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MS015348 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015348
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionClavata3/esr-related 43, putative
Genome locationscaffold2:2755151..2755426
RNA-Seq ExpressionMS015348
SyntenyMS015348
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR040274 - CLAVATA3/ESR (CLE)-related protein 27/43


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573960.1 CLAVATA3/ESR (CLE)-related protein 27, partial [Cucurbita argyrosperma subsp. sororia]9.3e-1959.62Show/hide
Query:  MCTRRSAAVSSSASSFAILILILWVSQIWV-CSHCQARASRIL-------PPPLTGDAKHDASGKNELVQKYLRGRA----SDRHEGFEDSKRRVPSCPD
        MCTRR AA    +SSFAILILILWVSQIWV C   QARASRI        PPP T D    A+ + EL+QKY + RA       HEGF DSKR++PSCPD
Subjt:  MCTRRSAAVSSSASSFAILILILWVSQIWV-CSHCQARASRIL-------PPPLTGDAKHDASGKNELVQKYLRGRA----SDRHEGFEDSKRRVPSCPD

Query:  PLHN
        PLHN
Subjt:  PLHN

KAG6601288.1 CLAVATA3/ESR (CLE)-related protein 43, partial [Cucurbita argyrosperma subsp. sororia]1.9e-2766.67Show/hide
Query:  MCTRRSAAVSSSASSFAILILILWVSQIWVCSHCQARASRILPPP--------LTGDAKH--DASGKNELVQKYLRGRASDRH---EGFEDSKRRVPSCP
        MCTRR A  +SS+SSFA+LI ILWVSQIWVCSHCQARASRI PPP        LTGD K+  +A+ + EL++KY +G+A DRH   EGFEDSKRR+PSCP
Subjt:  MCTRRSAAVSSSASSFAILILILWVSQIWVCSHCQARASRILPPP--------LTGDAKH--DASGKNELVQKYLRGRASDRH---EGFEDSKRRVPSCP

Query:  DPLHN
        DPLHN
Subjt:  DPLHN

KAG7032076.1 CLAVATA3/ESR (CLE)-related protein 43, partial [Cucurbita argyrosperma subsp. argyrosperma]1.9e-2766.67Show/hide
Query:  MCTRRSAAVSSSASSFAILILILWVSQIWVCSHCQARASRILPPP--------LTGDAKH--DASGKNELVQKYLRGRASDRH---EGFEDSKRRVPSCP
        MCTRR A  +SS+SSFA+LI ILWVSQIWVCSHCQARASRI PPP        LTGD K+  +A+ + EL++KY +G+A DRH   EGFEDSKRR+PSCP
Subjt:  MCTRRSAAVSSSASSFAILILILWVSQIWVCSHCQARASRILPPP--------LTGDAKH--DASGKNELVQKYLRGRASDRH---EGFEDSKRRVPSCP

Query:  DPLHN
        DPLHN
Subjt:  DPLHN

KGN52083.1 hypothetical protein Csa_008231 [Cucumis sativus]1.5e-2463.73Show/hide
Query:  SAAVSSSASSFAILILILWVSQIWVCSHCQARASRILPPP------------LTGDAKHDASGKNELVQKYLRGRASDRH---EGFEDSKRRVPSCPDPL
        +++ SSS S+FAILILILWVSQIWVC HCQARASRI PPP            L+G+ K +A  KN+L+QKY  GRA DRH   EGFEDSKR++PSCPDPL
Subjt:  SAAVSSSASSFAILILILWVSQIWVCSHCQARASRILPPP------------LTGDAKHDASGKNELVQKYLRGRASDRH---EGFEDSKRRVPSCPDPL

Query:  HN
        HN
Subjt:  HN

XP_022150497.1 uncharacterized protein LOC111018633 [Momordica charantia]2.1e-3996.59Show/hide
Query:  MCTRRSAAVSSSASSFAILILILWVSQIWVCSHCQARASRILPPPLTGDAKHDASGKNELVQKYLRGRASDRHEGFEDSKRRVPSCPD
        MCTRR AAVSSSASSFAILILILWVSQIWVC HCQARASRILPPPLTGDAKHDASGKNELVQKYLRGRASDRHEGFEDSKRRVPSC D
Subjt:  MCTRRSAAVSSSASSFAILILILWVSQIWVCSHCQARASRILPPPLTGDAKHDASGKNELVQKYLRGRASDRHEGFEDSKRRVPSCPD

TrEMBL top hitse value%identityAlignment
A0A061E6F8 Clavata3/esr-related 43, putative7.7e-1147.67Show/hide
Query:  SFAILILILWVSQIWVCSHCQARASRILP-----PPLTGDAKHDASGKNELVQKYLRGRA---SDRHEGFEDSKRRVPSCPDPLHN
        S  +++LI++  QIWVC  C+A A RILP              D  GK +L QKY  GR+   +    GFE+SKRRVPSCPDPLHN
Subjt:  SFAILILILWVSQIWVCSHCQARASRILP-----PPLTGDAKHDASGKNELVQKYLRGRA---SDRHEGFEDSKRRVPSCPDPLHN

A0A0A0KR66 Uncharacterized protein7.2e-2563.73Show/hide
Query:  SAAVSSSASSFAILILILWVSQIWVCSHCQARASRILPPP------------LTGDAKHDASGKNELVQKYLRGRASDRH---EGFEDSKRRVPSCPDPL
        +++ SSS S+FAILILILWVSQIWVC HCQARASRI PPP            L+G+ K +A  KN+L+QKY  GRA DRH   EGFEDSKR++PSCPDPL
Subjt:  SAAVSSSASSFAILILILWVSQIWVCSHCQARASRILPPP------------LTGDAKHDASGKNELVQKYLRGRASDRH---EGFEDSKRRVPSCPDPL

Query:  HN
        HN
Subjt:  HN

A0A2C9VNI0 Uncharacterized protein2.2e-1043.56Show/hide
Query:  TRRSAAVSSSASSFAILILILWVSQIWVCSHCQARASRILPP-PLTGDAKH-------DASGKNELVQKYLRGRAS---DRHEGFEDSKRRVPSCPDPLH
        +RRS   SSS    A+++ ++++ QIWVCS C+A A RI P   +    KH       + + K +L++K+  GRAS      +GFE++KRRVPSCPDPLH
Subjt:  TRRSAAVSSSASSFAILILILWVSQIWVCSHCQARASRILPP-PLTGDAKH-------DASGKNELVQKYLRGRAS---DRHEGFEDSKRRVPSCPDPLH

Query:  N
        N
Subjt:  N

A0A6J1DAV9 uncharacterized protein LOC1110186331.0e-3996.59Show/hide
Query:  MCTRRSAAVSSSASSFAILILILWVSQIWVCSHCQARASRILPPPLTGDAKHDASGKNELVQKYLRGRASDRHEGFEDSKRRVPSCPD
        MCTRR AAVSSSASSFAILILILWVSQIWVC HCQARASRILPPPLTGDAKHDASGKNELVQKYLRGRASDRHEGFEDSKRRVPSC D
Subjt:  MCTRRSAAVSSSASSFAILILILWVSQIWVCSHCQARASRILPPPLTGDAKHDASGKNELVQKYLRGRASDRHEGFEDSKRRVPSCPD

A0A7J9GML7 Uncharacterized protein8.5e-1048.75Show/hide
Query:  ILILILWVSQIWVCSHCQARASRILPPPLTGDAKHDASGKNELVQKYLRG-----RASDRHEGFEDSKRRVPSCPDPLHN
        +++LI+ V QIW+CS C+A A+R+ P    G+       + EL Q Y  G     + SD+  GFEDSKRRVPSCPDPLHN
Subjt:  ILILILWVSQIWVCSHCQARASRILPPPLTGDAKHDASGKNELVQKYLRG-----RASDRHEGFEDSKRRVPSCPDPLHN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G25425.1 CLAVATA3/ESR-RELATED 435.3e-0430.11Show/hide
Query:  SFAILILILWVSQIWVCSHCQARASRILP------------PPLTGDAKHDASGKNELVQKYLRGRA---SDRHEGFEDSKRRVPSCPDPLHN
        +F++ +L++ + QIW+      R  R +P              +T   K+       L Q+Y +GR+   ++ +  FEDS RR+PS PD LHN
Subjt:  SFAILILILWVSQIWVCSHCQARASRILP------------PPLTGDAKHDASGKNELVQKYLRGRA---SDRHEGFEDSKRRVPSCPDPLHN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTACCAGAAGAAGCGCCGCCGTCTCCTCCTCCGCCTCTTCTTTTGCCATTCTAATCTTGATCCTCTGGGTGTCGCAGATTTGGGTCTGCTCCCACTGCCAAGCTAG
AGCTTCTCGGATTCTCCCGCCGCCGCTCACCGGCGACGCAAAACACGATGCCAGCGGCAAAAATGAACTTGTCCAGAAATATTTGAGAGGAAGAGCTTCCGATCGCCACG
AAGGATTCGAAGACAGCAAACGGAGAGTACCCAGTTGTCCAGATCCTCTCCACAAT
mRNA sequenceShow/hide mRNA sequence
ATGTGTACCAGAAGAAGCGCCGCCGTCTCCTCCTCCGCCTCTTCTTTTGCCATTCTAATCTTGATCCTCTGGGTGTCGCAGATTTGGGTCTGCTCCCACTGCCAAGCTAG
AGCTTCTCGGATTCTCCCGCCGCCGCTCACCGGCGACGCAAAACACGATGCCAGCGGCAAAAATGAACTTGTCCAGAAATATTTGAGAGGAAGAGCTTCCGATCGCCACG
AAGGATTCGAAGACAGCAAACGGAGAGTACCCAGTTGTCCAGATCCTCTCCACAAT
Protein sequenceShow/hide protein sequence
MCTRRSAAVSSSASSFAILILILWVSQIWVCSHCQARASRILPPPLTGDAKHDASGKNELVQKYLRGRASDRHEGFEDSKRRVPSCPDPLHN