVLSLAHEVLLQFGDDIKLYSFKTTPRGYIYVRLDKLSNEFGCPSLEDLESYTQEYKKRLDATGALGKI

Query:  PDDLALEVSSPGAERLLKVPDDLFRFKAMPMQVSYLEDIVPGGTENDGVFILDHVETESKSCVWKLANVRENRDPLSKGRPLTRKQKEWRLELPYANHKK
        PDDLALEVSSPGAERLLKVPDDLFRFKA+PM+VSY+E++   GTENDGV++LD VE+E + C+WKLANVRENRDPLSKGRPLTRKQKEWRL+LPYANHKK
Subjt:  PDDLALEVSSPGAERLLKVPDDLFRFKAMPMQVSYLEDIVPGGTENDGVFILDHVETESKSCVWKLANVRENRDPLSKGRPLTRKQKEWRLELPYANHKK

Query:  VFLYLEC
        VFLYLEC
Subjt:  VFLYLEC

TrEMBL top hitse value%identityAlignment
A0A0A0KW71 Uncharacterized protein1.0e-12073.05Show/hide
Query:  MSGNRIAHTFLHRARLRATSSSISSVERPSSAAFCAESRSFRSSCSSSSRHVDFHRQHAFALSPTAILLLFSTNSTKHFEDEVKEQIPLQYEKDEGGETT
        M  N+IAHT L R+ + A SS +SS+  PSS  F +E    +++CSS S      R HAF  S    L LF+TNS+KHF DEVKEQ P QY +++ GETT
Subjt:  MSGNRIAHTFLHRARLRATSSSISSVERPSSAAFCAESRSFRSSCSSSSRHVDFHRQHAFALSPTAILLLFSTNSTKHFEDEVKEQIPLQYEKDEGGETT

Query:  DGW-EDDDDMEPEIGDGGGGGGVVLQGVPWGEHVLSLAHEVLLQFGDDIKLYSFKTTPRGYIYVRLDKLSNEFGCPSLEDLESYTQEYKKRLDATGALGK
        DGW EDDDD+EPE+GDGG GGGVVLQGVPWGEHVL LA EVLLQFGDDIKLYSFK TPRGYIYVRLDKLS+EFGCP+LE+L+SY++EYKKRLD TGALG 
Subjt:  DGW-EDDDDMEPEIGDGGGGGGVVLQGVPWGEHVLSLAHEVLLQFGDDIKLYSFKTTPRGYIYVRLDKLSNEFGCPSLEDLESYTQEYKKRLDATGALGK

Query:  IPDDLALEVSSPGAERLLKVPDDLFRFKAMPMQVSYLEDIVPGGTENDGVFILDHVETESKSCVWKLANVRENRDPLSKGRPLTRKQKEWRLELPYANHK
        IPDDLALEVSSPGAERLLK+PDDL RFKA PM+VSY+ED+   G+ENDGVF+LDH+E ES+SC+WKLANVRENRDPLSKGRPLTRKQKEWRL+LPYANHK
Subjt:  IPDDLALEVSSPGAERLLKVPDDLFRFKAMPMQVSYLEDIVPGGTENDGVFILDHVETESKSCVWKLANVRENRDPLSKGRPLTRKQKEWRLELPYANHK

Query:  KVFLYLEC
        KVFLYL+C
Subjt:  KVFLYLEC

A0A1S3BF38 uncharacterized protein LOC103489189 isoform X32.0e-12474.35Show/hide
Query:  MSGNRIAHTFLHRARLRATSSSISSVERPSSAAFCAESRSFRSSCSSSSRHVDFHRQHAFALSPTAILLLFSTNSTKHFEDEVKEQIPLQYEKDEGGETT
        M GN+IA T L R+R+ A SS +SS+  PSS  F +E+  F+++CSS S      R HAF  SP   L LF T+S+K F DEVKEQ PLQY +++ GETT
Subjt:  MSGNRIAHTFLHRARLRATSSSISSVERPSSAAFCAESRSFRSSCSSSSRHVDFHRQHAFALSPTAILLLFSTNSTKHFEDEVKEQIPLQYEKDEGGETT

Query:  DGW-EDDDDMEPEIGDGGGGGGVVLQGVPWGEHVLSLAHEVLLQFGDDIKLYSFKTTPRGYIYVRLDKLSNEFGCPSLEDLESYTQEYKKRLDATGALGK
        DGW EDDDD+EPE+GDGG GGGVVLQGVPWGEHVL LA EVLLQFGDDIKLYSFK TPRGYIYVRLDKLS++FGCPS+E+L+SY++EYKKRLD TGALG 
Subjt:  DGW-EDDDDMEPEIGDGGGGGGVVLQGVPWGEHVLSLAHEVLLQFGDDIKLYSFKTTPRGYIYVRLDKLSNEFGCPSLEDLESYTQEYKKRLDATGALGK

Query:  IPDDLALEVSSPGAERLLKVPDDLFRFKAMPMQVSYLEDIVPGGTENDGVFILDHVETESKSCVWKLANVRENRDPLSKGRPLTRKQKEWRLELPYANHK
        IPDDLALEVSSPGAERLLKVPDDL RFKA PM+VSY+ED+   G+ENDGVF+LDHVE ES+SC+WKLANVRENRDPLSKGRPLTRKQKEWRL+LPYANHK
Subjt:  IPDDLALEVSSPGAERLLKVPDDLFRFKAMPMQVSYLEDIVPGGTENDGVFILDHVETESKSCVWKLANVRENRDPLSKGRPLTRKQKEWRLELPYANHK

Query:  KVFLYLEC
        KVFLYLEC
Subjt:  KVFLYLEC

A0A6J1D5R7 uncharacterized protein LOC1110175621.1e-17098.7Show/hide
Query:  MSGNRIAHTFLHRARLRATSSSISSVERPSSAAFCAESRSFRSSCSSSSRHVDFHRQHAFALSPTAILLLFSTNSTKHFEDEVKEQIPLQYEKDEGGETT
        MSGNRIAHTFLHRARLRATSSSISSVERPSSAAFCAESRSFRSSCSSSSRHVDFHRQHAFALSPTAIL LFSTNSTKHFEDEV+EQIPLQYEKDEGGETT
Subjt:  MSGNRIAHTFLHRARLRATSSSISSVERPSSAAFCAESRSFRSSCSSSSRHVDFHRQHAFALSPTAILLLFSTNSTKHFEDEVKEQIPLQYEKDEGGETT

Query:  DGWEDDDDMEPEIGDGGGGGGVVLQGVPWGEHVLSLAHEVLLQFGDDIKLYSFKTTPRGYIYVRLDKLSNEFGCPSLEDLESYTQEYKKRLDATGALGKI
        DGWEDDDDMEPEIGDGGGGGGVVLQGVPWGEHVLSLAHEVLLQFGDDIKLYSFKTTPRGYIYVRLDKLSNEFGCPSLEDLESYTQEYKKRL ATGALGKI
Subjt:  DGWEDDDDMEPEIGDGGGGGGVVLQGVPWGEHVLSLAHEVLLQFGDDIKLYSFKTTPRGYIYVRLDKLSNEFGCPSLEDLESYTQEYKKRLDATGALGKI

Query:  PDDLALEVSSPGAERLLKVPDDLFRFKAMPMQVSYLEDIVPGGTENDGVFILDHVETESKSCVWKLANVRENRDPLSKGRPLTRKQKEWRLELPYANHKK
        PDDLALEVSSPGAERLLKVPDDLFRFKAMPMQVSYLED+VPGGTENDGVFILDHVETESKSCVWKLANVRENRDPLSKGRPLTRKQKEWRLELPYANHKK
Subjt:  PDDLALEVSSPGAERLLKVPDDLFRFKAMPMQVSYLEDIVPGGTENDGVFILDHVETESKSCVWKLANVRENRDPLSKGRPLTRKQKEWRLELPYANHKK

Query:  VFLYLEC
        VFLYLEC
Subjt:  VFLYLEC

A0A6J1FZQ6 uncharacterized protein LOC1114493652.6e-13278.43Show/hide
Query:  MSGNRIAHTFLHRARLRATSSSISSVERPSSAAFCAESRSFRSSCSSSSRHVDFHRQHAFALSPTAILLLFSTNSTKHFEDEVKEQIPLQYEKDEGGETT
        MSG+RIA T LHRAR  A  SS SS  RPSS  F A++RS +SSCSSSS HV F R+HAFA SP+  + LF+TN +K FEDEVKE  PLQY +DEG ETT
Subjt:  MSGNRIAHTFLHRARLRATSSSISSVERPSSAAFCAESRSFRSSCSSSSRHVDFHRQHAFALSPTAILLLFSTNSTKHFEDEVKEQIPLQYEKDEGGETT

Query:  DGWEDDDDMEPEIGDGGGGGGVVLQGVPWGEHVLSLAHEVLLQFGDDIKLYSFKTTPRGYIYVRLDKLSNEFGCPSLEDLESYTQEYKKRLDATGALGKI
        DGWE+DDD+EPE+GDGGGGGGVVLQGVPWGE VL+LAHEVLLQFGDDI LYSFKTT RGYIYVRLDKLSNE+GCPSLE+LESY+QEYKKRLD TGALG I
Subjt:  DGWEDDDDMEPEIGDGGGGGGVVLQGVPWGEHVLSLAHEVLLQFGDDIKLYSFKTTPRGYIYVRLDKLSNEFGCPSLEDLESYTQEYKKRLDATGALGKI

Query:  PDDLALEVSSPGAERLLKVPDDLFRFKAMPMQVSYLEDIVPGGTENDGVFILDHVETESKSCVWKLANVRENRDPLSKGRPLTRKQKEWRLELPYANHKK
        PDDLALEVSSPGAERLLKVPDDLFRFKAMPM+V Y+ED    GTENDGVF++DHV+ ES+SCVWKLANV+ENRDPLSKGRPLTRKQK+WRL++P+ NHKK
Subjt:  PDDLALEVSSPGAERLLKVPDDLFRFKAMPMQVSYLEDIVPGGTENDGVFILDHVETESKSCVWKLANVRENRDPLSKGRPLTRKQKEWRLELPYANHKK

Query:  VFLYLE
        VFLYLE
Subjt:  VFLYLE

A0A6J1HY61 uncharacterized protein LOC111467332 isoform X16.3e-13478.76Show/hide
Query:  MSGNRIAHTFLHRARLRATSSSISSVERPSSAAFCAESRSFRSSCSSSSRHVDFHRQHAFALSPTAILLLFSTNSTKHFEDEVKEQIPLQYEKDEGGETT
        MSG+RIA T LHRAR  A  SS SS  RPSS  FCA++RS +SSCSSSS HV F R+HAFA SP+  + LF+TN +K FEDE+K Q PLQY +DEG ETT
Subjt:  MSGNRIAHTFLHRARLRATSSSISSVERPSSAAFCAESRSFRSSCSSSSRHVDFHRQHAFALSPTAILLLFSTNSTKHFEDEVKEQIPLQYEKDEGGETT

Query:  DGWEDDDDMEPEIGDGGGGGGVVLQGVPWGEHVLSLAHEVLLQFGDDIKLYSFKTTPRGYIYVRLDKLSNEFGCPSLEDLESYTQEYKKRLDATGALGKI
        DGWE+DDD+EPE+GDGGGGGGVVLQGVPWGE VL+LAHEVLLQ GDDIKLYSFKTT RGYIYVRLDKLSNE+GCPSLE+LESY+QEYKKRLD TGALG I
Subjt:  DGWEDDDDMEPEIGDGGGGGGVVLQGVPWGEHVLSLAHEVLLQFGDDIKLYSFKTTPRGYIYVRLDKLSNEFGCPSLEDLESYTQEYKKRLDATGALGKI

Query:  PDDLALEVSSPGAERLLKVPDDLFRFKAMPMQVSYLEDIVPGGTENDGVFILDHVETESKSCVWKLANVRENRDPLSKGRPLTRKQKEWRLELPYANHKK
        PDDLALEVSSPGAERLLKVPDDLFRFKAMPM+V Y+ED    GTENDGVF++DHV+ ES+SCVWKLANV+ENRDPLSKGRPLTRKQK+WRL+LP+ NHKK
Subjt:  PDDLALEVSSPGAERLLKVPDDLFRFKAMPMQVSYLEDIVPGGTENDGVFILDHVETESKSCVWKLANVRENRDPLSKGRPLTRKQKEWRLELPYANHKK

Query:  VFLYLE
        VFLYLE
Subjt:  VFLYLE

SwissProt top hitse value%identityAlignment
B0SH16 Ribosome maturation factor RimP6.7e-0828.48Show/hide
Query:  VLLQFGDDIKLYSFKTTPR---GYIYVRLDKLSNEFGCPSLEDLESYTQEYKKRLDATGALGKIPDDLALEVSSPGAERLLKVPDDLFRFKAMPMQVSYL
        +L      + L+S +   R     I + LD L+++ G  SLED E+ ++  K+ LD  G       D  L+VSS GAER+L++P+DL RF+ + ++   L
Subjt:  VLLQFGDDIKLYSFKTTPR---GYIYVRLDKLSNEFGCPSLEDLESYTQEYKKRLDATGALGKIPDDLALEVSSPGAERLLKVPDDLFRFKAMPMQVSYL

Query:  EDIVPGGTENDGVFILDHVETESKSCVWKLANVRENRDPLSKGRPLTRKQK
        E  +  G  +  ++ L  V  +S          R  ++  S   P+   +K
Subjt:  EDIVPGGTENDGVFILDHVETESKSCVWKLANVRENRDPLSKGRPLTRKQK

B0SQH2 Ribosome maturation factor RimP6.7e-0828.48Show/hide
Query:  VLLQFGDDIKLYSFKTTPR---GYIYVRLDKLSNEFGCPSLEDLESYTQEYKKRLDATGALGKIPDDLALEVSSPGAERLLKVPDDLFRFKAMPMQVSYL
        +L      + L+S +   R     I + LD L+++ G  SLED E+ ++  K+ LD  G       D  L+VSS GAER+L++P+DL RF+ + ++   L
Subjt:  VLLQFGDDIKLYSFKTTPR---GYIYVRLDKLSNEFGCPSLEDLESYTQEYKKRLDATGALGKIPDDLALEVSSPGAERLLKVPDDLFRFKAMPMQVSYL

Query:  EDIVPGGTENDGVFILDHVETESKSCVWKLANVRENRDPLSKGRPLTRKQK
        E  +  G  +  ++ L  V  +S          R  ++  S   P+   +K
Subjt:  EDIVPGGTENDGVFILDHVETESKSCVWKLANVRENRDPLSKGRPLTRKQK

Q04U33 Ribosome maturation factor RimP3.3e-0736.96Show/hide
Query:  IKLYSFKTTPR---GYIYVRLDKLSNEFGCPSLEDLESYTQEYKKRLDATGALGKIPD-DLALEVSSPGAERLLKVPDDLFRFKAMPMQVSY
        +KLYS K   R     I V LD L + +G  SL + E  +++ K+ L+        PD D  L+VSS GAER L +P+D+ RF+ +P+++ +
Subjt:  IKLYSFKTTPR---GYIYVRLDKLSNEFGCPSLEDLESYTQEYKKRLDATGALGKIPD-DLALEVSSPGAERLLKVPDDLFRFKAMPMQVSY

Q72NX1 Ribosome maturation factor RimP8.8e-0835.51Show/hide
Query:  IKLYSFKTTPR---GYIYVRLDKLSNEFGCPSLEDLESYTQEYKKRLDATGALGKIPD-DLALEVSSPGAERLLKVPDDLFRFKAMPMQVSYLEDIVPGG
        +KLYS K   R     I V LD L + +G  SL + E  +++ K+ L+        PD D  L+VSS GAER L +P DL RF+ +P+++ +  +     
Subjt:  IKLYSFKTTPR---GYIYVRLDKLSNEFGCPSLEDLESYTQEYKKRLDATGALGKIPD-DLALEVSSPGAERLLKVPDDLFRFKAMPMQVSYLEDIVPGG

Query:  TENDGVF
         E +G+F
Subjt:  TENDGVF

Q8F7K3 Ribosome maturation factor RimP8.8e-0835.51Show/hide
Query:  IKLYSFKTTPR---GYIYVRLDKLSNEFGCPSLEDLESYTQEYKKRLDATGALGKIPD-DLALEVSSPGAERLLKVPDDLFRFKAMPMQVSYLEDIVPGG
        +KLYS K   R     I V LD L + +G  SL + E  +++ K+ L+        PD D  L+VSS GAER L +P DL RF+ +P+++ +  +     
Subjt:  IKLYSFKTTPR---GYIYVRLDKLSNEFGCPSLEDLESYTQEYKKRLDATGALGKIPD-DLALEVSSPGAERLLKVPDDLFRFKAMPMQVSYLEDIVPGG

Query:  TENDGVF
         E +G+F
Subjt:  TENDGVF

Arabidopsis top hitse value%identityAlignment
AT1G69210.1 Uncharacterised protein family UPF00903.6e-7358.48Show/hide
Query:  EQIPLQYEKDEGGETTDGWE--DDDDMEPEIGDGGGGGGVVLQGVPWGEHVLSLAHEVLLQFGDDIKLYSFKTTPRGYIYVRLDKLSNEFGCPSLEDLES
        E+   +Y+  +  E  + WE  +D+D+E ++GDGG GGG+VL+GV WGE VLS+A +VL Q   D++L++FKT+PRGYIYVRLDKLS E+GCP++++LE 
Subjt:  EQIPLQYEKDEGGETTDGWE--DDDDMEPEIGDGGGGGGVVLQGVPWGEHVLSLAHEVLLQFGDDIKLYSFKTTPRGYIYVRLDKLSNEFGCPSLEDLES

Query:  YTQEYKKRLDATGALGKIPDDLALEVSSPGAERLLKVPDDLFRFKAMPMQVSYLEDIVPGGTENDGVFILDHVETESKSCVWKLANVRENRDPLSKGRPL
        +++E+KKRLD  GA   IP+DLALEVSSPGAERLL+VP+DL RFK MPM VSY+E+         GVF+L+ ++ ES +CVWKLA+VRENRDP SKGRPL
Subjt:  YTQEYKKRLDATGALGKIPDDLALEVSSPGAERLLKVPDDLFRFKAMPMQVSYLEDIVPGGTENDGVFILDHVETESKSCVWKLANVRENRDPLSKGRPL

Query:  TRKQKEWRLELPYANHKKVFLYLE
        +RKQK+ R+ LP+A+HKK+ LYL+
Subjt:  TRKQKEWRLELPYANHKKVFLYLE

AT1G69210.2 Uncharacterised protein family UPF00906.6e-3554.76Show/hide
Query:  EQIPLQYEKDEGGETTDGWE--DDDDMEPEIGDGGGGGGVVLQGVPWGEHVLSLAHEVLLQFGDDIKLYSFKTTPRGYIYVRLDKLSNEFGCPSLEDLES
        E+   +Y+  +  E  + WE  +D+D+E ++GDGG GGG+VL+GV WGE VLS+A +VL Q   D++L++FKT+PRGYIYVRLDKLS E+GCP++++LE 
Subjt:  EQIPLQYEKDEGGETTDGWE--DDDDMEPEIGDGGGGGGVVLQGVPWGEHVLSLAHEVLLQFGDDIKLYSFKTTPRGYIYVRLDKLSNEFGCPSLEDLES

Query:  YTQEYKKRLDATGALGKIPDDLALEV
        +++E+KKRLD  GA   IP+DLALEV
Subjt:  YTQEYKKRLDATGALGKIPDDLALEV

AT1G77122.1 Uncharacterised protein family UPF00903.4e-4740.83Show/hide
Query:  EDEVKEQIPLQYEKDEGGE---TTDGWEDDDDMEPEI---------GDGGGGGGVVLQGVPWGEHVLSLAHEVLLQFGDDIKLYSFKTTPRGYIYVRLDK
        E+E +E+I L  E  E  +     D +++DDD + E          GDGGGGGG+ L G  W +  L+LA +V   F  D+ +Y+FKT P   I VR+++
Subjt:  EDEVKEQIPLQYEKDEGGE---TTDGWEDDDDMEPEI---------GDGGGGGGVVLQGVPWGEHVLSLAHEVLLQFGDDIKLYSFKTTPRGYIYVRLDK

Query:  LSNEFGCPSLEDLESYTQEYKKRLDATGALGKIPDDLALEVSSPGAERLLKVPDDLFRFKAMPMQVSYLEDIVPGGTENDGVFILDHVETESKSCVWKLA
        L+N+FG P++ED+E+++  Y+ +L        IPD+++LEVSSPG ER++++P DL R+K  PM V Y  +     TE DG+F L   + E+K C+W +A
Subjt:  LSNEFGCPSLEDLESYTQEYKKRLDATGALGKIPDDLALEVSSPGAERLLKVPDDLFRFKAMPMQVSYLEDIVPGGTENDGVFILDHVETESKSCVWKLA

Query:  NVRENRDPLSKGRPLTRKQKEWRLELPYANHKKVFLYLEC
        ++R NR+   KGRPL++KQ+EWRLE  + + + V L+ EC
Subjt:  NVRENRDPLSKGRPLTRKQKEWRLELPYANHKKVFLYLEC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGGTAATAGGATTGCTCATACGTTCCTACATCGCGCTCGGTTGCGGGCCACTTCCTCTTCAATTTCCTCCGTCGAAAGGCCGTCTTCTGCAGCTTTTTGCGCCGA
ATCAAGGTCTTTTCGAAGTTCTTGCTCTTCTTCATCTCGTCATGTTGATTTCCATCGCCAGCATGCATTTGCACTTTCTCCCACCGCAATCCTACTGTTATTCAGTACCA
ATTCCACTAAACACTTTGAAGATGAAGTGAAAGAACAAATTCCACTCCAATATGAGAAGGATGAAGGGGGAGAAACCACAGATGGATGGGAAGATGACGATGATATGGAG
CCTGAGATTGGTGATGGAGGGGGTGGTGGTGGTGTTGTTTTGCAAGGCGTGCCTTGGGGTGAACATGTTCTCTCTCTTGCTCATGAGGTCCTGCTGCAATTTGGCGATGA
CATAAAACTCTATTCCTTTAAGACTACTCCCCGTGGATATATCTATGTCAGATTAGACAAGCTCTCAAACGAATTTGGGTGTCCAAGCTTGGAGGATCTTGAAAGTTATA
CCCAAGAGTACAAGAAAAGATTAGATGCAACTGGGGCACTGGGAAAGATTCCCGATGATTTAGCTCTTGAGGTATCATCTCCAGGTGCAGAGAGATTACTGAAGGTCCCA
GATGATCTGTTTAGATTTAAAGCCATGCCAATGCAAGTTTCCTATTTAGAAGATATAGTCCCAGGAGGCACTGAAAATGATGGAGTTTTTATATTGGATCACGTGGAAAC
GGAATCTAAGAGCTGTGTCTGGAAATTGGCAAACGTAAGGGAAAATCGAGATCCTTTAAGCAAGGGTAGGCCGTTGACTCGTAAGCAGAAAGAATGGAGGTTAGAATTAC
CCTATGCAAATCATAAGAAGGTATTCCTTTACCTTGAATGC
mRNA sequenceShow/hide mRNA sequence
ATGAGTGGTAATAGGATTGCTCATACGTTCCTACATCGCGCTCGGTTGCGGGCCACTTCCTCTTCAATTTCCTCCGTCGAAAGGCCGTCTTCTGCAGCTTTTTGCGCCGA
ATCAAGGTCTTTTCGAAGTTCTTGCTCTTCTTCATCTCGTCATGTTGATTTCCATCGCCAGCATGCATTTGCACTTTCTCCCACCGCAATCCTACTGTTATTCAGTACCA
ATTCCACTAAACACTTTGAAGATGAAGTGAAAGAACAAATTCCACTCCAATATGAGAAGGATGAAGGGGGAGAAACCACAGATGGATGGGAAGATGACGATGATATGGAG
CCTGAGATTGGTGATGGAGGGGGTGGTGGTGGTGTTGTTTTGCAAGGCGTGCCTTGGGGTGAACATGTTCTCTCTCTTGCTCATGAGGTCCTGCTGCAATTTGGCGATGA
CATAAAACTCTATTCCTTTAAGACTACTCCCCGTGGATATATCTATGTCAGATTAGACAAGCTCTCAAACGAATTTGGGTGTCCAAGCTTGGAGGATCTTGAAAGTTATA
CCCAAGAGTACAAGAAAAGATTAGATGCAACTGGGGCACTGGGAAAGATTCCCGATGATTTAGCTCTTGAGGTATCATCTCCAGGTGCAGAGAGATTACTGAAGGTCCCA
GATGATCTGTTTAGATTTAAAGCCATGCCAATGCAAGTTTCCTATTTAGAAGATATAGTCCCAGGAGGCACTGAAAATGATGGAGTTTTTATATTGGATCACGTGGAAAC
GGAATCTAAGAGCTGTGTCTGGAAATTGGCAAACGTAAGGGAAAATCGAGATCCTTTAAGCAAGGGTAGGCCGTTGACTCGTAAGCAGAAAGAATGGAGGTTAGAATTAC
CCTATGCAAATCATAAGAAGGTATTCCTTTACCTTGAATGC
Protein sequenceShow/hide protein sequence
MSGNRIAHTFLHRARLRATSSSISSVERPSSAAFCAESRSFRSSCSSSSRHVDFHRQHAFALSPTAILLLFSTNSTKHFEDEVKEQIPLQYEKDEGGETTDGWEDDDDME
PEIGDGGGGGGVVLQGVPWGEHVLSLAHEVLLQFGDDIKLYSFKTTPRGYIYVRLDKLSNEFGCPSLEDLESYTQEYKKRLDATGALGKIPDDLALEVSSPGAERLLKVP
DDLFRFKAMPMQVSYLEDIVPGGTENDGVFILDHVETESKSCVWKLANVRENRDPLSKGRPLTRKQKEWRLELPYANHKKVFLYLEC