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MS015341 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015341
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionFYR C-terminal domain-containing protein
Genome locationscaffold2:2712235..2712432
RNA-Seq ExpressionMS015341
SyntenyMS015341
Gene Ontology termsGO:0005634 - nucleus (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022150652.1 uncharacterized protein LOC111018735 isoform X1 [Momordica charantia]8.1e-2586.36Show/hide
Query:  SSKNTEEHWSLQSKDNAIWLLALTISDSYDSHDYPPNDCQINHEGLWKLALLVNNTVTFGAELDLR
        SSKNTEEH SLQ KD AIWLLA TISDSYDSHDY PNDCQINHEGLWKLALL N+TVTFG E+DLR
Subjt:  SSKNTEEHWSLQSKDNAIWLLALTISDSYDSHDYPPNDCQINHEGLWKLALLVNNTVTFGAELDLR

XP_022968243.1 uncharacterized protein LOC111467538 isoform X1 [Cucurbita maxima]7.6e-1566.67Show/hide
Query:  SSKNTEEHWSLQSKDNAIWLLALTISDSYDSHDYPPNDCQINHEGLWKLALLVNNTVTFGAELDLR
        SS   +EH SLQ KD AIWL A T SDS D H+Y P  CQ NH  LWKL LL N+TVTFGAELDLR
Subjt:  SSKNTEEHWSLQSKDNAIWLLALTISDSYDSHDYPPNDCQINHEGLWKLALLVNNTVTFGAELDLR

XP_022968244.1 uncharacterized protein LOC111467538 isoform X2 [Cucurbita maxima]7.6e-1566.67Show/hide
Query:  SSKNTEEHWSLQSKDNAIWLLALTISDSYDSHDYPPNDCQINHEGLWKLALLVNNTVTFGAELDLR
        SS   +EH SLQ KD AIWL A T SDS D H+Y P  CQ NH  LWKL LL N+TVTFGAELDLR
Subjt:  SSKNTEEHWSLQSKDNAIWLLALTISDSYDSHDYPPNDCQINHEGLWKLALLVNNTVTFGAELDLR

XP_023542997.1 uncharacterized protein LOC111802747 isoform X2 [Cucurbita pepo subsp. pepo]7.6e-1566.67Show/hide
Query:  SSKNTEEHWSLQSKDNAIWLLALTISDSYDSHDYPPNDCQINHEGLWKLALLVNNTVTFGAELDLR
        SS   +EH SLQ KD AIWL A T SDS D H+Y P  CQ NH  LWKL LL N+TVTFGAELDLR
Subjt:  SSKNTEEHWSLQSKDNAIWLLALTISDSYDSHDYPPNDCQINHEGLWKLALLVNNTVTFGAELDLR

XP_023542998.1 uncharacterized protein LOC111802747 isoform X3 [Cucurbita pepo subsp. pepo]7.6e-1566.67Show/hide
Query:  SSKNTEEHWSLQSKDNAIWLLALTISDSYDSHDYPPNDCQINHEGLWKLALLVNNTVTFGAELDLR
        SS   +EH SLQ KD AIWL A T SDS D H+Y P  CQ NH  LWKL LL N+TVTFGAELDLR
Subjt:  SSKNTEEHWSLQSKDNAIWLLALTISDSYDSHDYPPNDCQINHEGLWKLALLVNNTVTFGAELDLR

TrEMBL top hitse value%identityAlignment
A0A6J1DBA8 uncharacterized protein LOC111018735 isoform X13.9e-2586.36Show/hide
Query:  SSKNTEEHWSLQSKDNAIWLLALTISDSYDSHDYPPNDCQINHEGLWKLALLVNNTVTFGAELDLR
        SSKNTEEH SLQ KD AIWLLA TISDSYDSHDY PNDCQINHEGLWKLALL N+TVTFG E+DLR
Subjt:  SSKNTEEHWSLQSKDNAIWLLALTISDSYDSHDYPPNDCQINHEGLWKLALLVNNTVTFGAELDLR

A0A6J1G291 uncharacterized protein LOC1114499933.7e-1566.67Show/hide
Query:  SSKNTEEHWSLQSKDNAIWLLALTISDSYDSHDYPPNDCQINHEGLWKLALLVNNTVTFGAELDLR
        SS   +EH SLQ KD AIWL A T SDS D H+Y P  CQ NH  LWKL LL N+TVTFGAELDLR
Subjt:  SSKNTEEHWSLQSKDNAIWLLALTISDSYDSHDYPPNDCQINHEGLWKLALLVNNTVTFGAELDLR

A0A6J1HWP5 uncharacterized protein LOC111467538 isoform X33.7e-1566.67Show/hide
Query:  SSKNTEEHWSLQSKDNAIWLLALTISDSYDSHDYPPNDCQINHEGLWKLALLVNNTVTFGAELDLR
        SS   +EH SLQ KD AIWL A T SDS D H+Y P  CQ NH  LWKL LL N+TVTFGAELDLR
Subjt:  SSKNTEEHWSLQSKDNAIWLLALTISDSYDSHDYPPNDCQINHEGLWKLALLVNNTVTFGAELDLR

A0A6J1HXG7 uncharacterized protein LOC111467538 isoform X13.7e-1566.67Show/hide
Query:  SSKNTEEHWSLQSKDNAIWLLALTISDSYDSHDYPPNDCQINHEGLWKLALLVNNTVTFGAELDLR
        SS   +EH SLQ KD AIWL A T SDS D H+Y P  CQ NH  LWKL LL N+TVTFGAELDLR
Subjt:  SSKNTEEHWSLQSKDNAIWLLALTISDSYDSHDYPPNDCQINHEGLWKLALLVNNTVTFGAELDLR

A0A6J1HZ35 uncharacterized protein LOC111467538 isoform X23.7e-1566.67Show/hide
Query:  SSKNTEEHWSLQSKDNAIWLLALTISDSYDSHDYPPNDCQINHEGLWKLALLVNNTVTFGAELDLR
        SS   +EH SLQ KD AIWL A T SDS D H+Y P  CQ NH  LWKL LL N+TVTFGAELDLR
Subjt:  SSKNTEEHWSLQSKDNAIWLLALTISDSYDSHDYPPNDCQINHEGLWKLALLVNNTVTFGAELDLR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGCTCAAAAAACACTGAGGAACATTGGTCACTTCAGTCAAAGGACAATGCCATATGGCTTTTAGCCTTAACCATATCTGATTCTTATGATTCGCATGACTATCCACCAAA
TGATTGTCAGATAAATCATGAAGGATTATGGAAACTAGCTCTACTTGTTAACAACACGGTTACATTTGGTGCAGAGCTGGATTTGAGG
mRNA sequenceShow/hide mRNA sequence
AGCTCAAAAAACACTGAGGAACATTGGTCACTTCAGTCAAAGGACAATGCCATATGGCTTTTAGCCTTAACCATATCTGATTCTTATGATTCGCATGACTATCCACCAAA
TGATTGTCAGATAAATCATGAAGGATTATGGAAACTAGCTCTACTTGTTAACAACACGGTTACATTTGGTGCAGAGCTGGATTTGAGG
Protein sequenceShow/hide protein sequence
SSKNTEEHWSLQSKDNAIWLLALTISDSYDSHDYPPNDCQINHEGLWKLALLVNNTVTFGAELDLR