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MS015285 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015285
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein of unknown function (DUF1262)
Genome locationscaffold2:2286778..2287125
RNA-Seq ExpressionMS015285
SyntenyMS015285
Gene Ontology termsNA
InterPro domainsIPR010683 - Protein of unknown function DUF1262


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574031.1 hypothetical protein SDJN03_27918, partial [Cucurbita argyrosperma subsp. sororia]1.0e-2256.03Show/hide
Query:  MYVTRPLSMYRNYYPPSAAPAPEPEGPNTGVLVMDEDEMVDFRCCFGLVNTKYVKRAVEAPPFPQNKMLQLSYSYSTNGGKDNHTDYLRAMLIPVLNQPL
        MYVTRPLS YRN  P +AA   EPEGPNTG+LV+ EDE  + +  FGL+     +R+V+A PFPQN +++L   Y+ N G+    D L A+LIPVLNQP 
Subjt:  MYVTRPLSMYRNYYPPSAAPAPEPEGPNTGVLVMDEDEMVDFRCCFGLVNTKYVKRAVEAPPFPQNKMLQLSYSYSTNGGKDNHTDYLRAMLIPVLNQPL

Query:  SSNQYYVIQSTGKAKG
        SSNQYYVI+S G++KG
Subjt:  SSNQYYVIQSTGKAKG

XP_022149024.1 uncharacterized protein LOC111017544 [Momordica charantia]1.1e-61100Show/hide
Query:  MYVTRPLSMYRNYYPPSAAPAPEPEGPNTGVLVMDEDEMVDFRCCFGLVNTKYVKRAVEAPPFPQNKMLQLSYSYSTNGGKDNHTDYLRAMLIPVLNQPL
        MYVTRPLSMYRNYYPPSAAPAPEPEGPNTGVLVMDEDEMVDFRCCFGLVNTKYVKRAVEAPPFPQNKMLQLSYSYSTNGGKDNHTDYLRAMLIPVLNQPL
Subjt:  MYVTRPLSMYRNYYPPSAAPAPEPEGPNTGVLVMDEDEMVDFRCCFGLVNTKYVKRAVEAPPFPQNKMLQLSYSYSTNGGKDNHTDYLRAMLIPVLNQPL

Query:  SSNQYYVIQSTGKAKG
        SSNQYYVIQSTGKAKG
Subjt:  SSNQYYVIQSTGKAKG

XP_022149086.1 uncharacterized protein LOC111017584 [Momordica charantia]3.1e-2761.02Show/hide
Query:  MYVTRPLSMYRNYYPPSAAPAPEP--EGPNTGVLVMDEDEMVDFRCCFGLVNTKYVKRAVEAPPFPQNKMLQLSYSYSTNGGKDNHTDYLRAMLIPVLNQ
        MYVTRPLSMYRN    SAAP P    EGPNTGVLV+ EDE  + R  FGL+  K VK    APPFPQNK+++L   Y+ N G+  HTDY  A+LIPV+N+
Subjt:  MYVTRPLSMYRNYYPPSAAPAPEP--EGPNTGVLVMDEDEMVDFRCCFGLVNTKYVKRAVEAPPFPQNKMLQLSYSYSTNGGKDNHTDYLRAMLIPVLNQ

Query:  PLSSNQYYVIQSTGKAKG
        PLSSN+YYVI+S GK KG
Subjt:  PLSSNQYYVIQSTGKAKG

XP_023542039.1 uncharacterized protein LOC111802013 [Cucurbita pepo subsp. pepo]7.8e-2356.9Show/hide
Query:  MYVTRPLSMYRNYYPPSAAPAPEPEGPNTGVLVMDEDEMVDFRCCFGLVNTKYVKRAVEAPPFPQNKMLQLSYSYSTNGGKDNHTDYLRAMLIPVLNQPL
        MYVTRPLS YRN  P +AA   EPEGPNTGVLV+ EDE  + +  FGL+     +R+V+A PFPQN +++L   Y+ N G+    D L A+LIPVLNQP 
Subjt:  MYVTRPLSMYRNYYPPSAAPAPEPEGPNTGVLVMDEDEMVDFRCCFGLVNTKYVKRAVEAPPFPQNKMLQLSYSYSTNGGKDNHTDYLRAMLIPVLNQPL

Query:  SSNQYYVIQSTGKAKG
        SSNQYYVI+S G++KG
Subjt:  SSNQYYVIQSTGKAKG

XP_038893050.1 uncharacterized protein LOC120081938 [Benincasa hispida]1.0e-2254.17Show/hide
Query:  MYVTRPLSMYRNYYPPSAAPAPEPEGPNTGVLVMDEDEMVDFRCCFGLVNTKYVKRAVEAPPFPQNKMLQLSYSYSTNGGKDNH----TDYLRAMLIPVL
        MYVTRPLS+YR+    S++ A EPEGPNTGVLV+ EDE  + R  FGL+       +V  PPFPQNK+L+L Y   +      H    TDY  A LIPVL
Subjt:  MYVTRPLSMYRNYYPPSAAPAPEPEGPNTGVLVMDEDEMVDFRCCFGLVNTKYVKRAVEAPPFPQNKMLQLSYSYSTNGGKDNH----TDYLRAMLIPVL

Query:  NQPLSSNQYYVIQSTGKAKG
        NQP +SNQYY+I S GK KG
Subjt:  NQPLSSNQYYVIQSTGKAKG

TrEMBL top hitse value%identityAlignment
A0A2P5B6V0 Uncharacterized protein8.4e-2355.93Show/hide
Query:  MYVTRPLSMYRNYYPPSAAPAPEPEGPNTGVLVMDEDEMVDFRCCFGLVNTKYVKRAVEAPPFPQNKMLQLSYSYSTNGGKDNHTDYLR--AMLIPVLNQ
        MYVTRPLSMY+ Y  PSA   P PEGPN+G+LV+ +DE  + R  FGL     +K      PFPQNK L+L YSYST  G+++H    R  A  IPVLNQ
Subjt:  MYVTRPLSMYRNYYPPSAAPAPEPEGPNTGVLVMDEDEMVDFRCCFGLVNTKYVKRAVEAPPFPQNKMLQLSYSYSTNGGKDNHTDYLR--AMLIPVLNQ

Query:  PLSSNQYYVIQSTGKAKG
        PLSSN+YYVI+S G  KG
Subjt:  PLSSNQYYVIQSTGKAKG

A0A6J1D5S8 uncharacterized protein LOC1110175445.4e-62100Show/hide
Query:  MYVTRPLSMYRNYYPPSAAPAPEPEGPNTGVLVMDEDEMVDFRCCFGLVNTKYVKRAVEAPPFPQNKMLQLSYSYSTNGGKDNHTDYLRAMLIPVLNQPL
        MYVTRPLSMYRNYYPPSAAPAPEPEGPNTGVLVMDEDEMVDFRCCFGLVNTKYVKRAVEAPPFPQNKMLQLSYSYSTNGGKDNHTDYLRAMLIPVLNQPL
Subjt:  MYVTRPLSMYRNYYPPSAAPAPEPEGPNTGVLVMDEDEMVDFRCCFGLVNTKYVKRAVEAPPFPQNKMLQLSYSYSTNGGKDNHTDYLRAMLIPVLNQPL

Query:  SSNQYYVIQSTGKAKG
        SSNQYYVIQSTGKAKG
Subjt:  SSNQYYVIQSTGKAKG

A0A6J1D7B1 uncharacterized protein LOC1110175841.5e-2761.02Show/hide
Query:  MYVTRPLSMYRNYYPPSAAPAPEP--EGPNTGVLVMDEDEMVDFRCCFGLVNTKYVKRAVEAPPFPQNKMLQLSYSYSTNGGKDNHTDYLRAMLIPVLNQ
        MYVTRPLSMYRN    SAAP P    EGPNTGVLV+ EDE  + R  FGL+  K VK    APPFPQNK+++L   Y+ N G+  HTDY  A+LIPV+N+
Subjt:  MYVTRPLSMYRNYYPPSAAPAPEP--EGPNTGVLVMDEDEMVDFRCCFGLVNTKYVKRAVEAPPFPQNKMLQLSYSYSTNGGKDNHTDYLRAMLIPVLNQ

Query:  PLSSNQYYVIQSTGKAKG
        PLSSN+YYVI+S GK KG
Subjt:  PLSSNQYYVIQSTGKAKG

A0A6J1HWZ9 uncharacterized protein LOC1114676216.5e-2356.03Show/hide
Query:  MYVTRPLSMYRNYYPPSAAPAPEPEGPNTGVLVMDEDEMVDFRCCFGLVNTKYVKRAVEAPPFPQNKMLQLSYSYSTNGGKDNHTDYLRAMLIPVLNQPL
        MYVTRPLS YRN   P+AA   EPEGPNTGVLV+ +DE  + +  FGL+     +R+V+  PFPQN +++L   Y+ N G+    D L A+LIPVLNQPL
Subjt:  MYVTRPLSMYRNYYPPSAAPAPEPEGPNTGVLVMDEDEMVDFRCCFGLVNTKYVKRAVEAPPFPQNKMLQLSYSYSTNGGKDNHTDYLRAMLIPVLNQPL

Query:  SSNQYYVIQSTGKAKG
        SSNQYYVI+S G++KG
Subjt:  SSNQYYVIQSTGKAKG

W9QWK1 Uncharacterized protein1.1e-2255.08Show/hide
Query:  MYVTRPLSMYRNYYPPSAAPAPEPEGPNTGVLVMDEDEMVDFRCCFGLVNTKYVKRAVEAPPFPQNKMLQLSYSYSTNGGKDN--HTDYLRAMLIPVLNQ
        MYVTRPLSMY+ Y  PSA   P PEGPNTG+LV+ +DE  + R  FGL     +K      PFPQNK L+L YSYST  G+++  H  +  A  IPVLNQ
Subjt:  MYVTRPLSMYRNYYPPSAAPAPEPEGPNTGVLVMDEDEMVDFRCCFGLVNTKYVKRAVEAPPFPQNKMLQLSYSYSTNGGKDN--HTDYLRAMLIPVLNQ

Query:  PLSSNQYYVIQSTGKAKG
        PLSSN+YY+IQ  G  KG
Subjt:  PLSSNQYYVIQSTGKAKG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G13480.1 Protein of unknown function (DUF1262)2.4e-1743.1Show/hide
Query:  MYVTRPLSMYRNYYPPSAAPAPEPEGPNTGVLVMDEDEMVDFRCCFGLVNTKYVKRAVEAPPFPQNKMLQLSYSYSTNGGKDNHTDYLRAMLIPVLNQPL
        MYVTR LS Y+    PS      PEGPN+G++V+ +DE     CCFG       +  ++  PFPQN  ++L+ +Y++ GG+   T     + IPVL+QPL
Subjt:  MYVTRPLSMYRNYYPPSAAPAPEPEGPNTGVLVMDEDEMVDFRCCFGLVNTKYVKRAVEAPPFPQNKMLQLSYSYSTNGGKDNHTDYLRAMLIPVLNQPL

Query:  SSNQYYVIQSTGKAKG
        SSN YYV+Q  GK  G
Subjt:  SSNQYYVIQSTGKAKG

AT1G13510.1 Protein of unknown function (DUF1262)8.4e-1542.24Show/hide
Query:  MYVTRPLSMYRNYYPPSAAPAPEPEGPNTGVLVMDEDEMVDFRCCFGLVNTKYVKRAVEAPPFPQNKMLQLSYSYSTNGGKDNHTDYLRAMLIPVLNQPL
        MYVTR LS Y+    P+    P PEGPN+G+LV+ +       CCFGL     V   +   P PQN  L   +    N G+D+ T     + IPVLN+PL
Subjt:  MYVTRPLSMYRNYYPPSAAPAPEPEGPNTGVLVMDEDEMVDFRCCFGLVNTKYVKRAVEAPPFPQNKMLQLSYSYSTNGGKDNHTDYLRAMLIPVLNQPL

Query:  SSNQYYVIQSTGKAKG
        SSN YY I+  GK  G
Subjt:  SSNQYYVIQSTGKAKG

AT1G13520.1 Protein of unknown function (DUF1262)4.9e-1541.38Show/hide
Query:  MYVTRPLSMYRNYYPPSAAPAPEPEGPNTGVLVMDEDEMVDFRCCFGLVNTKYVKRAVEAPPFPQNKMLQLSYSYSTNGGKDNHTDYLRAMLIPVLNQPL
        MYVTR LS Y+     S      PEGPN+GVLV+ ++E     CCFG          ++  PFPQN   +L+ +Y T  G D  + + + + IPVL+QP 
Subjt:  MYVTRPLSMYRNYYPPSAAPAPEPEGPNTGVLVMDEDEMVDFRCCFGLVNTKYVKRAVEAPPFPQNKMLQLSYSYSTNGGKDNHTDYLRAMLIPVLNQPL

Query:  SSNQYYVIQSTGKAKG
         SN+YYVI+  GK  G
Subjt:  SSNQYYVIQSTGKAKG

AT1G13550.1 Protein of unknown function (DUF1262)4.0e-1744.64Show/hide
Query:  MYVTRPLSMYRNYYPPSAAPAPEPEGPNTGVLVMDEDEMVDFRCCFGLVNTKYVKRAVEAPPFPQNKMLQLSYSYSTNGGKDNHTDYLRAMLIPVLNQPL
        MYVTR LS YR    PS    P PEGPN+GVLV+ ++E +   CCFGL N  +++      PFPQN  L +      +GG++N       + IPVL QPL
Subjt:  MYVTRPLSMYRNYYPPSAAPAPEPEGPNTGVLVMDEDEMVDFRCCFGLVNTKYVKRAVEAPPFPQNKMLQLSYSYSTNGGKDNHTDYLRAMLIPVLNQPL

Query:  SSNQYYVIQSTG
        SSN+YY  +  G
Subjt:  SSNQYYVIQSTG

AT1G61600.1 Protein of unknown function (DUF1262)4.9e-1538.46Show/hide
Query:  MYVTRPLSMYRNYYPPSAAPAPEPEGPNTGVLVM-DEDEMVDFRCCFGLVNTKYVKRAVEAPPFPQNKMLQLSYSYSTNGGKDNHTDYLRAMLIPVLNQP
        MYVTR LS +R Y          PEGP +GVLV+ DE+   +   CFG+      +  +E  P PQ+K+L + +  S+    +  T   + + IP L+QP
Subjt:  MYVTRPLSMYRNYYPPSAAPAPEPEGPNTGVLVM-DEDEMVDFRCCFGLVNTKYVKRAVEAPPFPQNKMLQLSYSYSTNGGKDNHTDYLRAMLIPVLNQP

Query:  LSSNQYYVIQSTGKAKG
        LSSN+YYV+ + G+ KG
Subjt:  LSSNQYYVIQSTGKAKG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACGTAACGAGGCCTCTTTCTATGTACAGAAATTACTACCCTCCTTCGGCGGCGCCGGCGCCGGAGCCGGAGGGCCCAAACACAGGGGTTCTGGTGATGGACGAAGA
TGAAATGGTGGATTTCAGATGCTGTTTTGGATTGGTTAACACAAAGTATGTGAAGAGGGCGGTGGAGGCGCCGCCGTTCCCTCAGAACAAGATGCTGCAGCTTTCCTATT
CGTATTCCACAAATGGAGGCAAGGACAATCACACAGATTACTTACGCGCAATGCTGATTCCCGTTCTCAATCAGCCTTTGTCTTCCAACCAATATTATGTCATCCAATCC
ACTGGCAAAGCAAAAGGG
mRNA sequenceShow/hide mRNA sequence
ATGTACGTAACGAGGCCTCTTTCTATGTACAGAAATTACTACCCTCCTTCGGCGGCGCCGGCGCCGGAGCCGGAGGGCCCAAACACAGGGGTTCTGGTGATGGACGAAGA
TGAAATGGTGGATTTCAGATGCTGTTTTGGATTGGTTAACACAAAGTATGTGAAGAGGGCGGTGGAGGCGCCGCCGTTCCCTCAGAACAAGATGCTGCAGCTTTCCTATT
CGTATTCCACAAATGGAGGCAAGGACAATCACACAGATTACTTACGCGCAATGCTGATTCCCGTTCTCAATCAGCCTTTGTCTTCCAACCAATATTATGTCATCCAATCC
ACTGGCAAAGCAAAAGGG
Protein sequenceShow/hide protein sequence
MYVTRPLSMYRNYYPPSAAPAPEPEGPNTGVLVMDEDEMVDFRCCFGLVNTKYVKRAVEAPPFPQNKMLQLSYSYSTNGGKDNHTDYLRAMLIPVLNQPLSSNQYYVIQS
TGKAKG