; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS015270 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015270
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionIleal sodium/bile acid cotransporter, putative
Genome locationscaffold2:2182129..2182497
RNA-Seq ExpressionMS015270
SyntenyMS015270
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EOY01534.1 Ileal sodium/bile acid cotransporter, putative [Theobroma cacao]2.1e-1034.75Show/hide
Query:  EFQSHPRTNRSTNFGEMILSLTFQAAIGLVVSSQIPPS---LSLQIAEVMVVISFGVSFCGVTLRNSFPRFGNKLEKFGSVLTCIIFFLMATAFLPARFC
        E QS+ +     + G+ ILSL+FQ  + L +SS +  +   L + I ++ ++++F  SF G+ LR+S+P+  N +E  GS++  + FF+M + FLP    
Subjt:  EFQSHPRTNRSTNFGEMILSLTFQAAIGLVVSSQIPPS---LSLQIAEVMVVISFGVSFCGVTLRNSFPRFGNKLEKFGSVLTCIIFFLMATAFLPARFC

Query:  WISWPVFALSMAAFSFSL
        W++W   A S+ AF  SL
Subjt:  WISWPVFALSMAAFSFSL

OMO72209.1 hypothetical protein COLO4_27768 [Corchorus olitorius]3.9e-1238.83Show/hide
Query:  EFQSHPRTNRSTNFGEMILSLTFQAAIGLVVS--SQIPPSLSLQIAEVMVVISFGVSFCGVTLRNSFPRFGNKLEKFGSVLTCIIFFLMATAFLPARFCW
        E QS+ +   S N G+ I+SLTFQ  + L +S        LS+QI +V ++++F  SF G+ LRNS+P+    +E  GS+   + FF+M + FLP +F W
Subjt:  EFQSHPRTNRSTNFGEMILSLTFQAAIGLVVS--SQIPPSLSLQIAEVMVVISFGVSFCGVTLRNSFPRFGNKLEKFGSVLTCIIFFLMATAFLPARFCW

Query:  ISW
        ++W
Subjt:  ISW

PQM35508.1 uncharacterized protein Pyn_09459 [Prunus yedoensis var. nudiflora]2.8e-1036.57Show/hide
Query:  LPLYVVN---EFQSHPRTNRSTNFGEMILSLTFQAAIGLVVSS---------QIPPSLSLQIAEVMVVISFGVSFCGVTLRNSFPRFGNKLEKFGSVLTC
        LP+Y+     E QS+ ++    + G+ +L LTFQA +GL ++S           P  L+L I  V +VI+F   F  + L  ++PR  + +EKFGSV   
Subjt:  LPLYVVN---EFQSHPRTNRSTNFGEMILSLTFQAAIGLVVSS---------QIPPSLSLQIAEVMVVISFGVSFCGVTLRNSFPRFGNKLEKFGSVLTC

Query:  IIFFLMATAFLPARFCWISWPVFALSMAAFSFSL
        + FFLM + FL + F WI W   A S+ AF+ +L
Subjt:  IIFFLMATAFLPARFCWISWPVFALSMAAFSFSL

XP_020410427.1 uncharacterized protein LOC109946571 [Prunus persica]6.2e-1035.82Show/hide
Query:  LPLYVVN---EFQSHPRTNRSTNFGEMILSLTFQAAIGLVVSS---------QIPPSLSLQIAEVMVVISFGVSFCGVTLRNSFPRFGNKLEKFGSVLTC
        LP+Y+     E QS+ ++N   + G+ +L LTFQA +GL ++S           P  L+L +  V +VI+F   F  + L  ++PR  + +EK GSV   
Subjt:  LPLYVVN---EFQSHPRTNRSTNFGEMILSLTFQAAIGLVVSS---------QIPPSLSLQIAEVMVVISFGVSFCGVTLRNSFPRFGNKLEKFGSVLTC

Query:  IIFFLMATAFLPARFCWISWPVFALSMAAFSFSL
        + FFLM + FL + F WI W   A S+ AF+ +L
Subjt:  IIFFLMATAFLPARFCWISWPVFALSMAAFSFSL

XP_021293273.1 uncharacterized protein LOC110423379 isoform X1 [Herrania umbratica]8.6e-1234.65Show/hide
Query:  LPLYV-VNEFQSHPRTNR-STNFGEMILSLTFQAAIGLVVSSQIPPS---LSLQIAEVMVVISFGVSFCGVTLRNSFPRFGNKLEKFGSVLTCIIFFLMA
        +PLY+  +E + H    R   + G+ ILSL+FQ  + L  SS +  +   L +   ++ ++++F  SF G+ LR+S+P+  N +E  GS++  + FF+M 
Subjt:  LPLYV-VNEFQSHPRTNR-STNFGEMILSLTFQAAIGLVVSSQIPPS---LSLQIAEVMVVISFGVSFCGVTLRNSFPRFGNKLEKFGSVLTCIIFFLMA

Query:  TAFLPARFCWISWPVFALSMAAFSFSL
        + FLP  F W++W   A S+ AF  SL
Subjt:  TAFLPARFCWISWPVFALSMAAFSFSL

TrEMBL top hitse value%identityAlignment
A0A061EGV0 Ileal sodium/bile acid cotransporter, putative1.0e-1034.75Show/hide
Query:  EFQSHPRTNRSTNFGEMILSLTFQAAIGLVVSSQIPPS---LSLQIAEVMVVISFGVSFCGVTLRNSFPRFGNKLEKFGSVLTCIIFFLMATAFLPARFC
        E QS+ +     + G+ ILSL+FQ  + L +SS +  +   L + I ++ ++++F  SF G+ LR+S+P+  N +E  GS++  + FF+M + FLP    
Subjt:  EFQSHPRTNRSTNFGEMILSLTFQAAIGLVVSSQIPPS---LSLQIAEVMVVISFGVSFCGVTLRNSFPRFGNKLEKFGSVLTCIIFFLMATAFLPARFC

Query:  WISWPVFALSMAAFSFSL
        W++W   A S+ AF  SL
Subjt:  WISWPVFALSMAAFSFSL

A0A1R3HPA4 Uncharacterized protein1.9e-1238.83Show/hide
Query:  EFQSHPRTNRSTNFGEMILSLTFQAAIGLVVS--SQIPPSLSLQIAEVMVVISFGVSFCGVTLRNSFPRFGNKLEKFGSVLTCIIFFLMATAFLPARFCW
        E QS+ +   S N G+ I+SLTFQ  + L +S        LS+QI +V ++++F  SF G+ LRNS+P+    +E  GS+   + FF+M + FLP +F W
Subjt:  EFQSHPRTNRSTNFGEMILSLTFQAAIGLVVS--SQIPPSLSLQIAEVMVVISFGVSFCGVTLRNSFPRFGNKLEKFGSVLTCIIFFLMATAFLPARFCW

Query:  ISW
        ++W
Subjt:  ISW

A0A314UEN6 Uncharacterized protein1.3e-1036.57Show/hide
Query:  LPLYVVN---EFQSHPRTNRSTNFGEMILSLTFQAAIGLVVSS---------QIPPSLSLQIAEVMVVISFGVSFCGVTLRNSFPRFGNKLEKFGSVLTC
        LP+Y+     E QS+ ++    + G+ +L LTFQA +GL ++S           P  L+L I  V +VI+F   F  + L  ++PR  + +EKFGSV   
Subjt:  LPLYVVN---EFQSHPRTNRSTNFGEMILSLTFQAAIGLVVSS---------QIPPSLSLQIAEVMVVISFGVSFCGVTLRNSFPRFGNKLEKFGSVLTC

Query:  IIFFLMATAFLPARFCWISWPVFALSMAAFSFSL
        + FFLM + FL + F WI W   A S+ AF+ +L
Subjt:  IIFFLMATAFLPARFCWISWPVFALSMAAFSFSL

A0A5D2MJL9 Uncharacterized protein6.7e-1038.52Show/hide
Query:  EFQSH---PRTNRSTNFGEMILSLTFQAAIGLVVSSQIPPS----LSLQIAEVMVVISFGVSFCGVTLRNSFPRFGNKLEKFGSVLTCIIFFLMATAFLP
        E QSH   PR N S + G+ I+SLTFQA   L  SS    +      L  +   +V++F  SFCG+ L  S PR  + +    SV+  + FF+M++ FLP
Subjt:  EFQSH---PRTNRSTNFGEMILSLTFQAAIGLVVSSQIPPS----LSLQIAEVMVVISFGVSFCGVTLRNSFPRFGNKLEKFGSVLTCIIFFLMATAFLP

Query:  ARFCWISWPVFALSMAAFSFSL
          F W++W    LS+ AF  SL
Subjt:  ARFCWISWPVFALSMAAFSFSL

A0A6J1B1Z4 uncharacterized protein LOC110423379 isoform X14.2e-1234.65Show/hide
Query:  LPLYV-VNEFQSHPRTNR-STNFGEMILSLTFQAAIGLVVSSQIPPS---LSLQIAEVMVVISFGVSFCGVTLRNSFPRFGNKLEKFGSVLTCIIFFLMA
        +PLY+  +E + H    R   + G+ ILSL+FQ  + L  SS +  +   L +   ++ ++++F  SF G+ LR+S+P+  N +E  GS++  + FF+M 
Subjt:  LPLYV-VNEFQSHPRTNR-STNFGEMILSLTFQAAIGLVVSSQIPPS---LSLQIAEVMVVISFGVSFCGVTLRNSFPRFGNKLEKFGSVLTCIIFFLMA

Query:  TAFLPARFCWISWPVFALSMAAFSFSL
        + FLP  F W++W   A S+ AF  SL
Subjt:  TAFLPARFCWISWPVFALSMAAFSFSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTTCCATTGTACGTCGTTAACGAATTCCAGAGCCATCCAAGGACGAATCGCTCGACGAACTTTGGGGAGATGATCTTGAGTCTTACATTTCAGGCCGCCATTGGATTGGT
CGTTTCTTCACAGATTCCACCTTCTCTGTCCCTACAGATTGCAGAGGTAATGGTGGTGATAAGCTTTGGAGTTTCGTTTTGTGGCGTTACTCTTCGAAATTCCTTTCCGA
GATTCGGAAACAAACTCGAGAAATTTGGTTCGGTTTTAACCTGCATTATCTTCTTCCTAATGGCGACCGCCTTCCTTCCGGCGAGGTTTTGCTGGATAAGTTGGCCGGTG
TTTGCTCTGTCAATGGCGGCCTTCTCATTCTCGCTCTTC
mRNA sequenceShow/hide mRNA sequence
CTTCCATTGTACGTCGTTAACGAATTCCAGAGCCATCCAAGGACGAATCGCTCGACGAACTTTGGGGAGATGATCTTGAGTCTTACATTTCAGGCCGCCATTGGATTGGT
CGTTTCTTCACAGATTCCACCTTCTCTGTCCCTACAGATTGCAGAGGTAATGGTGGTGATAAGCTTTGGAGTTTCGTTTTGTGGCGTTACTCTTCGAAATTCCTTTCCGA
GATTCGGAAACAAACTCGAGAAATTTGGTTCGGTTTTAACCTGCATTATCTTCTTCCTAATGGCGACCGCCTTCCTTCCGGCGAGGTTTTGCTGGATAAGTTGGCCGGTG
TTTGCTCTGTCAATGGCGGCCTTCTCATTCTCGCTCTTC
Protein sequenceShow/hide protein sequence
LPLYVVNEFQSHPRTNRSTNFGEMILSLTFQAAIGLVVSSQIPPSLSLQIAEVMVVISFGVSFCGVTLRNSFPRFGNKLEKFGSVLTCIIFFLMATAFLPARFCWISWPV
FALSMAAFSFSLF