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MS015344 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015344
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold2:2737074..2737257
RNA-Seq ExpressionMS015344
SyntenyMS015344
Gene Ontology termsGO:0015031 - protein transport (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
VVA33529.1 PREDICTED: IST1 [Prunus dulcis]3.7e-1689.8Show/hide
Query:  HDFRLRNGDPMHAPIW--RPHPPIVFFFEFRLFSIVSTFGIGLTLEGPT
        HDFRLRNGDPMHAPIW  RPH PIVFFFEFRLFSIVS FGIGLTL+GPT
Subjt:  HDFRLRNGDPMHAPIW--RPHPPIVFFFEFRLFSIVSTFGIGLTLEGPT
WP_131796640.1 DUF4283 domain-containing protein [Candidatus Frankia datiscae]8.2e-1689.8Show/hide
Query:  HDFRLRNGDPMHAPIW--RPHPPIVFFFEFRLFSIVSTFGIGLTLEGPT
        HDFRLRNGDPMHAPIW  RPH P VFFFEF LFSIVSTFGIGLTLEGPT
Subjt:  HDFRLRNGDPMHAPIW--RPHPPIVFFFEFRLFSIVSTFGIGLTLEGPT
TrEMBL top hitse value%identityAlignment
A0A5A7UWF6 Uncharacterized protein7.7e-0468.18Show/hide
Query:  RPHPPIVFFFEFRLFSIVSTFGIGLTLEGPT--ISKQTLTIKLG
        R HPPIVFFF    F  VSTFGIGLTLEGPT  +S+  L IKLG
Subjt:  RPHPPIVFFFEFRLFSIVSTFGIGLTLEGPT--ISKQTLTIKLG
A0A5D3BZC3 Uncharacterized protein7.7e-0468.18Show/hide
Query:  RPHPPIVFFFEFRLFSIVSTFGIGLTLEGPT--ISKQTLTIKLG
        R HPPIVFFF    F  VSTFGIGLTLEGPT  +S+  L IKLG
Subjt:  RPHPPIVFFFEFRLFSIVSTFGIGLTLEGPT--ISKQTLTIKLG
A0A5E4G1B8 PREDICTED: IST11.8e-1689.8Show/hide
Query:  HDFRLRNGDPMHAPIW--RPHPPIVFFFEFRLFSIVSTFGIGLTLEGPT
        HDFRLRNGDPMHAPIW  RPH PIVFFFEFRLFSIVS FGIGLTL+GPT
Subjt:  HDFRLRNGDPMHAPIW--RPHPPIVFFFEFRLFSIVSTFGIGLTLEGPT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CATGATTTCCGTCTCCGCAATGGTGATCCAATGCATGCGCCTATTTGGCGACCCCATCCGCCTATTGTCTTCTTCTTTGAGTTTCGCCTATTTTCTATCGTCTCGACTTT
CGGAATTGGCCTGACCCTTGAAGGTCCTACGATATCAAAACAAACTCTCACAATAAAGCTAGGGTTTGTG
mRNA sequenceShow/hide mRNA sequence
CATGATTTCCGTCTCCGCAATGGTGATCCAATGCATGCGCCTATTTGGCGACCCCATCCGCCTATTGTCTTCTTCTTTGAGTTTCGCCTATTTTCTATCGTCTCGACTTT
CGGAATTGGCCTGACCCTTGAAGGTCCTACGATATCAAAACAAACTCTCACAATAAAGCTAGGGTTTGTG
Protein sequenceShow/hide protein sequence
HDFRLRNGDPMHAPIWRPHPPIVFFFEFRLFSIVSTFGIGLTLEGPTISKQTLTIKLGFV