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MS015256 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015256
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold2:2100571..2102060
RNA-Seq ExpressionMS015256
SyntenyMS015256
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034486.1 putative root meristem growth factor 8 [Cucumis melo var. makuwa]5.9e-1651.15Show/hide
Query:  MGLIVMASLCCVSLLILLIPYASSHALEQSFHLQ---GVYPSLFFFFFFFLSLRIMIYLEYEFYEKGELKQLQFTGQPYK---REQKGMNLSRRKGRKWL
        MGLIVMA LCCVS+LILLIP ASSHAL+QS  LQ    V+         F  L+    L+     +G     Q           E+KGM L++RKGRK +
Subjt:  MGLIVMASLCCVSLLILLIPYASSHALEQSFHLQ---GVYPSLFFFFFFFLSLRIMIYLEYEFYEKGELKQLQFTGQPYK---REQKGMNLSRRKGRKWL

Query:  DVADMSSRFFTMDYVHTRRRRPVHNMSRQRP
        +VADMSS+ FTMDY H +RRRPVHNMS  RP
Subjt:  DVADMSSRFFTMDYVHTRRRRPVHNMSRQRP

XP_022149067.1 uncharacterized protein LOC111017571 [Momordica charantia]4.5e-3267.39Show/hide
Query:  MGLIVMASLCCVSLLILLIPYASSHALEQSFHLQGVYPSLFFFFFFFLSLRIMIYLEYEFYEKGELK-------------QLQFTGQPYKREQKGMNLSR
        MGLIVMASLCCVSLLILLIPYASSHALEQSFHLQ      F     F   R+M        E G +K             +   +GQPYKREQKGMNLSR
Subjt:  MGLIVMASLCCVSLLILLIPYASSHALEQSFHLQGVYPSLFFFFFFFLSLRIMIYLEYEFYEKGELK-------------QLQFTGQPYKREQKGMNLSR

Query:  RKGRKWLDVADMSSRFFTMDYVHTRRRRPVHNMSRQRP
        RKGRKWLDV DMSSRFFTMDYVHTRRRRPVHNMSRQRP
Subjt:  RKGRKWLDVADMSSRFFTMDYVHTRRRRPVHNMSRQRP

XP_022956442.1 uncharacterized protein LOC111458171 [Cucurbita moschata]1.6e-1854.2Show/hide
Query:  MGLIVMASLCCVSLLILLIPYASSHALEQSFHLQGV----YPSLFFFFFFFLSLRIMIYLEYEFY-EKGELKQLQ-FTGQPYKREQKGMNLSRRKGRKWL
        MGLI+MA LCCVSLLIL +P+ASSHAL+QS  LQ       P L     F +     +   + F   K E +Q +  +GQ YKRE+     ++ KGRKW 
Subjt:  MGLIVMASLCCVSLLILLIPYASSHALEQSFHLQGV----YPSLFFFFFFFLSLRIMIYLEYEFY-EKGELKQLQ-FTGQPYKREQKGMNLSRRKGRKWL

Query:  DVADMSSRFFTMDYVHTRRRRPVHNMSRQRP
        +VADMSSRFFTMDY H +RRRPVHNMSRQRP
Subjt:  DVADMSSRFFTMDYVHTRRRRPVHNMSRQRP

XP_022977309.1 uncharacterized protein LOC111477668 [Cucurbita maxima]1.6e-1852.67Show/hide
Query:  MGLIVMASLCCVSLLILLIPYASSHALEQSFHLQ---GVYPSLFFFFFFFLSLRIMIYLEYEFYEKGELKQLQ---FTGQPYKREQKGMNLSRRKGRKWL
        MGLI MA LCCVSLLIL +P+ASSHAL+QS  LQ    V+         F  L     +E   ++  + +  Q    +GQPYKRE+     ++ KGRKW 
Subjt:  MGLIVMASLCCVSLLILLIPYASSHALEQSFHLQ---GVYPSLFFFFFFFLSLRIMIYLEYEFYEKGELKQLQ---FTGQPYKREQKGMNLSRRKGRKWL

Query:  DVADMSSRFFTMDYVHTRRRRPVHNMSRQRP
        +VADMSSRF TMDY H +RRRPVHNMSRQRP
Subjt:  DVADMSSRFFTMDYVHTRRRRPVHNMSRQRP

XP_023525366.1 uncharacterized protein LOC111788986 isoform X1 [Cucurbita pepo subsp. pepo]4.8e-1852.63Show/hide
Query:  MGLIVMASLCCVSLLILLIPYASSHALEQSFHLQGV-----YPSLFFFFFFFLSLRIMIYLEYEFY---EKGELKQLQFTGQPYKREQKGMNLSRRKGRK
        MGLI+MA LCCVSLLIL +P+ASSHAL+QS  LQ        P L     F +     +   + F    ++ ELK+   +GQ YKRE+     ++ KGRK
Subjt:  MGLIVMASLCCVSLLILLIPYASSHALEQSFHLQGV-----YPSLFFFFFFFLSLRIMIYLEYEFY---EKGELKQLQFTGQPYKREQKGMNLSRRKGRK

Query:  WLDVADMSSRFFTMDYVHTRRRRPVHNMSRQRP
        W +V DMSSRFFTMDY H +RRRPVHNMSRQRP
Subjt:  WLDVADMSSRFFTMDYVHTRRRRPVHNMSRQRP

TrEMBL top hitse value%identityAlignment
A0A0A0KWA1 Uncharacterized protein5.7e-1750Show/hide
Query:  MGLIVMASLCCVSLLILLIPYASSHALEQSFHLQ---GVYPSLFF---FFFFFLSLRIMIYLEYEFYEKGELK---QLQFTGQPYKREQKGMNLSRRKGR
        MGLIVMA LCCVS+L+LLIP ASSHAL+QS  LQ   GV+  L     F     + R+   +E + ++  + K   +   +GQ    E++G  L++ KGR
Subjt:  MGLIVMASLCCVSLLILLIPYASSHALEQSFHLQ---GVYPSLFF---FFFFFLSLRIMIYLEYEFYEKGELK---QLQFTGQPYKREQKGMNLSRRKGR

Query:  KWLDVADMSSRFFTMDYVHTRRRRPVHNMSRQRP
        KW+ VADMSS+ FTMDY H +RRRPVHNMS +RP
Subjt:  KWLDVADMSSRFFTMDYVHTRRRRPVHNMSRQRP

A0A5D3CCI7 Putative root meristem growth factor 82.8e-1651.15Show/hide
Query:  MGLIVMASLCCVSLLILLIPYASSHALEQSFHLQ---GVYPSLFFFFFFFLSLRIMIYLEYEFYEKGELKQLQFTGQPYK---REQKGMNLSRRKGRKWL
        MGLIVMA LCCVS+LILLIP ASSHAL+QS  LQ    V+         F  L+    L+     +G     Q           E+KGM L++RKGRK +
Subjt:  MGLIVMASLCCVSLLILLIPYASSHALEQSFHLQ---GVYPSLFFFFFFFLSLRIMIYLEYEFYEKGELKQLQFTGQPYK---REQKGMNLSRRKGRKWL

Query:  DVADMSSRFFTMDYVHTRRRRPVHNMSRQRP
        +VADMSS+ FTMDY H +RRRPVHNMS  RP
Subjt:  DVADMSSRFFTMDYVHTRRRRPVHNMSRQRP

A0A6J1D6T9 uncharacterized protein LOC1110175712.2e-3267.39Show/hide
Query:  MGLIVMASLCCVSLLILLIPYASSHALEQSFHLQGVYPSLFFFFFFFLSLRIMIYLEYEFYEKGELK-------------QLQFTGQPYKREQKGMNLSR
        MGLIVMASLCCVSLLILLIPYASSHALEQSFHLQ      F     F   R+M        E G +K             +   +GQPYKREQKGMNLSR
Subjt:  MGLIVMASLCCVSLLILLIPYASSHALEQSFHLQGVYPSLFFFFFFFLSLRIMIYLEYEFYEKGELK-------------QLQFTGQPYKREQKGMNLSR

Query:  RKGRKWLDVADMSSRFFTMDYVHTRRRRPVHNMSRQRP
        RKGRKWLDV DMSSRFFTMDYVHTRRRRPVHNMSRQRP
Subjt:  RKGRKWLDVADMSSRFFTMDYVHTRRRRPVHNMSRQRP

A0A6J1GWC1 uncharacterized protein LOC1114581718.0e-1954.2Show/hide
Query:  MGLIVMASLCCVSLLILLIPYASSHALEQSFHLQGV----YPSLFFFFFFFLSLRIMIYLEYEFY-EKGELKQLQ-FTGQPYKREQKGMNLSRRKGRKWL
        MGLI+MA LCCVSLLIL +P+ASSHAL+QS  LQ       P L     F +     +   + F   K E +Q +  +GQ YKRE+     ++ KGRKW 
Subjt:  MGLIVMASLCCVSLLILLIPYASSHALEQSFHLQGV----YPSLFFFFFFFLSLRIMIYLEYEFY-EKGELKQLQ-FTGQPYKREQKGMNLSRRKGRKWL

Query:  DVADMSSRFFTMDYVHTRRRRPVHNMSRQRP
        +VADMSSRFFTMDY H +RRRPVHNMSRQRP
Subjt:  DVADMSSRFFTMDYVHTRRRRPVHNMSRQRP

A0A6J1IR14 uncharacterized protein LOC1114776688.0e-1952.67Show/hide
Query:  MGLIVMASLCCVSLLILLIPYASSHALEQSFHLQ---GVYPSLFFFFFFFLSLRIMIYLEYEFYEKGELKQLQ---FTGQPYKREQKGMNLSRRKGRKWL
        MGLI MA LCCVSLLIL +P+ASSHAL+QS  LQ    V+         F  L     +E   ++  + +  Q    +GQPYKRE+     ++ KGRKW 
Subjt:  MGLIVMASLCCVSLLILLIPYASSHALEQSFHLQ---GVYPSLFFFFFFFLSLRIMIYLEYEFYEKGELKQLQ---FTGQPYKREQKGMNLSRRKGRKWL

Query:  DVADMSSRFFTMDYVHTRRRRPVHNMSRQRP
        +VADMSSRF TMDY H +RRRPVHNMSRQRP
Subjt:  DVADMSSRFFTMDYVHTRRRRPVHNMSRQRP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTTGATAGTCATGGCCTCACTGTGCTGTGTTTCTCTCTTAATTCTTTTGATACCTTATGCTTCCTCCCATGCTCTGGAGCAGTCCTTCCACTTGCAAGGTGTATA
TCCTTCTCTCTTTTTCTTCTTCTTCTTTTTTCTCTCTTTGAGAATAATGATTTATTTGGAATATGAGTTTTATGAAAAAGGGGAACTAAAACAACTGCAATTTACAGGCC
AGCCTTATAAAAGGGAGCAAAAGGGAATGAACTTGAGCAGAAGGAAGGGGAGAAAGTGGCTGGATGTAGCCGACATGTCGTCGCGTTTTTTCACAATGGATTACGTTCAC
ACGAGACGACGTCGTCCTGTACATAACATGTCGCGCCAGCGTCCT
mRNA sequenceShow/hide mRNA sequence
ATGGGGTTGATAGTCATGGCCTCACTGTGCTGTGTTTCTCTCTTAATTCTTTTGATACCTTATGCTTCCTCCCATGCTCTGGAGCAGTCCTTCCACTTGCAAGGTGTATA
TCCTTCTCTCTTTTTCTTCTTCTTCTTTTTTCTCTCTTTGAGAATAATGATTTATTTGGAATATGAGTTTTATGAAAAAGGGGAACTAAAACAACTGCAATTTACAGGCC
AGCCTTATAAAAGGGAGCAAAAGGGAATGAACTTGAGCAGAAGGAAGGGGAGAAAGTGGCTGGATGTAGCCGACATGTCGTCGCGTTTTTTCACAATGGATTACGTTCAC
ACGAGACGACGTCGTCCTGTACATAACATGTCGCGCCAGCGTCCT
Protein sequenceShow/hide protein sequence
MGLIVMASLCCVSLLILLIPYASSHALEQSFHLQGVYPSLFFFFFFFLSLRIMIYLEYEFYEKGELKQLQFTGQPYKREQKGMNLSRRKGRKWLDVADMSSRFFTMDYVH
TRRRRPVHNMSRQRP