; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS015296 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015296
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNudix hydrolase
Genome locationscaffold2:2390652..2391254
RNA-Seq ExpressionMS015296
SyntenyMS015296
Gene Ontology termsGO:0006203 - dGTP catabolic process (biological process)
GO:0005829 - cytosol (cellular component)
GO:0035539 - 8-oxo-7,8-dihydrodeoxyguanosine triphosphate pyrophosphatase activity (molecular function)
InterPro domainsIPR000086 - NUDIX hydrolase domain
IPR015797 - NUDIX hydrolase-like domain superfamily
IPR020084 - NUDIX hydrolase, conserved site
IPR020476 - NUDIX hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004135122.1 geranyl diphosphate phosphohydrolase [Cucumis sativus]3.8e-6685.51Show/hide
Query:  TPTPQVAVAICLLKGNRVLMGRRLVTIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEKIEFLKVTNNLFLEQPRPAHYVVVFVRAVLADPNQTPQ
        +P+PQVAVAICLLK  R+LMGRRLV+IGNSKYSLPSGHLEFGENFEECA RE+KEETGLDIEKIEFLKVTNNLF++QP+PAHYVVVFVRAVL DP QTP 
Subjt:  TPTPQVAVAICLLKGNRVLMGRRLVTIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEKIEFLKVTNNLFLEQPRPAHYVVVFVRAVLADPNQTPQ

Query:  NLEPEKCEGWDWYEWQNLPHPLFGPIKNMVVDGFSPFP
        NLEPEKC+GWDWYEW  LPHPLFGPIK MV DGF+PFP
Subjt:  NLEPEKCEGWDWYEWQNLPHPLFGPIKNMVVDGFSPFP

XP_008446534.1 PREDICTED: nudix hydrolase 1-like [Cucumis melo]4.4e-6774.12Show/hide
Query:  VVRSSNMVSVAEPQHTINGNAKKEEAAISPPPTPTPQVAVAICLLKGNRVLMGRRLVTIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEKIEFLK
        ++ SSNMVS AE  ++       E+  ++ P  P+PQVAVAICLL+  R+LMGRRLV+IGNSKYSLPSGHLEFGENFEECA RE+KEETGLDI KIEFLK
Subjt:  VVRSSNMVSVAEPQHTINGNAKKEEAAISPPPTPTPQVAVAICLLKGNRVLMGRRLVTIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEKIEFLK

Query:  VTNNLFLEQPRPAHYVVVFVRAVLADPNQTPQNLEPEKCEGWDWYEWQNLPHPLFGPIKNMVVDGFSPFP
        VTNNLF++QP+PAHYVVVFVRAVL DP QTP NLEPEKC+GWDWYEW NLP PLFGPIK MV+DGF+PFP
Subjt:  VTNNLFLEQPRPAHYVVVFVRAVLADPNQTPQNLEPEKCEGWDWYEWQNLPHPLFGPIKNMVVDGFSPFP

XP_022149108.1 geranyl diphosphate phosphohydrolase [Momordica charantia]1.1e-8998.79Show/hide
Query:  MVS-VAEPQHTINGNAKKEEAAISPPPTPTPQVAVAICLLKGNRVLMGRRLVTIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEKIEFLKVTNNL
        MVS VAEPQHTINGNAKKEEAAISPPPTPTPQVAVAICLLKGNRVLMGRRLVTIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEKIEFLKVTNNL
Subjt:  MVS-VAEPQHTINGNAKKEEAAISPPPTPTPQVAVAICLLKGNRVLMGRRLVTIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEKIEFLKVTNNL

Query:  FLEQPRPAHYVVVFVRAVLADPNQTPQNLEPEKCEGWDWYEWQNLPHPLFGPIKNMVVDGFSPFP
        FLEQPRPAHYVVVFVRAVLADPNQTPQNLEPEKCEGWDWYEWQNLPHPLFGPIKNMVVDGF+PFP
Subjt:  FLEQPRPAHYVVVFVRAVLADPNQTPQNLEPEKCEGWDWYEWQNLPHPLFGPIKNMVVDGFSPFP

XP_023541815.1 geranyl diphosphate phosphohydrolase-like [Cucurbita pepo subsp. pepo]6.4e-6678.88Show/hide
Query:  VAEPQHTINGNAKKEEAAISPPPTPTPQVAVAICLLKGNRVLMGRRLVTIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEKIEFLKVTNNLFLEQ
        V+E Q  ING  K +   ++PP  P+PQVAVAICLL+G  VLMGRRLV+IGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEK+EFLKVTNNLFL+Q
Subjt:  VAEPQHTINGNAKKEEAAISPPPTPTPQVAVAICLLKGNRVLMGRRLVTIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEKIEFLKVTNNLFLEQ

Query:  PRPAHYVVVFVRAVLADPNQTPQNLEPEKCEGWDWYEWQNLPHPLFGPIKNMVVDGFSPFP
        P PAHYVVVFVRAVLADP QTP NLEP+KC GWDWYEW +LP PLFGPIK MV++GF+PFP
Subjt:  PRPAHYVVVFVRAVLADPNQTPQNLEPEKCEGWDWYEWQNLPHPLFGPIKNMVVDGFSPFP

XP_038892917.1 geranyl diphosphate phosphohydrolase [Benincasa hispida]6.2e-6979.17Show/hide
Query:  MVSVAEPQHTINGN----AKKEEAAISPPPTPTPQVAVAICLLKGNRVLMGRRLVTIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEKIEFLKVT
        MVS AE     NG+    AK+++AA +    PTPQVAVAICLL+G R+LMGRRLV+IGNSKYSLPSGHLEFGENFEECAARE+KEETGLDIEKIEFLKVT
Subjt:  MVSVAEPQHTINGN----AKKEEAAISPPPTPTPQVAVAICLLKGNRVLMGRRLVTIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEKIEFLKVT

Query:  NNLFLEQPRPAHYVVVFVRAVLADPNQTPQNLEPEKCEGWDWYEWQNLPHPLFGPIKNMVVDGFSPFP
        NNLFL+QPR AHYVVVFVRAVLADP QTP NLEPEKC+GWDWYEW NLP PLFGPIK MV+DGF+PFP
Subjt:  NNLFLEQPRPAHYVVVFVRAVLADPNQTPQNLEPEKCEGWDWYEWQNLPHPLFGPIKNMVVDGFSPFP

TrEMBL top hitse value%identityAlignment
A0A0A0KR28 Nudix hydrolase domain-containing protein1.8e-6685.51Show/hide
Query:  TPTPQVAVAICLLKGNRVLMGRRLVTIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEKIEFLKVTNNLFLEQPRPAHYVVVFVRAVLADPNQTPQ
        +P+PQVAVAICLLK  R+LMGRRLV+IGNSKYSLPSGHLEFGENFEECA RE+KEETGLDIEKIEFLKVTNNLF++QP+PAHYVVVFVRAVL DP QTP 
Subjt:  TPTPQVAVAICLLKGNRVLMGRRLVTIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEKIEFLKVTNNLFLEQPRPAHYVVVFVRAVLADPNQTPQ

Query:  NLEPEKCEGWDWYEWQNLPHPLFGPIKNMVVDGFSPFP
        NLEPEKC+GWDWYEW  LPHPLFGPIK MV DGF+PFP
Subjt:  NLEPEKCEGWDWYEWQNLPHPLFGPIKNMVVDGFSPFP

A0A1S3BFY2 nudix hydrolase 1-like2.2e-6774.12Show/hide
Query:  VVRSSNMVSVAEPQHTINGNAKKEEAAISPPPTPTPQVAVAICLLKGNRVLMGRRLVTIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEKIEFLK
        ++ SSNMVS AE  ++       E+  ++ P  P+PQVAVAICLL+  R+LMGRRLV+IGNSKYSLPSGHLEFGENFEECA RE+KEETGLDI KIEFLK
Subjt:  VVRSSNMVSVAEPQHTINGNAKKEEAAISPPPTPTPQVAVAICLLKGNRVLMGRRLVTIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEKIEFLK

Query:  VTNNLFLEQPRPAHYVVVFVRAVLADPNQTPQNLEPEKCEGWDWYEWQNLPHPLFGPIKNMVVDGFSPFP
        VTNNLF++QP+PAHYVVVFVRAVL DP QTP NLEPEKC+GWDWYEW NLP PLFGPIK MV+DGF+PFP
Subjt:  VTNNLFLEQPRPAHYVVVFVRAVLADPNQTPQNLEPEKCEGWDWYEWQNLPHPLFGPIKNMVVDGFSPFP

A0A5D3CCL5 Nudix hydrolase 1-like6.9e-6675Show/hide
Query:  MVSVAEPQHTINGNAKKEEAAISPPPTPTPQVAVAICLLKGNRVLMGRRLVTIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEKIEFLKVTNNLF
        MVS AE  ++       E+  ++ P  P+PQVAVAICLL+  R+LMGRRLV+IGNSKYSLPSGHLEFGENFEECA RE+KEETGLDI KIEFLKVTNNLF
Subjt:  MVSVAEPQHTINGNAKKEEAAISPPPTPTPQVAVAICLLKGNRVLMGRRLVTIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEKIEFLKVTNNLF

Query:  LEQPRPAHYVVVFVRAVLADPNQTPQNLEPEKCEGWDWYEWQNLPHPLFGPIKNMVVDGFSPFP
        ++QP+PAHYVVVFVRAVL DP QTP NLEPEKC+GWDWYEW NLP PLFGPIK MV+DGF+PFP
Subjt:  LEQPRPAHYVVVFVRAVLADPNQTPQNLEPEKCEGWDWYEWQNLPHPLFGPIKNMVVDGFSPFP

A0A6J1D5X4 geranyl diphosphate phosphohydrolase5.3e-9098.79Show/hide
Query:  MVS-VAEPQHTINGNAKKEEAAISPPPTPTPQVAVAICLLKGNRVLMGRRLVTIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEKIEFLKVTNNL
        MVS VAEPQHTINGNAKKEEAAISPPPTPTPQVAVAICLLKGNRVLMGRRLVTIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEKIEFLKVTNNL
Subjt:  MVS-VAEPQHTINGNAKKEEAAISPPPTPTPQVAVAICLLKGNRVLMGRRLVTIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEKIEFLKVTNNL

Query:  FLEQPRPAHYVVVFVRAVLADPNQTPQNLEPEKCEGWDWYEWQNLPHPLFGPIKNMVVDGFSPFP
        FLEQPRPAHYVVVFVRAVLADPNQTPQNLEPEKCEGWDWYEWQNLPHPLFGPIKNMVVDGF+PFP
Subjt:  FLEQPRPAHYVVVFVRAVLADPNQTPQNLEPEKCEGWDWYEWQNLPHPLFGPIKNMVVDGFSPFP

A0A6J1HTH5 geranyl diphosphate phosphohydrolase-like1.3e-6479.22Show/hide
Query:  INGNAKKEEAAISPPPTPTPQVAVAICLLKGNRVLMGRRLVTIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEKIEFLKVTNNLFLEQPRPAHYV
        ING  K +   ++PP  P+PQVAVAICLL+G  VLMGRRLV+IGNSKYSLPSGHLEFGE FEECAAREMKEETGLDIEK+EFLKVTNNLFL+QP PAHYV
Subjt:  INGNAKKEEAAISPPPTPTPQVAVAICLLKGNRVLMGRRLVTIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEKIEFLKVTNNLFLEQPRPAHYV

Query:  VVFVRAVLADPNQTPQNLEPEKCEGWDWYEWQNLPHPLFGPIKNMVVDGFSPFP
        VVFVRAVLA P QTP NLEP+KC GWDWYEW +LP PLFGPIK MV++GF+PFP
Subjt:  VVFVRAVLADPNQTPQNLEPEKCEGWDWYEWQNLPHPLFGPIKNMVVDGFSPFP

SwissProt top hitse value%identityAlignment
A4VLQ5 NAD-capped RNA hydrolase NudC2.3e-0526.57Show/hide
Query:  SVAEPQHTINGNAKKEEAAISPPPTPTPQVAVAICLLKGNRVLMGRRLVTIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEKIEFLKVTNNLFLE
        S   P H   G       A      P    ++ + + +G+ +L+ R         YS  +G++E GE+ E+C ARE++EE G+DI   +++      F  
Subjt:  SVAEPQHTINGNAKKEEAAISPPPTPTPQVAVAICLLKGNRVLMGRRLVTIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEKIEFLKVTNNLFLE

Query:  QPRPAHYVVVFVRAVLADPNQTPQNLEPEKCEGWDWYEWQNLP
             H +++   A  A     PQ   PE+ E   W+   NLP
Subjt:  QPRPAHYVVVFVRAVLADPNQTPQNLEPEKCEGWDWYEWQNLP

M4I1C6 Geranyl diphosphate phosphohydrolase3.8e-5368.66Show/hide
Query:  QVAVAICLLKGNRVLMGRRLVTIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEKIEFLKVTNNLFLEQPRPAHYVVVFVRAVLADPNQTPQNLEP
        +VAV +CLL+G  VL+GRR  ++G+S +SLPSGHLEFGE+FEECAARE+KEET LDI KIE L VTNNLFL++ +P+ YV VF+RAVLADP Q PQN+EP
Subjt:  QVAVAICLLKGNRVLMGRRLVTIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEKIEFLKVTNNLFLEQPRPAHYVVVFVRAVLADPNQTPQNLEP

Query:  EKCEGWDWYEWQNLPHPLFGPIKNMVVDGFSPFP
        E C+GW WYEW NLP PLF P+ N+V DGF+PFP
Subjt:  EKCEGWDWYEWQNLPHPLFGPIKNMVVDGFSPFP

Q8BG93 Nucleotide triphosphate diphosphatase NUDT153.2e-2036.91Show/hide
Query:  AISPPPTPTPQVAVAICLLKGNR---VLMGRRLVTIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEKIEFLKVTNNLFLEQPRPAHYVVVFVRA-
        A +  P   P V V + +L       VL+G+R  + G   + LP GHLEFGE +EECA RE  EE GL ++ + F  V N+ F+E+    HYV + ++  
Subjt:  AISPPPTPTPQVAVAICLLKGNR---VLMGRRLVTIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEKIEFLKVTNNLFLEQPRPAHYVVVFVRA-

Query:  VLADPNQTPQNLEPEKCEGWDWYEWQNLP--HPLFGPIKNMVVDGFSPF
        V    +  P+N+EPEK E W+W  W+  P    LF  ++ +   G+ PF
Subjt:  VLADPNQTPQNLEPEKCEGWDWYEWQNLP--HPLFGPIKNMVVDGFSPF

Q9CA40 Nudix hydrolase 15.1e-5063.43Show/hide
Query:  PQVAVAICLLKGNRVLMGRRLVTIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEKIEFLKVTNNLFLEQPRPAHYVVVFVRAVLADPNQTPQNLE
        P+VAV + +L GN +L+GRR  +IGNS ++LP GHLEFGE+FEECAARE+ EETGL IEK++ L VTNN+F E P P+HYV V +RAVL DP+Q P+N+E
Subjt:  PQVAVAICLLKGNRVLMGRRLVTIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEKIEFLKVTNNLFLEQPRPAHYVVVFVRAVLADPNQTPQNLE

Query:  PEKCEGWDWYEWQNLPHPLFGPIKNMVVDGFSPF
        PEKCEGWDWY+W+NLP PLF P++ +   GF+PF
Subjt:  PEKCEGWDWYEWQNLPHPLFGPIKNMVVDGFSPF

Q9NV35 Nucleotide triphosphate diphosphatase NUDT151.9e-2038.57Show/hide
Query:  PTPQVAVAICLLKGNR-VLMGRRLVTIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEKIEFLKVTNNLFLEQPRPAHYVVVFVRA-VLADPNQTP
        P   V V +   K  R VL+G+R  ++G   + LP GHLEFGE +EECA RE  EE  L ++ + F  V N+ F+E+    HYV + ++  V    +  P
Subjt:  PTPQVAVAICLLKGNR-VLMGRRLVTIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEKIEFLKVTNNLFLEQPRPAHYVVVFVRA-VLADPNQTP

Query:  QNLEPEKCEGWDWYEWQNLP--HPLFGPIKNMVVDGFSPF
        +N+EPEK E W+W  W+ LP    LF  ++ +   G+ PF
Subjt:  QNLEPEKCEGWDWYEWQNLP--HPLFGPIKNMVVDGFSPF

Arabidopsis top hitse value%identityAlignment
AT1G68760.1 nudix hydrolase 13.6e-5163.43Show/hide
Query:  PQVAVAICLLKGNRVLMGRRLVTIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEKIEFLKVTNNLFLEQPRPAHYVVVFVRAVLADPNQTPQNLE
        P+VAV + +L GN +L+GRR  +IGNS ++LP GHLEFGE+FEECAARE+ EETGL IEK++ L VTNN+F E P P+HYV V +RAVL DP+Q P+N+E
Subjt:  PQVAVAICLLKGNRVLMGRRLVTIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEKIEFLKVTNNLFLEQPRPAHYVVVFVRAVLADPNQTPQNLE

Query:  PEKCEGWDWYEWQNLPHPLFGPIKNMVVDGFSPF
        PEKCEGWDWY+W+NLP PLF P++ +   GF+PF
Subjt:  PEKCEGWDWYEWQNLPHPLFGPIKNMVVDGFSPF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTTGTAAGATCTTCAAATATGGTGTCCGTCGCTGAGCCGCAACACACAATTAATGGAAATGCGAAGAAAGAAGAAGCAGCAATATCGCCACCGCCAACGCCAACGCCGCA
GGTAGCAGTCGCGATCTGCTTGTTAAAAGGGAATCGCGTGCTAATGGGGCGCCGCCTCGTGACCATTGGGAACTCCAAATATTCCCTCCCAAGTGGCCATCTCGAATTTG
GGGAGAATTTCGAAGAATGCGCTGCGAGAGAGATGAAAGAGGAGACGGGGCTGGATATCGAGAAGATTGAGTTTCTAAAAGTGACCAATAATCTGTTTCTGGAGCAGCCA
AGGCCTGCGCATTATGTGGTTGTGTTCGTGCGAGCAGTCTTGGCAGATCCGAACCAAACTCCACAGAATTTGGAGCCGGAGAAATGCGAGGGATGGGATTGGTATGAATG
GCAAAATTTGCCGCACCCACTTTTTGGTCCCATTAAAAATATGGTCGTTGATGGCTTTAGTCCCTTCCCA
mRNA sequenceShow/hide mRNA sequence
GTTGTAAGATCTTCAAATATGGTGTCCGTCGCTGAGCCGCAACACACAATTAATGGAAATGCGAAGAAAGAAGAAGCAGCAATATCGCCACCGCCAACGCCAACGCCGCA
GGTAGCAGTCGCGATCTGCTTGTTAAAAGGGAATCGCGTGCTAATGGGGCGCCGCCTCGTGACCATTGGGAACTCCAAATATTCCCTCCCAAGTGGCCATCTCGAATTTG
GGGAGAATTTCGAAGAATGCGCTGCGAGAGAGATGAAAGAGGAGACGGGGCTGGATATCGAGAAGATTGAGTTTCTAAAAGTGACCAATAATCTGTTTCTGGAGCAGCCA
AGGCCTGCGCATTATGTGGTTGTGTTCGTGCGAGCAGTCTTGGCAGATCCGAACCAAACTCCACAGAATTTGGAGCCGGAGAAATGCGAGGGATGGGATTGGTATGAATG
GCAAAATTTGCCGCACCCACTTTTTGGTCCCATTAAAAATATGGTCGTTGATGGCTTTAGTCCCTTCCCA
Protein sequenceShow/hide protein sequence
VVRSSNMVSVAEPQHTINGNAKKEEAAISPPPTPTPQVAVAICLLKGNRVLMGRRLVTIGNSKYSLPSGHLEFGENFEECAAREMKEETGLDIEKIEFLKVTNNLFLEQP
RPAHYVVVFVRAVLADPNQTPQNLEPEKCEGWDWYEWQNLPHPLFGPIKNMVVDGFSPFP