; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS015337 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015337
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionethylene-responsive transcription factor ERF118-like
Genome locationscaffold2:2690703..2691107
RNA-Seq ExpressionMS015337
SyntenyMS015337
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001471 - AP2/ERF domain
IPR016177 - DNA-binding domain superfamily
IPR017392 - AP2/ERF transcription factor ERF/PTI6
IPR036955 - AP2/ERF domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008446593.1 PREDICTED: ethylene-responsive transcription factor ERF118 [Cucumis melo]6.1e-4370.71Show/hide
Query:  RKVRVICYDPDATDSSSSEDEGEKFAGGRKKKRIVHEIHLPLLRHSPKTGIESEGSQNSNNKIKTP-----HVVLKNSSTRKPIRPSSSKYRGVRQRTWG
        RK+R+ICYDPDATDSSSSEDEGE +A  RK  RIVHEIHLP L+ S    ++SE SQNSNN+ K P       + KN S+R   RPSSSKYRGVRQR+WG
Subjt:  RKVRVICYDPDATDSSSSEDEGEKFAGGRKKKRIVHEIHLPLLRHSPKTGIESEGSQNSNNKIKTP-----HVVLKNSSTRKPIRPSSSKYRGVRQRTWG

Query:  KWAAEIRDPFKKARVWLGTYDTAEEASQAYELKRLEFEAM
        KWAAEIRDPFK++RVWLGTYDTAEEASQAYE +RL+FEAM
Subjt:  KWAAEIRDPFKKARVWLGTYDTAEEASQAYELKRLEFEAM

XP_011655773.1 ethylene-responsive transcription factor ERF118 [Cucumis sativus]1.4e-4270.71Show/hide
Query:  RKVRVICYDPDATDSSSSEDEGEKFAGGRKKKRIVHEIHLPLLRHSPKTGIESEGSQNSNN-----KIKTPHVVLKNSSTRKPIRPSSSKYRGVRQRTWG
        RK+R+ICYDPDATDSSSSEDEGE +A  RK  RIVHEIHLP L+ S    +ESE SQNSNN     K K    + KN S+R   RPSSSKYRGVRQR+WG
Subjt:  RKVRVICYDPDATDSSSSEDEGEKFAGGRKKKRIVHEIHLPLLRHSPKTGIESEGSQNSNN-----KIKTPHVVLKNSSTRKPIRPSSSKYRGVRQRTWG

Query:  KWAAEIRDPFKKARVWLGTYDTAEEASQAYELKRLEFEAM
        KWAAEIRDPFK++RVWLGTYDTAEEASQAYE +RL+FE M
Subjt:  KWAAEIRDPFKKARVWLGTYDTAEEASQAYELKRLEFEAM

XP_022150475.1 ethylene-responsive transcription factor ERF118-like [Momordica charantia]4.8e-6495.56Show/hide
Query:  RKVRVICYDPDATDSSSSEDEGEKFAGGRKKKRIVHEIHLPLLRHSPKTGIESEGSQNSNNKIKTPHVVLKNSSTRKPIRPSSSKYRGVRQRTWGKWAAE
        RKVRVICYDPDATDSSSSEDEGEKFAGGRKKKRIVHEIHLPLLRHSPKTGIESEGSQNSNNKIK      KNSSTRKPIRPSSSKYRGVRQRTWGKWAAE
Subjt:  RKVRVICYDPDATDSSSSEDEGEKFAGGRKKKRIVHEIHLPLLRHSPKTGIESEGSQNSNNKIKTPHVVLKNSSTRKPIRPSSSKYRGVRQRTWGKWAAE

Query:  IRDPFKKARVWLGTYDTAEEASQAYELKRLEFEAM
        IRDPFKKARVWLGTYDTAEEASQAYELKRLEFEAM
Subjt:  IRDPFKKARVWLGTYDTAEEASQAYELKRLEFEAM

XP_022957448.1 ethylene-responsive transcription factor ERF118-like [Cucurbita moschata]2.3e-4270Show/hide
Query:  RKVRVICYDPDATDSSSSEDEGEKFAGGRKKKRIVHEIHLPLLRHSPKTGIESEGSQNSNN-----KIKTPHVVLKNSSTRKPIRPSSSKYRGVRQRTWG
        RKVR+ICYDPDATDSSSSEDEGE++  GRK  R VHEIHLP L    K  +ESE SQNSNN     K+K   V +KN S+ +  R SSSKYRGVRQR WG
Subjt:  RKVRVICYDPDATDSSSSEDEGEKFAGGRKKKRIVHEIHLPLLRHSPKTGIESEGSQNSNN-----KIKTPHVVLKNSSTRKPIRPSSSKYRGVRQRTWG

Query:  KWAAEIRDPFKKARVWLGTYDTAEEASQAYELKRLEFEAM
        KWAAEIRDPFK++R+WLGTYDTAEEASQAYE +RL+FEAM
Subjt:  KWAAEIRDPFKKARVWLGTYDTAEEASQAYELKRLEFEAM

XP_038891824.1 ethylene-responsive transcription factor ERF118-like [Benincasa hispida]1.0e-4271.43Show/hide
Query:  RKVRVICYDPDATDSSSSEDEGEKFAGGRKKKRIVHEIHLPLLRHSPKTGIESEGSQNSNNKIKTP-----HVVLKNSSTRKPIRPSSSKYRGVRQRTWG
        RK+R+ICYDPDATDSSSSEDEGE +A  RK  RIVHEIHLP L+ S    +ESE SQ SNN+ K P       + KN STR   RPSSSKYRGVRQR+WG
Subjt:  RKVRVICYDPDATDSSSSEDEGEKFAGGRKKKRIVHEIHLPLLRHSPKTGIESEGSQNSNNKIKTP-----HVVLKNSSTRKPIRPSSSKYRGVRQRTWG

Query:  KWAAEIRDPFKKARVWLGTYDTAEEASQAYELKRLEFEAM
        KWAAEIRDPFK++RVWLGTYDTAEEASQAYE +RL+FEAM
Subjt:  KWAAEIRDPFKKARVWLGTYDTAEEASQAYELKRLEFEAM

TrEMBL top hitse value%identityAlignment
A0A0A0KWF1 AP2/ERF domain-containing protein6.5e-4370.71Show/hide
Query:  RKVRVICYDPDATDSSSSEDEGEKFAGGRKKKRIVHEIHLPLLRHSPKTGIESEGSQNSNN-----KIKTPHVVLKNSSTRKPIRPSSSKYRGVRQRTWG
        RK+R+ICYDPDATDSSSSEDEGE +A  RK  RIVHEIHLP L+ S    +ESE SQNSNN     K K    + KN S+R   RPSSSKYRGVRQR+WG
Subjt:  RKVRVICYDPDATDSSSSEDEGEKFAGGRKKKRIVHEIHLPLLRHSPKTGIESEGSQNSNN-----KIKTPHVVLKNSSTRKPIRPSSSKYRGVRQRTWG

Query:  KWAAEIRDPFKKARVWLGTYDTAEEASQAYELKRLEFEAM
        KWAAEIRDPFK++RVWLGTYDTAEEASQAYE +RL+FE M
Subjt:  KWAAEIRDPFKKARVWLGTYDTAEEASQAYELKRLEFEAM

A0A1S4DW40 ethylene-responsive transcription factor ERF1182.9e-4370.71Show/hide
Query:  RKVRVICYDPDATDSSSSEDEGEKFAGGRKKKRIVHEIHLPLLRHSPKTGIESEGSQNSNNKIKTP-----HVVLKNSSTRKPIRPSSSKYRGVRQRTWG
        RK+R+ICYDPDATDSSSSEDEGE +A  RK  RIVHEIHLP L+ S    ++SE SQNSNN+ K P       + KN S+R   RPSSSKYRGVRQR+WG
Subjt:  RKVRVICYDPDATDSSSSEDEGEKFAGGRKKKRIVHEIHLPLLRHSPKTGIESEGSQNSNNKIKTP-----HVVLKNSSTRKPIRPSSSKYRGVRQRTWG

Query:  KWAAEIRDPFKKARVWLGTYDTAEEASQAYELKRLEFEAM
        KWAAEIRDPFK++RVWLGTYDTAEEASQAYE +RL+FEAM
Subjt:  KWAAEIRDPFKKARVWLGTYDTAEEASQAYELKRLEFEAM

A0A5A7SYT3 Ethylene-responsive transcription factor ERF1182.9e-4370.71Show/hide
Query:  RKVRVICYDPDATDSSSSEDEGEKFAGGRKKKRIVHEIHLPLLRHSPKTGIESEGSQNSNNKIKTP-----HVVLKNSSTRKPIRPSSSKYRGVRQRTWG
        RK+R+ICYDPDATDSSSSEDEGE +A  RK  RIVHEIHLP L+ S    ++SE SQNSNN+ K P       + KN S+R   RPSSSKYRGVRQR+WG
Subjt:  RKVRVICYDPDATDSSSSEDEGEKFAGGRKKKRIVHEIHLPLLRHSPKTGIESEGSQNSNNKIKTP-----HVVLKNSSTRKPIRPSSSKYRGVRQRTWG

Query:  KWAAEIRDPFKKARVWLGTYDTAEEASQAYELKRLEFEAM
        KWAAEIRDPFK++RVWLGTYDTAEEASQAYE +RL+FEAM
Subjt:  KWAAEIRDPFKKARVWLGTYDTAEEASQAYELKRLEFEAM

A0A6J1D8K2 ethylene-responsive transcription factor ERF118-like2.3e-6495.56Show/hide
Query:  RKVRVICYDPDATDSSSSEDEGEKFAGGRKKKRIVHEIHLPLLRHSPKTGIESEGSQNSNNKIKTPHVVLKNSSTRKPIRPSSSKYRGVRQRTWGKWAAE
        RKVRVICYDPDATDSSSSEDEGEKFAGGRKKKRIVHEIHLPLLRHSPKTGIESEGSQNSNNKIK      KNSSTRKPIRPSSSKYRGVRQRTWGKWAAE
Subjt:  RKVRVICYDPDATDSSSSEDEGEKFAGGRKKKRIVHEIHLPLLRHSPKTGIESEGSQNSNNKIKTPHVVLKNSSTRKPIRPSSSKYRGVRQRTWGKWAAE

Query:  IRDPFKKARVWLGTYDTAEEASQAYELKRLEFEAM
        IRDPFKKARVWLGTYDTAEEASQAYELKRLEFEAM
Subjt:  IRDPFKKARVWLGTYDTAEEASQAYELKRLEFEAM

A0A6J1H089 ethylene-responsive transcription factor ERF118-like1.1e-4270Show/hide
Query:  RKVRVICYDPDATDSSSSEDEGEKFAGGRKKKRIVHEIHLPLLRHSPKTGIESEGSQNSNN-----KIKTPHVVLKNSSTRKPIRPSSSKYRGVRQRTWG
        RKVR+ICYDPDATDSSSSEDEGE++  GRK  R VHEIHLP L    K  +ESE SQNSNN     K+K   V +KN S+ +  R SSSKYRGVRQR WG
Subjt:  RKVRVICYDPDATDSSSSEDEGEKFAGGRKKKRIVHEIHLPLLRHSPKTGIESEGSQNSNN-----KIKTPHVVLKNSSTRKPIRPSSSKYRGVRQRTWG

Query:  KWAAEIRDPFKKARVWLGTYDTAEEASQAYELKRLEFEAM
        KWAAEIRDPFK++R+WLGTYDTAEEASQAYE +RL+FEAM
Subjt:  KWAAEIRDPFKKARVWLGTYDTAEEASQAYELKRLEFEAM

SwissProt top hitse value%identityAlignment
Q9CA27 Ethylene-responsive transcription factor ERF1182.0e-2549.63Show/hide
Query:  RKVRVICYDPDATDSSSSEDEGEKFAGGRKKKRIVHEIHLPLLRHSPKTGIESEGSQNSNNKIKTPHVVLKNSSTRKPIRPSSSKYRGVRQRTWGKWAAE
        RKVR+I  DP ATD SSS++E  K    RK KRIV EI+ P +  S     E     +S +  KT   +  ++S   P      K  GVRQR WGKWAAE
Subjt:  RKVRVICYDPDATDSSSSEDEGEKFAGGRKKKRIVHEIHLPLLRHSPKTGIESEGSQNSNNKIKTPHVVLKNSSTRKPIRPSSSKYRGVRQRTWGKWAAE

Query:  IRDPFKKARVWLGTYDTAEEASQAYELKRLEFEAM
        IRDP KK R WLGT+DT EEA++AY+ K+LEF+A+
Subjt:  IRDPFKKARVWLGTYDTAEEASQAYELKRLEFEAM

Q9FK12 Ethylene-responsive transcription factor CRF32.0e-2041.09Show/hide
Query:  RKVRVICYDPDATDSSSSEDEGEKFAGGRKKKRIVHEIHLPLLRHSPKTGIESEGSQ---NSNNKIKTPHVVLKNSSTRKPIRPSSSKYRGVRQRTWGKW
        +KV +   DPDATDSSS EDE +     R+ KR V+EI +    ++  TG+  +  +   +S+++ ++P    +  + +  +     K+RGVRQR WGKW
Subjt:  RKVRVICYDPDATDSSSSEDEGEKFAGGRKKKRIVHEIHLPLLRHSPKTGIESEGSQ---NSNNKIKTPHVVLKNSSTRKPIRPSSSKYRGVRQRTWGKW

Query:  AAEIRDPFKKARVWLGTYDTAEEASQAYE
        AAEIRDP ++ R+WLGT++TAEEA+  Y+
Subjt:  AAEIRDPFKKARVWLGTYDTAEEASQAYE

Q9LUA2 Ethylene-responsive transcription factor ERF1195.2e-2145.14Show/hide
Query:  RKVRVICYDPDATDSSSSEDEGEKFAGGRKKKRIVHEIHLPLLRHSPKTGIESEGSQNSNN------KIKTPHVVLKNSSTRKPIRPSS---SKYRGVRQ
        RK+R +  DP ATD SSSE+E       +++KR V EI LP  + + +   ES   Q SNN      KI      +  S     +  SS   SK  GVRQ
Subjt:  RKVRVICYDPDATDSSSSEDEGEKFAGGRKKKRIVHEIHLPLLRHSPKTGIESEGSQNSNN------KIKTPHVVLKNSSTRKPIRPSS---SKYRGVRQ

Query:  RTWGKWAAEIRDPFKKARVWLGTYDTAEEASQAYELKRLEFEAM
        R WGKWAAEIR P  K R WLGTY+T E+A+ AY  K+LEF+A+
Subjt:  RTWGKWAAEIRDPFKKARVWLGTYDTAEEASQAYELKRLEFEAM

Q9SUE3 Ethylene-responsive transcription factor CRF49.2e-1846.03Show/hide
Query:  RKVRVICYDPDATDSSSSEDEGEKFAGGRKKKRIVHEIHLPLLRHSPKTGIESEGSQNSNNKIKTPHVVLKNSSTRKPIRPSSSKYRGVRQRTWGKWAAE
        R VRV   D DATDSSS  DE E     R+ KR+++EI +     S  TG  S        +I     V K S + +    +  KYRGVRQR WGKWAAE
Subjt:  RKVRVICYDPDATDSSSSEDEGEKFAGGRKKKRIVHEIHLPLLRHSPKTGIESEGSQNSNNKIKTPHVVLKNSSTRKPIRPSSSKYRGVRQRTWGKWAAE

Query:  IRDPFKKARVWLGTYDTAEEASQAYE
        IRDP ++ R+WLGT+ TAEEA+  Y+
Subjt:  IRDPFKKARVWLGTYDTAEEASQAYE

Q9SUQ2 Ethylene-responsive transcription factor CRF25.7e-2042.96Show/hide
Query:  RKVRVICYDPDATDSSS--SEDEGEKFAGGRKK-KRIVHEIHLPLLRHSPKTGIESEGSQNSNNKIKTPHVVLKNSSTRKPIRPSSS------KYRGVRQ
        R +R+   DPDATDSSS   E+E ++F   R++ K+ V+E++L        +G    GS       K     +K+ ST  P+  +++      K+RGVRQ
Subjt:  RKVRVICYDPDATDSSS--SEDEGEKFAGGRKK-KRIVHEIHLPLLRHSPKTGIESEGSQNSNNKIKTPHVVLKNSSTRKPIRPSSS------KYRGVRQ

Query:  RTWGKWAAEIRDPFKKARVWLGTYDTAEEASQAYE
        R WGKWAAEIRDP K+ R+WLGTY+TAEEA+  Y+
Subjt:  RTWGKWAAEIRDPFKKARVWLGTYDTAEEASQAYE

Arabidopsis top hitse value%identityAlignment
AT1G68550.1 Integrase-type DNA-binding superfamily protein1.4e-2649.63Show/hide
Query:  RKVRVICYDPDATDSSSSEDEGEKFAGGRKKKRIVHEIHLPLLRHSPKTGIESEGSQNSNNKIKTPHVVLKNSSTRKPIRPSSSKYRGVRQRTWGKWAAE
        RKVR+I  DP ATD SSS++E  K    RK KRIV EI+ P +  S     E     +S +  KT   +  ++S   P      K  GVRQR WGKWAAE
Subjt:  RKVRVICYDPDATDSSSSEDEGEKFAGGRKKKRIVHEIHLPLLRHSPKTGIESEGSQNSNNKIKTPHVVLKNSSTRKPIRPSSSKYRGVRQRTWGKWAAE

Query:  IRDPFKKARVWLGTYDTAEEASQAYELKRLEFEAM
        IRDP KK R WLGT+DT EEA++AY+ K+LEF+A+
Subjt:  IRDPFKKARVWLGTYDTAEEASQAYELKRLEFEAM

AT1G68550.2 Integrase-type DNA-binding superfamily protein1.4e-2649.63Show/hide
Query:  RKVRVICYDPDATDSSSSEDEGEKFAGGRKKKRIVHEIHLPLLRHSPKTGIESEGSQNSNNKIKTPHVVLKNSSTRKPIRPSSSKYRGVRQRTWGKWAAE
        RKVR+I  DP ATD SSS++E  K    RK KRIV EI+ P +  S     E     +S +  KT   +  ++S   P      K  GVRQR WGKWAAE
Subjt:  RKVRVICYDPDATDSSSSEDEGEKFAGGRKKKRIVHEIHLPLLRHSPKTGIESEGSQNSNNKIKTPHVVLKNSSTRKPIRPSSSKYRGVRQRTWGKWAAE

Query:  IRDPFKKARVWLGTYDTAEEASQAYELKRLEFEAM
        IRDP KK R WLGT+DT EEA++AY+ K+LEF+A+
Subjt:  IRDPFKKARVWLGTYDTAEEASQAYELKRLEFEAM

AT3G25890.1 Integrase-type DNA-binding superfamily protein3.7e-2245.14Show/hide
Query:  RKVRVICYDPDATDSSSSEDEGEKFAGGRKKKRIVHEIHLPLLRHSPKTGIESEGSQNSNN------KIKTPHVVLKNSSTRKPIRPSS---SKYRGVRQ
        RK+R +  DP ATD SSSE+E       +++KR V EI LP  + + +   ES   Q SNN      KI      +  S     +  SS   SK  GVRQ
Subjt:  RKVRVICYDPDATDSSSSEDEGEKFAGGRKKKRIVHEIHLPLLRHSPKTGIESEGSQNSNN------KIKTPHVVLKNSSTRKPIRPSS---SKYRGVRQ

Query:  RTWGKWAAEIRDPFKKARVWLGTYDTAEEASQAYELKRLEFEAM
        R WGKWAAEIR P  K R WLGTY+T E+A+ AY  K+LEF+A+
Subjt:  RTWGKWAAEIRDPFKKARVWLGTYDTAEEASQAYELKRLEFEAM

AT3G25890.2 Integrase-type DNA-binding superfamily protein3.7e-2245.14Show/hide
Query:  RKVRVICYDPDATDSSSSEDEGEKFAGGRKKKRIVHEIHLPLLRHSPKTGIESEGSQNSNN------KIKTPHVVLKNSSTRKPIRPSS---SKYRGVRQ
        RK+R +  DP ATD SSSE+E       +++KR V EI LP  + + +   ES   Q SNN      KI      +  S     +  SS   SK  GVRQ
Subjt:  RKVRVICYDPDATDSSSSEDEGEKFAGGRKKKRIVHEIHLPLLRHSPKTGIESEGSQNSNN------KIKTPHVVLKNSSTRKPIRPSS---SKYRGVRQ

Query:  RTWGKWAAEIRDPFKKARVWLGTYDTAEEASQAYELKRLEFEAM
        R WGKWAAEIR P  K R WLGTY+T E+A+ AY  K+LEF+A+
Subjt:  RTWGKWAAEIRDPFKKARVWLGTYDTAEEASQAYELKRLEFEAM

AT5G53290.1 cytokinin response factor 31.4e-2141.09Show/hide
Query:  RKVRVICYDPDATDSSSSEDEGEKFAGGRKKKRIVHEIHLPLLRHSPKTGIESEGSQ---NSNNKIKTPHVVLKNSSTRKPIRPSSSKYRGVRQRTWGKW
        +KV +   DPDATDSSS EDE +     R+ KR V+EI +    ++  TG+  +  +   +S+++ ++P    +  + +  +     K+RGVRQR WGKW
Subjt:  RKVRVICYDPDATDSSSSEDEGEKFAGGRKKKRIVHEIHLPLLRHSPKTGIESEGSQ---NSNNKIKTPHVVLKNSSTRKPIRPSSSKYRGVRQRTWGKW

Query:  AAEIRDPFKKARVWLGTYDTAEEASQAYE
        AAEIRDP ++ R+WLGT++TAEEA+  Y+
Subjt:  AAEIRDPFKKARVWLGTYDTAEEASQAYE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGAAAAGTTCGGGTAATTTGTTACGATCCTGATGCAACGGATTCGTCTTCAAGCGAAGACGAGGGAGAAAAATTCGCAGGAGGAAGGAAGAAAAAGCGAATCGTACACGA
AATCCACCTCCCTTTACTCCGTCATTCGCCAAAAACGGGTATTGAATCTGAGGGTTCTCAGAACAGCAACAACAAGATCAAAACCCCCCATGTTGTGTTGAAAAATTCGT
CCACTCGAAAACCCATTCGTCCGTCTTCTTCGAAATACAGAGGAGTGAGGCAGCGGACTTGGGGGAAATGGGCGGCGGAGATTCGAGATCCCTTTAAGAAAGCTCGTGTT
TGGCTTGGCACTTACGATACTGCTGAAGAAGCTTCCCAAGCTTACGAGTTGAAGAGGCTGGAGTTTGAAGCTATG
mRNA sequenceShow/hide mRNA sequence
AGAAAAGTTCGGGTAATTTGTTACGATCCTGATGCAACGGATTCGTCTTCAAGCGAAGACGAGGGAGAAAAATTCGCAGGAGGAAGGAAGAAAAAGCGAATCGTACACGA
AATCCACCTCCCTTTACTCCGTCATTCGCCAAAAACGGGTATTGAATCTGAGGGTTCTCAGAACAGCAACAACAAGATCAAAACCCCCCATGTTGTGTTGAAAAATTCGT
CCACTCGAAAACCCATTCGTCCGTCTTCTTCGAAATACAGAGGAGTGAGGCAGCGGACTTGGGGGAAATGGGCGGCGGAGATTCGAGATCCCTTTAAGAAAGCTCGTGTT
TGGCTTGGCACTTACGATACTGCTGAAGAAGCTTCCCAAGCTTACGAGTTGAAGAGGCTGGAGTTTGAAGCTATG
Protein sequenceShow/hide protein sequence
RKVRVICYDPDATDSSSSEDEGEKFAGGRKKKRIVHEIHLPLLRHSPKTGIESEGSQNSNNKIKTPHVVLKNSSTRKPIRPSSSKYRGVRQRTWGKWAAEIRDPFKKARV
WLGTYDTAEEASQAYELKRLEFEAM