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MS015335 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015335
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprotein NIM1-INTERACTING 2
Genome locationscaffold2:2671582..2672010
RNA-Seq ExpressionMS015335
SyntenyMS015335
Gene Ontology termsGO:0010112 - regulation of systemic acquired resistance (biological process)
InterPro domainsIPR034577 - Protein NIM1-INTERACTING 2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573971.1 hypothetical protein SDJN03_27858, partial [Cucurbita argyrosperma subsp. sororia]1.5e-2857.96Show/hide
Query:  MPFELFPASRNSERGKRK--RGDDED-----AAENRKDLAADEGKGAAAMATDEEVEEFFAILRRLHAATKYIEKIDGASHLLMGKR---SKPSAEEADE
        MPFELFP+SR ++RGKRK  RG+  D     AA N+K+  A+ G     M +DEEVEEFFAIL+RLHAATKYIEKIDGA  LLMGKR   +K S +E D 
Subjt:  MPFELFPASRNSERGKRK--RGDDED-----AAENRKDLAADEGKGAAAMATDEEVEEFFAILRRLHAATKYIEKIDGASHLLMGKR---SKPSAEEADE

Query:  IGIRGEKIPEHEVDLDRSLDLDLNLEPASVKSDAKDRRIRSKHPK----PSSADSRK
        + IR ++IPE ++D +  LDLDLNLEPASV+SD K+RR RS + K     S+ADSR+
Subjt:  IGIRGEKIPEHEVDLDRSLDLDLNLEPASVKSDAKDRRIRSKHPK----PSSADSRK

KGN52074.1 hypothetical protein Csa_008594 [Cucumis sativus]2.6e-3665.97Show/hide
Query:  MPFELFPASRNSERGKRKRGDDEDAAENRKDLAADEGKGAAAMATDEEVEEFFAILRRLHAATKYIEKIDGASHLLMGKRSKP---SAEEADEIGIRGEK
        MPFELFPASR++ERGKRKRGDD     N+KD+ A+EG+  A  ATDEEVEEFF+IL+RLHAATKYIEKIDGASHLLMGKR KP   + EE DE+GI+ E+
Subjt:  MPFELFPASRNSERGKRKRGDDEDAAENRKDLAADEGKGAAAMATDEEVEEFFAILRRLHAATKYIEKIDGASHLLMGKRSKP---SAEEADEIGIRGEK

Query:  IPEHEVDLDRSLDLDLNLEPASVKSDAKDRRIRSKHPKPSSADS
        IPE +  LDR+LDLDLNLEP  V+S+ K R  +++  KPS  DS
Subjt:  IPEHEVDLDRSLDLDLNLEPASVKSDAKDRRIRSKHPKPSSADS

XP_008446591.1 PREDICTED: protein NIM1-INTERACTING 2 [Cucumis melo]2.9e-3566.67Show/hide
Query:  MPFELFPASRNSERGKRKRGDDEDAAENRKDLAADEGKGAAAMATDEEVEEFFAILRRLHAATKYIEKIDGASHLLMGKRS---KPSAEEADEIGIRGEK
        MPFELFP SR+++RGKRKRGDD  A  N+KD+   EGK  A  ATDEEVEEFF+IL+RLHAATKYIEKIDGASHLLMGKRS   K + EE DE+GIR E+
Subjt:  MPFELFPASRNSERGKRKRGDDEDAAENRKDLAADEGKGAAAMATDEEVEEFFAILRRLHAATKYIEKIDGASHLLMGKRS---KPSAEEADEIGIRGEK

Query:  IPEHEVDLDRSLDLDLNLEPASVKSDAKDRRIRSKHPKPSSADS
        IPE +  LDR+LDLDLNLEP  V+S+ K R  +S++ KPS  DS
Subjt:  IPEHEVDLDRSLDLDLNLEPASVKSDAKDRRIRSKHPKPSSADS

XP_022944860.1 uncharacterized protein LOC111449260 [Cucurbita moschata]1.5e-2857.96Show/hide
Query:  MPFELFPASRNSERGKRK--RGDDED-----AAENRKDLAADEGKGAAAMATDEEVEEFFAILRRLHAATKYIEKIDGASHLLMGKR---SKPSAEEADE
        MPFELFP+SR ++RGKRK  RG+  D     AA N+K+  A+ G     M +DEEVEEFFAIL+RLHAATKYIEKIDGA  LLMGKR   +K S +E D 
Subjt:  MPFELFPASRNSERGKRK--RGDDED-----AAENRKDLAADEGKGAAAMATDEEVEEFFAILRRLHAATKYIEKIDGASHLLMGKR---SKPSAEEADE

Query:  IGIRGEKIPEHEVDLDRSLDLDLNLEPASVKSDAKDRRIRSKHPK----PSSADSRK
        + IR ++IPE ++D +  LDLDLNLEPASV+SD K+RR RS + K     S+ADSR+
Subjt:  IGIRGEKIPEHEVDLDRSLDLDLNLEPASVKSDAKDRRIRSKHPK----PSSADSRK

XP_038892789.1 protein NIM1-INTERACTING 2 [Benincasa hispida]9.9e-3668.75Show/hide
Query:  MPFELFPASRNSERGKRKRGDDEDAAENRKDLAADEGKGAAAMATDEEVEEFFAILRRLHAATKYIEKIDGASHLLMGKRSKP---SAEEADEIGIRGEK
        MPFELFPASR+++RGKRKR DD      R D  AD GK  A  ATDEEVEEFF+IL+RLHAATKYIEKIDGAS LLMGKRSKP   S EEADE+ IR EK
Subjt:  MPFELFPASRNSERGKRKRGDDEDAAENRKDLAADEGKGAAAMATDEEVEEFFAILRRLHAATKYIEKIDGASHLLMGKRSKP---SAEEADEIGIRGEK

Query:  IPEHEVDLDRSLDLDLNLEPASVKSDAKDRRIRSKHPKPSSADS
        IP+H+  LDR+LDLDLNLEPA V+SD  D+  RS++ K S ADS
Subjt:  IPEHEVDLDRSLDLDLNLEPASVKSDAKDRRIRSKHPKPSSADS

TrEMBL top hitse value%identityAlignment
A0A0A0KT67 Uncharacterized protein1.3e-3665.97Show/hide
Query:  MPFELFPASRNSERGKRKRGDDEDAAENRKDLAADEGKGAAAMATDEEVEEFFAILRRLHAATKYIEKIDGASHLLMGKRSKP---SAEEADEIGIRGEK
        MPFELFPASR++ERGKRKRGDD     N+KD+ A+EG+  A  ATDEEVEEFF+IL+RLHAATKYIEKIDGASHLLMGKR KP   + EE DE+GI+ E+
Subjt:  MPFELFPASRNSERGKRKRGDDEDAAENRKDLAADEGKGAAAMATDEEVEEFFAILRRLHAATKYIEKIDGASHLLMGKRSKP---SAEEADEIGIRGEK

Query:  IPEHEVDLDRSLDLDLNLEPASVKSDAKDRRIRSKHPKPSSADS
        IPE +  LDR+LDLDLNLEP  V+S+ K R  +++  KPS  DS
Subjt:  IPEHEVDLDRSLDLDLNLEPASVKSDAKDRRIRSKHPKPSSADS

A0A1S3BFE7 protein NIM1-INTERACTING 21.4e-3566.67Show/hide
Query:  MPFELFPASRNSERGKRKRGDDEDAAENRKDLAADEGKGAAAMATDEEVEEFFAILRRLHAATKYIEKIDGASHLLMGKRS---KPSAEEADEIGIRGEK
        MPFELFP SR+++RGKRKRGDD  A  N+KD+   EGK  A  ATDEEVEEFF+IL+RLHAATKYIEKIDGASHLLMGKRS   K + EE DE+GIR E+
Subjt:  MPFELFPASRNSERGKRKRGDDEDAAENRKDLAADEGKGAAAMATDEEVEEFFAILRRLHAATKYIEKIDGASHLLMGKRS---KPSAEEADEIGIRGEK

Query:  IPEHEVDLDRSLDLDLNLEPASVKSDAKDRRIRSKHPKPSSADS
        IPE +  LDR+LDLDLNLEP  V+S+ K R  +S++ KPS  DS
Subjt:  IPEHEVDLDRSLDLDLNLEPASVKSDAKDRRIRSKHPKPSSADS

A0A5A7SZN6 Protein NIM1-INTERACTING 21.4e-3566.67Show/hide
Query:  MPFELFPASRNSERGKRKRGDDEDAAENRKDLAADEGKGAAAMATDEEVEEFFAILRRLHAATKYIEKIDGASHLLMGKRS---KPSAEEADEIGIRGEK
        MPFELFP SR+++RGKRKRGDD  A  N+KD+   EGK  A  ATDEEVEEFF+IL+RLHAATKYIEKIDGASHLLMGKRS   K + EE DE+GIR E+
Subjt:  MPFELFPASRNSERGKRKRGDDEDAAENRKDLAADEGKGAAAMATDEEVEEFFAILRRLHAATKYIEKIDGASHLLMGKRS---KPSAEEADEIGIRGEK

Query:  IPEHEVDLDRSLDLDLNLEPASVKSDAKDRRIRSKHPKPSSADS
        IPE +  LDR+LDLDLNLEP  V+S+ K R  +S++ KPS  DS
Subjt:  IPEHEVDLDRSLDLDLNLEPASVKSDAKDRRIRSKHPKPSSADS

A0A6J1FZ89 uncharacterized protein LOC1114492607.4e-2957.96Show/hide
Query:  MPFELFPASRNSERGKRK--RGDDED-----AAENRKDLAADEGKGAAAMATDEEVEEFFAILRRLHAATKYIEKIDGASHLLMGKR---SKPSAEEADE
        MPFELFP+SR ++RGKRK  RG+  D     AA N+K+  A+ G     M +DEEVEEFFAIL+RLHAATKYIEKIDGA  LLMGKR   +K S +E D 
Subjt:  MPFELFPASRNSERGKRK--RGDDED-----AAENRKDLAADEGKGAAAMATDEEVEEFFAILRRLHAATKYIEKIDGASHLLMGKR---SKPSAEEADE

Query:  IGIRGEKIPEHEVDLDRSLDLDLNLEPASVKSDAKDRRIRSKHPK----PSSADSRK
        + IR ++IPE ++D +  LDLDLNLEPASV+SD K+RR RS + K     S+ADSR+
Subjt:  IGIRGEKIPEHEVDLDRSLDLDLNLEPASVKSDAKDRRIRSKHPK----PSSADSRK

A0A6J1HXL3 uncharacterized protein LOC1114675661.1e-2457.55Show/hide
Query:  MPFELFPASRNSERGKRKRGDDEDA--------AENRKDLAADEGKGAAAMATDEEVEEFFAILRRLHAATKYIEKIDGASHLLMGKR---SKPSAEEAD
        MPFELFP+SR ++RGKRKR   E A        A N+K   AD GK    M +DEEVEEFF IL+RLHAATKYIEKIDGA   LMGKR   +K S +E D
Subjt:  MPFELFPASRNSERGKRKRGDDEDA--------AENRKDLAADEGKGAAAMATDEEVEEFFAILRRLHAATKYIEKIDGASHLLMGKR---SKPSAEEAD

Query:  EIGIRGEKIPEHEVDLDRSLDLDLNLEPASVKSDAKDRR
         + IR ++IPE ++D +  LDLDLNLEPAS  S A  RR
Subjt:  EIGIRGEKIPEHEVDLDRSLDLDLNLEPASVKSDAKDRR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGTTTGAGTTGTTTCCGGCGAGCCGAAATTCGGAAAGGGGGAAAAGAAAGCGTGGCGATGACGAAGACGCCGCCGAAAACCGGAAGGACTTGGCGGCGGACGAAGG
AAAAGGAGCGGCGGCGATGGCGACGGACGAAGAGGTGGAGGAGTTCTTCGCCATTCTGAGGAGATTACACGCGGCGACGAAATACATAGAGAAGATCGACGGTGCGAGCC
ATCTGTTGATGGGAAAGAGATCGAAGCCGTCCGCCGAAGAAGCCGATGAAATTGGAATTAGGGGAGAAAAAATTCCAGAGCACGAAGTGGATTTGGATAGAAGTTTGGAC
CTGGATCTGAACTTAGAACCTGCGTCCGTTAAATCGGATGCTAAAGACAGGAGAATCCGGAGCAAGCATCCGAAGCCGTCCTCCGCCGATTCGCGGAAG
mRNA sequenceShow/hide mRNA sequence
ATGCCGTTTGAGTTGTTTCCGGCGAGCCGAAATTCGGAAAGGGGGAAAAGAAAGCGTGGCGATGACGAAGACGCCGCCGAAAACCGGAAGGACTTGGCGGCGGACGAAGG
AAAAGGAGCGGCGGCGATGGCGACGGACGAAGAGGTGGAGGAGTTCTTCGCCATTCTGAGGAGATTACACGCGGCGACGAAATACATAGAGAAGATCGACGGTGCGAGCC
ATCTGTTGATGGGAAAGAGATCGAAGCCGTCCGCCGAAGAAGCCGATGAAATTGGAATTAGGGGAGAAAAAATTCCAGAGCACGAAGTGGATTTGGATAGAAGTTTGGAC
CTGGATCTGAACTTAGAACCTGCGTCCGTTAAATCGGATGCTAAAGACAGGAGAATCCGGAGCAAGCATCCGAAGCCGTCCTCCGCCGATTCGCGGAAG
Protein sequenceShow/hide protein sequence
MPFELFPASRNSERGKRKRGDDEDAAENRKDLAADEGKGAAAMATDEEVEEFFAILRRLHAATKYIEKIDGASHLLMGKRSKPSAEEADEIGIRGEKIPEHEVDLDRSLD
LDLNLEPASVKSDAKDRRIRSKHPKPSSADSRK