; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS015298 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015298
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptioninflorescence deficient in abscission (IDA)-like 2
Genome locationscaffold2:2400490..2400756
RNA-Seq ExpressionMS015298
SyntenyMS015298
Gene Ontology termsGO:0010227 - floral organ abscission (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR039639 - Protein IDA-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034518.1 putative Membrane lipoprotein [Cucumis melo var. makuwa]4.0e-1962.77Show/hide
Query:  SSQNLSPMASSRF----TPIAIFSIFLLLLLSGFCSATRPGKTIDMSDNNSFDYK-TGFRYVGQTFSFLPKGVPVPPSGPSDRHNSKVDSIPHN
        SS + S  +SS F      I IF I LLLLLSGF SATRPG T++  D ++ +YK T FRY GQTF FLPKGVP+PPSGPSDRHNS VDS+P N
Subjt:  SSQNLSPMASSRF----TPIAIFSIFLLLLLSGFCSATRPGKTIDMSDNNSFDYK-TGFRYVGQTFSFLPKGVPVPPSGPSDRHNSKVDSIPHN
KAG6601330.1 Protein IDA, partial [Cucurbita argyrosperma subsp. sororia]6.6e-2265.56Show/hide
Query:  SSQNLSPMASSRFTPIAIFSIFLLLLLSGFCSATRPGKTID---MSDNNSFDYKTGFRYVGQTFSFLPKGVPVPPSGPSDRHNSKVDSIP
        SS + S  +SS  +  AIF + LLLL+SGFCSATRPGKT+      D ++F+YKTGFRYVGQTFS+LP+GVP+PPSGPSDRHNS VDS+P
Subjt:  SSQNLSPMASSRFTPIAIFSIFLLLLLSGFCSATRPGKTID---MSDNNSFDYKTGFRYVGQTFSFLPKGVPVPPSGPSDRHNSKVDSIP
KAG7032113.1 Protein IDA, partial [Cucurbita argyrosperma subsp. argyrosperma]4.3e-2167.44Show/hide
Query:  LSPMASSRFTPIAIFSIFLLLLLSGFCSATRPGKTID---MSDNNSFDYKTGFRYVGQTFSFLPKGVPVPPSGPSDRHNSKVDSIP
        LS  +SS  +  AIF + LLLL+SGFCSATRPGKT+      D  +F+YKTGFRYVGQTFS+LP+GVP+PPSGPSDRHNS VDS+P
Subjt:  LSPMASSRFTPIAIFSIFLLLLLSGFCSATRPGKTID---MSDNNSFDYKTGFRYVGQTFSFLPKGVPVPPSGPSDRHNSKVDSIP
KGN52035.1 hypothetical protein Csa_008746 [Cucumis sativus]1.8e-1967.06Show/hide
Query:  ASSRFTPIAIF-SIFLLLLLSGFCSATRPGKTIDMSDNN---SFDYKTGFRYVGQTFSFLPKGVPVPPSGPSDRHNSKVDSIPHN
        +SS  T I IF  + LLLLLSG  SATRPGKT++ ++ N   S  YKT FRY GQTFSFLPKGVP+PPSGPSDRHNS VDS+P N
Subjt:  ASSRFTPIAIF-SIFLLLLLSGFCSATRPGKTIDMSDNN---SFDYKTGFRYVGQTFSFLPKGVPVPPSGPSDRHNSKVDSIPHN
TYK09072.1 putative Membrane lipoprotein [Cucumis melo var. makuwa]4.0e-1962.77Show/hide
Query:  SSQNLSPMASSRF----TPIAIFSIFLLLLLSGFCSATRPGKTIDMSDNNSFDYK-TGFRYVGQTFSFLPKGVPVPPSGPSDRHNSKVDSIPHN
        SS + S  +SS F      I IF I LLLLLSGF SATRPG T++  D ++ +YK T FRY GQTF FLPKGVP+PPSGPSDRHNS VDS+P N
Subjt:  SSQNLSPMASSRF----TPIAIFSIFLLLLLSGFCSATRPGKTIDMSDNNSFDYK-TGFRYVGQTFSFLPKGVPVPPSGPSDRHNSKVDSIPHN
TrEMBL top hitse value%identityAlignment
A0A0A0KR07 Uncharacterized protein8.8e-2067.06Show/hide
Query:  ASSRFTPIAIF-SIFLLLLLSGFCSATRPGKTIDMSDNN---SFDYKTGFRYVGQTFSFLPKGVPVPPSGPSDRHNSKVDSIPHN
        +SS  T I IF  + LLLLLSG  SATRPGKT++ ++ N   S  YKT FRY GQTFSFLPKGVP+PPSGPSDRHNS VDS+P N
Subjt:  ASSRFTPIAIF-SIFLLLLLSGFCSATRPGKTIDMSDNN---SFDYKTGFRYVGQTFSFLPKGVPVPPSGPSDRHNSKVDSIPHN
A0A2P5SAI3 Uncharacterized protein3.2e-1458.9Show/hide
Query:  IFSIFLLLLLSGFCSATRPGKTIDMSDNNSF-----DYKTGFRYVGQTFSFLPKGVPVPPSGPSDRHNSKVDS
        I+ +FL+ LL+G   ATRPGKTI + D  S       Y+TGFRY GQ F+F PKG+P+PPSGPS RHNS VDS
Subjt:  IFSIFLLLLLSGFCSATRPGKTIDMSDNNSF-----DYKTGFRYVGQTFSFLPKGVPVPPSGPSDRHNSKVDS
A0A5A7SV51 Putative Membrane lipoprotein2.0e-1962.77Show/hide
Query:  SSQNLSPMASSRF----TPIAIFSIFLLLLLSGFCSATRPGKTIDMSDNNSFDYK-TGFRYVGQTFSFLPKGVPVPPSGPSDRHNSKVDSIPHN
        SS + S  +SS F      I IF I LLLLLSGF SATRPG T++  D ++ +YK T FRY GQTF FLPKGVP+PPSGPSDRHNS VDS+P N
Subjt:  SSQNLSPMASSRF----TPIAIFSIFLLLLLSGFCSATRPGKTIDMSDNNSFDYK-TGFRYVGQTFSFLPKGVPVPPSGPSDRHNSKVDSIPHN
A0A5D2EBI1 Uncharacterized protein3.2e-1458.9Show/hide
Query:  IFSIFLLLLLSGFCSATRPGKTIDMSDNNSF-----DYKTGFRYVGQTFSFLPKGVPVPPSGPSDRHNSKVDS
        I+ +FL+ LL+G   ATRPGKTI + D  S       Y+TGFRY GQ F+F PKG+P+PPSGPS RHNS VDS
Subjt:  IFSIFLLLLLSGFCSATRPGKTIDMSDNNSF-----DYKTGFRYVGQTFSFLPKGVPVPPSGPSDRHNSKVDS
A0A5D3CCP4 Putative Membrane lipoprotein2.0e-1962.77Show/hide
Query:  SSQNLSPMASSRF----TPIAIFSIFLLLLLSGFCSATRPGKTIDMSDNNSFDYK-TGFRYVGQTFSFLPKGVPVPPSGPSDRHNSKVDSIPHN
        SS + S  +SS F      I IF I LLLLLSGF SATRPG T++  D ++ +YK T FRY GQTF FLPKGVP+PPSGPSDRHNS VDS+P N
Subjt:  SSQNLSPMASSRF----TPIAIFSIFLLLLLSGFCSATRPGKTIDMSDNNSFDYK-TGFRYVGQTFSFLPKGVPVPPSGPSDRHNSKVDSIPHN
SwissProt top hitse value%identityAlignment
Q8LAD7 Protein IDA2.8e-0739.02Show/hide
Query:  MASSRFTPIAIFSIFLLLLLSGFCSATRPGKTIDMSDN-NSFDYKTGFRYVGQTFSFLPKGVPVPPSGPSDRHNSKVDSIPH
        MA  R   + +  +  L   S   +A R G T++M  N     +K         F +LPKGVP+PPS PS RHNS V+S+PH
Subjt:  MASSRFTPIAIFSIFLLLLLSGFCSATRPGKTIDMSDN-NSFDYKTGFRYVGQTFSFLPKGVPVPPSGPSDRHNSKVDSIPH
Arabidopsis top hitse value%identityAlignment
AT1G68765.1 Putative membrane lipoprotein2.0e-0839.02Show/hide
Query:  MASSRFTPIAIFSIFLLLLLSGFCSATRPGKTIDMSDN-NSFDYKTGFRYVGQTFSFLPKGVPVPPSGPSDRHNSKVDSIPH
        MA  R   + +  +  L   S   +A R G T++M  N     +K         F +LPKGVP+PPS PS RHNS V+S+PH
Subjt:  MASSRFTPIAIFSIFLLLLLSGFCSATRPGKTIDMSDN-NSFDYKTGFRYVGQTFSFLPKGVPVPPSGPSDRHNSKVDSIPH
AT3G25655.1 inflorescence deficient in abscission (IDA)-like 11.8e-0434.18Show/hide
Query:  IAIFSIFLLLLLSGFCSATRPGKTIDMSDNNSFDYKT------GFRYVGQTFSFLPKGVPVPPSGPSDRHNSKVDSIPH
        + ++ +FLL+   G  +AT     I +S+      ++      GF + G+ F    K V VPPSGPS RHNS V+++ H
Subjt:  IAIFSIFLLLLLSGFCSATRPGKTIDMSDNNSFDYKT------GFRYVGQTFSFLPKGVPVPPSGPSDRHNSKVDSIPH
AT5G64667.1 inflorescence deficient in abscission (IDA)-like 25.1e-0433.73Show/hide
Query:  SSQNLSPMASSRFTPIAIFS---IFLLLLLSGFCSATRPGKTIDMSDNNSFDYKTGFRYVGQTFSFLPKGVPVPPSGPSDRHN
        SS+N     +S F  ++ F+   + LL+LL GFC+  R    +  S  +            Q   FLP+  PVP SGPS +HN
Subjt:  SSQNLSPMASSRFTPIAIFS---IFLLLLLSGFCSATRPGKTIDMSDNNSFDYKTGFRYVGQTFSFLPKGVPVPPSGPSDRHN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGCTCACAAAATCTCTCCCCCATGGCTTCTTCTCGATTCACCCCAATCGCCATTTTTTCCATTTTTCTCCTCCTCCTCCTTTCTGGATTTTGCTCTGCGACTCGCCCGGG
GAAGACGATCGACATGTCGGATAATAATTCTTTTGATTACAAGACCGGCTTCCGATATGTCGGACAGACCTTCAGCTTCCTCCCCAAAGGCGTCCCCGTTCCTCCTTCAG
GCCCCTCCGACAGGCACAATTCCAAAGTCGACTCCATTCCTCACAAT
mRNA sequenceShow/hide mRNA sequence
AGCTCACAAAATCTCTCCCCCATGGCTTCTTCTCGATTCACCCCAATCGCCATTTTTTCCATTTTTCTCCTCCTCCTCCTTTCTGGATTTTGCTCTGCGACTCGCCCGGG
GAAGACGATCGACATGTCGGATAATAATTCTTTTGATTACAAGACCGGCTTCCGATATGTCGGACAGACCTTCAGCTTCCTCCCCAAAGGCGTCCCCGTTCCTCCTTCAG
GCCCCTCCGACAGGCACAATTCCAAAGTCGACTCCATTCCTCACAAT
Protein sequenceShow/hide protein sequence
SSQNLSPMASSRFTPIAIFSIFLLLLLSGFCSATRPGKTIDMSDNNSFDYKTGFRYVGQTFSFLPKGVPVPPSGPSDRHNSKVDSIPHN