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MS015321 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015321
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold2:2578382..2578791
RNA-Seq ExpressionMS015321
SyntenyMS015321
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7032093.1 hypothetical protein SDJN02_06136, partial [Cucurbita argyrosperma subsp. argyrosperma]4.6e-2863.49Show/hide
Query:  MDFKAELNKQVVEEEDGFYAEIRKRIILLLTAYDDDE---------MERGVAGRQSDHQPHLERNLSRRQNGDDFEGRVCH----ENGNGTGVFIPQAVK
        MDFKAELN QV EE+DG+YAEIRK+IILLLT YDDDE          +RG A +     P  ERNLS   NG+D EG V H    ENGNGTGVFIPQAVK
Subjt:  MDFKAELNKQVVEEEDGFYAEIRKRIILLLTAYDDDE---------MERGVAGRQSDHQPHLERNLSRRQNGDDFEGRVCH----ENGNGTGVFIPQAVK

Query:  YTRYCIFRRIRRHERKEK---NRQKD
        Y RY IFRR+R+HERKEK   NRQ+D
Subjt:  YTRYCIFRRIRRHERKEK---NRQKD

XP_008446569.1 PREDICTED: uncharacterized protein LOC103489264 [Cucumis melo]3.2e-2961.29Show/hide
Query:  MDFKAELNKQVVEEEDGFYAEIRKRIILLLTAYDDDE-------MERGVAGRQSDHQPHLERNLSRRQNGDDFEGRVCH----ENGNGTGVFIPQAVKYT
        MDFKAELN Q+ EEED +YAEIRK+IILLLTAYDDDE        + G   +Q D  P ++ NLS   NG DFE  V H    ENGNGTGVFIPQAVKY 
Subjt:  MDFKAELNKQVVEEEDGFYAEIRKRIILLLTAYDDDE-------MERGVAGRQSDHQPHLERNLSRRQNGDDFEGRVCH----ENGNGTGVFIPQAVKYT

Query:  RYCIFRRIRRHERKEKNRQKDNKT
        +YC+ RR+R+HERKEK+RQK+ +T
Subjt:  RYCIFRRIRRHERKEKNRQKDNKT

XP_011655764.1 uncharacterized protein LOC105435583 [Cucumis sativus]4.9e-3062.7Show/hide
Query:  MDFKAELNKQVVEEEDGFYAEIRKRIILLLTAY-DDDEMER--------GVAGRQSDHQPHLERNLSRRQNGDDFEGRVCH----ENGNGTGVFIPQAVK
        MDFKAELN Q+ EEED +YAEIRK+I LLLTAY DDDE+E+        G   RQ D  P LERN+S   NG+DF+  V H    ENGNGTGVFIPQAVK
Subjt:  MDFKAELNKQVVEEEDGFYAEIRKRIILLLTAY-DDDEMER--------GVAGRQSDHQPHLERNLSRRQNGDDFEGRVCH----ENGNGTGVFIPQAVK

Query:  YTRYCIFRRIRRHERKEKNRQKDNKT
        Y +YC+FRR+R+HERKEK+RQK+ +T
Subjt:  YTRYCIFRRIRRHERKEKNRQKDNKT

XP_022957510.1 uncharacterized protein LOC111458884 [Cucurbita moschata]4.6e-2863.49Show/hide
Query:  MDFKAELNKQVVEEEDGFYAEIRKRIILLLTAYDDDE---------MERGVAGRQSDHQPHLERNLSRRQNGDDFEGRVCH----ENGNGTGVFIPQAVK
        MDFKAELN QV EE+DG+YAEIRK+IILLLT YDDDE          +RG A +     P  ERNLS   NG+D EG V H    ENGNGTGVFIPQAVK
Subjt:  MDFKAELNKQVVEEEDGFYAEIRKRIILLLTAYDDDE---------MERGVAGRQSDHQPHLERNLSRRQNGDDFEGRVCH----ENGNGTGVFIPQAVK

Query:  YTRYCIFRRIRRHERKEK---NRQKD
        Y RY IFRR+R+HERKEK   NRQ+D
Subjt:  YTRYCIFRRIRRHERKEK---NRQKD

XP_023524582.1 uncharacterized protein LOC111788475 isoform X1 [Cucurbita pepo subsp. pepo]6.7e-2763.2Show/hide
Query:  MDFKAELNKQVVEEEDGFYAEIRKRIILLLTAY-DDDEMERGV-------AGRQSDHQPHLERNLSRRQNGDDFEGRVCH----ENGNGTGVFIPQAVKY
        MDFKAELN QV EE+DG+YAEIRK+IILLLTA  DDD++ER         A +     P  ERNLS   NG+D EG V H    ENGNGTGVFIPQAVKY
Subjt:  MDFKAELNKQVVEEEDGFYAEIRKRIILLLTAY-DDDEMERGV-------AGRQSDHQPHLERNLSRRQNGDDFEGRVCH----ENGNGTGVFIPQAVKY

Query:  TRYCIFRRIRRHERKEK---NRQKD
         RY IFRR+R+HERKEK   NRQ+D
Subjt:  TRYCIFRRIRRHERKEK---NRQKD

TrEMBL top hitse value%identityAlignment
A0A0A0KT55 Uncharacterized protein2.4e-3062.7Show/hide
Query:  MDFKAELNKQVVEEEDGFYAEIRKRIILLLTAY-DDDEMER--------GVAGRQSDHQPHLERNLSRRQNGDDFEGRVCH----ENGNGTGVFIPQAVK
        MDFKAELN Q+ EEED +YAEIRK+I LLLTAY DDDE+E+        G   RQ D  P LERN+S   NG+DF+  V H    ENGNGTGVFIPQAVK
Subjt:  MDFKAELNKQVVEEEDGFYAEIRKRIILLLTAY-DDDEMER--------GVAGRQSDHQPHLERNLSRRQNGDDFEGRVCH----ENGNGTGVFIPQAVK

Query:  YTRYCIFRRIRRHERKEKNRQKDNKT
        Y +YC+FRR+R+HERKEK+RQK+ +T
Subjt:  YTRYCIFRRIRRHERKEKNRQKDNKT

A0A1S3BG13 uncharacterized protein LOC1034892641.5e-2961.29Show/hide
Query:  MDFKAELNKQVVEEEDGFYAEIRKRIILLLTAYDDDE-------MERGVAGRQSDHQPHLERNLSRRQNGDDFEGRVCH----ENGNGTGVFIPQAVKYT
        MDFKAELN Q+ EEED +YAEIRK+IILLLTAYDDDE        + G   +Q D  P ++ NLS   NG DFE  V H    ENGNGTGVFIPQAVKY 
Subjt:  MDFKAELNKQVVEEEDGFYAEIRKRIILLLTAYDDDE-------MERGVAGRQSDHQPHLERNLSRRQNGDDFEGRVCH----ENGNGTGVFIPQAVKYT

Query:  RYCIFRRIRRHERKEKNRQKDNKT
        +YC+ RR+R+HERKEK+RQK+ +T
Subjt:  RYCIFRRIRRHERKEKNRQKDNKT

A0A5A7SZ32 Uncharacterized protein1.1e-2260.58Show/hide
Query:  MDFKAELNKQVVEEEDGFYAEIRKRIILLLTAYDDDE-------MERGVAGRQSDHQPHLERNLSRRQNGDDFEGRVCH----ENGNGTGVFIPQAVKYT
        MDFKAELN Q+ EEED +YAEIRK+IILLLTAYDDDE        + G   +Q D  P ++ NLS   NG DFE  V H    ENGNGTGVFIPQAVKY 
Subjt:  MDFKAELNKQVVEEEDGFYAEIRKRIILLLTAYDDDE-------MERGVAGRQSDHQPHLERNLSRRQNGDDFEGRVCH----ENGNGTGVFIPQAVKYT

Query:  RYCI
        +YC+
Subjt:  RYCI

A0A6J1H0R7 uncharacterized protein LOC1114588842.2e-2863.49Show/hide
Query:  MDFKAELNKQVVEEEDGFYAEIRKRIILLLTAYDDDE---------MERGVAGRQSDHQPHLERNLSRRQNGDDFEGRVCH----ENGNGTGVFIPQAVK
        MDFKAELN QV EE+DG+YAEIRK+IILLLT YDDDE          +RG A +     P  ERNLS   NG+D EG V H    ENGNGTGVFIPQAVK
Subjt:  MDFKAELNKQVVEEEDGFYAEIRKRIILLLTAYDDDE---------MERGVAGRQSDHQPHLERNLSRRQNGDDFEGRVCH----ENGNGTGVFIPQAVK

Query:  YTRYCIFRRIRRHERKEK---NRQKD
        Y RY IFRR+R+HERKEK   NRQ+D
Subjt:  YTRYCIFRRIRRHERKEK---NRQKD

A0A6J1JBG9 uncharacterized protein LOC1114852391.4e-2562.18Show/hide
Query:  MDFKAELNKQVVEEEDGFYAEIRKRIILLLTAYDDDE-MER--GVAGRQSDHQ-----PHLERNLSRRQNGDDFEGRVCH----ENGNGTGVFIPQAVKY
        MDFKAELN QV EE+D +YAEIRK+IILLLT YDDDE +ER    A ++   Q     P  ERNLS   NG+D E  V H    ENGNGTGVFIPQAV++
Subjt:  MDFKAELNKQVVEEEDGFYAEIRKRIILLLTAYDDDE-MER--GVAGRQSDHQ-----PHLERNLSRRQNGDDFEGRVCH----ENGNGTGVFIPQAVKY

Query:  TRYCIFRRIRRHERKEKNR
         RY IFRR+R+HERKEK+R
Subjt:  TRYCIFRRIRRHERKEKNR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTCAAAGCAGAGCTCAACAAACAAGTAGTAGAAGAAGAAGATGGTTTCTATGCTGAGATAAGGAAGCGGATCATTCTACTTTTGACAGCATACGATGATGACGA
GATGGAACGGGGTGTAGCGGGTCGACAAAGCGATCATCAGCCGCACCTGGAGAGAAATTTGAGTAGGCGCCAAAATGGGGATGATTTTGAAGGACGTGTTTGCCATGAAA
ATGGGAATGGAACAGGGGTTTTCATTCCTCAAGCAGTCAAATACACAAGATATTGTATTTTCAGGAGAATAAGAAGGCATGAGAGAAAAGAAAAAAACAGGCAAAAGGAC
AACAAAACC
mRNA sequenceShow/hide mRNA sequence
ATGGATTTCAAAGCAGAGCTCAACAAACAAGTAGTAGAAGAAGAAGATGGTTTCTATGCTGAGATAAGGAAGCGGATCATTCTACTTTTGACAGCATACGATGATGACGA
GATGGAACGGGGTGTAGCGGGTCGACAAAGCGATCATCAGCCGCACCTGGAGAGAAATTTGAGTAGGCGCCAAAATGGGGATGATTTTGAAGGACGTGTTTGCCATGAAA
ATGGGAATGGAACAGGGGTTTTCATTCCTCAAGCAGTCAAATACACAAGATATTGTATTTTCAGGAGAATAAGAAGGCATGAGAGAAAAGAAAAAAACAGGCAAAAGGAC
AACAAAACC
Protein sequenceShow/hide protein sequence
MDFKAELNKQVVEEEDGFYAEIRKRIILLLTAYDDDEMERGVAGRQSDHQPHLERNLSRRQNGDDFEGRVCHENGNGTGVFIPQAVKYTRYCIFRRIRRHERKEKNRQKD
NKT