; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS015349 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015349
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRibulose bisphosphate carboxylase small subunit
Genome locationscaffold2:2762429..2763136
RNA-Seq ExpressionMS015349
SyntenyMS015349
Gene Ontology termsGO:0009853 - photorespiration (biological process)
GO:0015977 - carbon fixation (biological process)
GO:0015979 - photosynthesis (biological process)
GO:0009506 - plasmodesma (cellular component)
GO:0009536 - plastid (cellular component)
InterPro domainsIPR000894 - Ribulose bisphosphate carboxylase small subunit, domain
IPR024680 - Ribulose-1,5-bisphosphate carboxylase small subunit, N-terminal
IPR024681 - Ribulose bisphosphate carboxylase, small subunit
IPR036385 - Ribulose bisphosphate carboxylase, small subunit superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022150468.1 ribulose bisphosphate carboxylase small chain, chloroplastic-like [Momordica charantia]2.8e-9697.79Show/hide
Query:  ASSSIVSSAAVASVNRASPAQASMVAPFTGLKSAAAFPVTRKTNDITTLANNGGRVQCMKVWPPLGKKKFETLSYLPDMTESQLLKEIDYLLRSGWIACV
        ASSSIVSSAAVASVNRASPAQASMVAPFTGLKSAAAFPVTRKTNDITTLANNGGRVQCMKVWPPLGKKKFETLSYLPDMTE+QLLKEIDYL+RSGWI C+
Subjt:  ASSSIVSSAAVASVNRASPAQASMVAPFTGLKSAAAFPVTRKTNDITTLANNGGRVQCMKVWPPLGKKKFETLSYLPDMTESQLLKEIDYLLRSGWIACV

Query:  EFELEHGFVYREHHKSPGYYDGRYWTMWKLPMYGCTDASQVVKEIEEAKKEYPSAFIRVIGFDNKRQVQCISFIVYKPSSY
        EFELEHGFVYREHHKSPGYYDGRYWTMWKLPMYGCTDASQVVKEIEEAKKEYPSAFIRVIGFDNKRQVQCISFIVYKPSSY
Subjt:  EFELEHGFVYREHHKSPGYYDGRYWTMWKLPMYGCTDASQVVKEIEEAKKEYPSAFIRVIGFDNKRQVQCISFIVYKPSSY

XP_022957356.1 ribulose bisphosphate carboxylase small chain, chloroplastic-like [Cucurbita moschata]3.6e-8385.56Show/hide
Query:  SSSIVSSAAVASVNRASPAQASMVAPFTGLKSAAAFPVTRKTNDITTLANNGGRVQCMKVWPPLGKKKFETLSYLPDMTESQLLKEIDYLLRSGWIACVE
        +SSIVSSAAVASVNRASPAQASMVAPF GLKS AAFPVTRK NDITTLA+NG RV+CMKVWPPLG KKFETLSYLPD+T  QLLKEI YLLRSGW+ C+E
Subjt:  SSSIVSSAAVASVNRASPAQASMVAPFTGLKSAAAFPVTRKTNDITTLANNGGRVQCMKVWPPLGKKKFETLSYLPDMTESQLLKEIDYLLRSGWIACVE

Query:  FELEHGFVYREHHKSPGYYDGRYWTMWKLPMYGCTDASQVVKEIEEAKKEYPSAFIRVIGFDNKRQVQCISFIVYKPSSY
        FELE GFVYRE+H+SPGYYDGRYWTMWKLPM+GCTD +QV  EIEEAKKEYP+AFIRVIGFDN RQVQCISFIVYKP SY
Subjt:  FELEHGFVYREHHKSPGYYDGRYWTMWKLPMYGCTDASQVVKEIEEAKKEYPSAFIRVIGFDNKRQVQCISFIVYKPSSY

XP_022986878.1 ribulose bisphosphate carboxylase small chain, chloroplastic-like [Cucurbita maxima]4.7e-8384.44Show/hide
Query:  SSSIVSSAAVASVNRASPAQASMVAPFTGLKSAAAFPVTRKTNDITTLANNGGRVQCMKVWPPLGKKKFETLSYLPDMTESQLLKEIDYLLRSGWIACVE
        +SSIVSSAAVASVNRASPAQASMVAPF GLKS AAFPVTRK NDITTLA+NG RV+CMKVWPPLG KKFETLSYLPD++++QLLKEI YLLRSGW+ C+E
Subjt:  SSSIVSSAAVASVNRASPAQASMVAPFTGLKSAAAFPVTRKTNDITTLANNGGRVQCMKVWPPLGKKKFETLSYLPDMTESQLLKEIDYLLRSGWIACVE

Query:  FELEHGFVYREHHKSPGYYDGRYWTMWKLPMYGCTDASQVVKEIEEAKKEYPSAFIRVIGFDNKRQVQCISFIVYKPSSY
        FELE GFVYRE+H+SPGYYDGRYWTMWKLPM+GCTD +QV  EIEEAKKEYP+AFIRVIGFDN RQVQCISFIVYKP++Y
Subjt:  FELEHGFVYREHHKSPGYYDGRYWTMWKLPMYGCTDASQVVKEIEEAKKEYPSAFIRVIGFDNKRQVQCISFIVYKPSSY

XP_023513414.1 ribulose bisphosphate carboxylase small chain, chloroplastic-like [Cucurbita pepo subsp. pepo]1.1e-8285Show/hide
Query:  SSSIVSSAAVASVNRASPAQASMVAPFTGLKSAAAFPVTRKTNDITTLANNGGRVQCMKVWPPLGKKKFETLSYLPDMTESQLLKEIDYLLRSGWIACVE
        +SSIVSSAAVASVNRASPAQASMVAPF GLKS A FPVTRK NDITTLA+NG RV+CMKVWPPLG KKFETLSYLPD+T  QLLKEI YLLRSGW+ C+E
Subjt:  SSSIVSSAAVASVNRASPAQASMVAPFTGLKSAAAFPVTRKTNDITTLANNGGRVQCMKVWPPLGKKKFETLSYLPDMTESQLLKEIDYLLRSGWIACVE

Query:  FELEHGFVYREHHKSPGYYDGRYWTMWKLPMYGCTDASQVVKEIEEAKKEYPSAFIRVIGFDNKRQVQCISFIVYKPSSY
        FELE GFVYRE+H+SPGYYDGRYWTMWKLPM+GCTD +QV  EIEEAKKEYP+AFIRVIGFDN RQVQCISFIVYKP+SY
Subjt:  FELEHGFVYREHHKSPGYYDGRYWTMWKLPMYGCTDASQVVKEIEEAKKEYPSAFIRVIGFDNKRQVQCISFIVYKPSSY

XP_038892640.1 ribulose bisphosphate carboxylase small chain, chloroplastic-like [Benincasa hispida]3.6e-8383.33Show/hide
Query:  SSSIVSSAAVASVNRASPAQASMVAPFTGLKSAAAFPVTRKTNDITTLANNGGRVQCMKVWPPLGKKKFETLSYLPDMTESQLLKEIDYLLRSGWIACVE
        +SSIVSSAAVASVNRASPAQASMVAPFTGLKSAAAFP+TRK NDITTLA+NGGRVQCMKVWPPLG KKFETLSYLPD+ E+QL KE++YLLR GW+ C+E
Subjt:  SSSIVSSAAVASVNRASPAQASMVAPFTGLKSAAAFPVTRKTNDITTLANNGGRVQCMKVWPPLGKKKFETLSYLPDMTESQLLKEIDYLLRSGWIACVE

Query:  FELEHGFVYREHHKSPGYYDGRYWTMWKLPMYGCTDASQVVKEIEEAKKEYPSAFIRVIGFDNKRQVQCISFIVYKPSSY
        F++  GFVYRE+H+SPGYYDGRYWTMWKLPM+GCTDA+QV+KEI EAKKEYP AFIRVIGFDN RQVQCISFIVYKP  +
Subjt:  FELEHGFVYREHHKSPGYYDGRYWTMWKLPMYGCTDASQVVKEIEEAKKEYPSAFIRVIGFDNKRQVQCISFIVYKPSSY

TrEMBL top hitse value%identityAlignment
A0A1R3FZH6 Ribulose bisphosphate carboxylase small subunit2.5e-8281.77Show/hide
Query:  SSSIVSSAAVASVNRASPAQASMVAPFTGLKSAAAFPVTRKT-NDITTLANNGGRVQCMKVWPPLGKKKFETLSYLPDMTESQLLKEIDYLLRSGWIACV
        +SS+VSSA +AS  RASPAQASMVAPFTGLKS++AFPVTRK+ NDIT+LA+NGGRVQCMKVWPP+GKKKFETLSYLPD+T  QL KE+DYLLRSGWI C+
Subjt:  SSSIVSSAAVASVNRASPAQASMVAPFTGLKSAAAFPVTRKT-NDITTLANNGGRVQCMKVWPPLGKKKFETLSYLPDMTESQLLKEIDYLLRSGWIACV

Query:  EFELEHGFVYREHHKSPGYYDGRYWTMWKLPMYGCTDASQVVKEIEEAKKEYPSAFIRVIGFDNKRQVQCISFIVYKPSSY
        EFELEHGFVYRE+H+SPGYYDGRYWTMWKLPM+GCTD+SQV+KE+EEAKKEYP+AFIR+IGF NKRQVQCISFI YKP ++
Subjt:  EFELEHGFVYREHHKSPGYYDGRYWTMWKLPMYGCTDASQVVKEIEEAKKEYPSAFIRVIGFDNKRQVQCISFIVYKPSSY

A0A5D3CCQ3 Ribulose bisphosphate carboxylase small subunit4.3e-8283.33Show/hide
Query:  SSSIVSSAAVASVNRASPAQASMVAPFTGLKSAAAFPVTRKTNDITTLANNGGRVQCMKVWPPLGKKKFETLSYLPDMTESQLLKEIDYLLRSGWIACVE
        +SSI+SSAAVASVN ASPAQASMVAPFTGLKSAAAFPVTRK NDITTLA+NGGRVQCMKVWPPLG KKFETLSYLPDM+  QL KE+DYLLR GWI C+E
Subjt:  SSSIVSSAAVASVNRASPAQASMVAPFTGLKSAAAFPVTRKTNDITTLANNGGRVQCMKVWPPLGKKKFETLSYLPDMTESQLLKEIDYLLRSGWIACVE

Query:  FELEHGFVYREHHKSPGYYDGRYWTMWKLPMYGCTDASQVVKEIEEAKKEYPSAFIRVIGFDNKRQVQCISFIVYKPSSY
        F++  GFVYRE+H+SPGYYDGRYWTMWKLPM+GCTD+SQVV EIEEAKKEYP A+IRVIGFDN RQVQCISFI YKP  +
Subjt:  FELEHGFVYREHHKSPGYYDGRYWTMWKLPMYGCTDASQVVKEIEEAKKEYPSAFIRVIGFDNKRQVQCISFIVYKPSSY

A0A6J1D9J4 Ribulose bisphosphate carboxylase small subunit1.4e-9697.79Show/hide
Query:  ASSSIVSSAAVASVNRASPAQASMVAPFTGLKSAAAFPVTRKTNDITTLANNGGRVQCMKVWPPLGKKKFETLSYLPDMTESQLLKEIDYLLRSGWIACV
        ASSSIVSSAAVASVNRASPAQASMVAPFTGLKSAAAFPVTRKTNDITTLANNGGRVQCMKVWPPLGKKKFETLSYLPDMTE+QLLKEIDYL+RSGWI C+
Subjt:  ASSSIVSSAAVASVNRASPAQASMVAPFTGLKSAAAFPVTRKTNDITTLANNGGRVQCMKVWPPLGKKKFETLSYLPDMTESQLLKEIDYLLRSGWIACV

Query:  EFELEHGFVYREHHKSPGYYDGRYWTMWKLPMYGCTDASQVVKEIEEAKKEYPSAFIRVIGFDNKRQVQCISFIVYKPSSY
        EFELEHGFVYREHHKSPGYYDGRYWTMWKLPMYGCTDASQVVKEIEEAKKEYPSAFIRVIGFDNKRQVQCISFIVYKPSSY
Subjt:  EFELEHGFVYREHHKSPGYYDGRYWTMWKLPMYGCTDASQVVKEIEEAKKEYPSAFIRVIGFDNKRQVQCISFIVYKPSSY

A0A6J1GZ01 Ribulose bisphosphate carboxylase small subunit1.7e-8385.56Show/hide
Query:  SSSIVSSAAVASVNRASPAQASMVAPFTGLKSAAAFPVTRKTNDITTLANNGGRVQCMKVWPPLGKKKFETLSYLPDMTESQLLKEIDYLLRSGWIACVE
        +SSIVSSAAVASVNRASPAQASMVAPF GLKS AAFPVTRK NDITTLA+NG RV+CMKVWPPLG KKFETLSYLPD+T  QLLKEI YLLRSGW+ C+E
Subjt:  SSSIVSSAAVASVNRASPAQASMVAPFTGLKSAAAFPVTRKTNDITTLANNGGRVQCMKVWPPLGKKKFETLSYLPDMTESQLLKEIDYLLRSGWIACVE

Query:  FELEHGFVYREHHKSPGYYDGRYWTMWKLPMYGCTDASQVVKEIEEAKKEYPSAFIRVIGFDNKRQVQCISFIVYKPSSY
        FELE GFVYRE+H+SPGYYDGRYWTMWKLPM+GCTD +QV  EIEEAKKEYP+AFIRVIGFDN RQVQCISFIVYKP SY
Subjt:  FELEHGFVYREHHKSPGYYDGRYWTMWKLPMYGCTDASQVVKEIEEAKKEYPSAFIRVIGFDNKRQVQCISFIVYKPSSY

A0A6J1JHU0 Ribulose bisphosphate carboxylase small subunit2.3e-8384.44Show/hide
Query:  SSSIVSSAAVASVNRASPAQASMVAPFTGLKSAAAFPVTRKTNDITTLANNGGRVQCMKVWPPLGKKKFETLSYLPDMTESQLLKEIDYLLRSGWIACVE
        +SSIVSSAAVASVNRASPAQASMVAPF GLKS AAFPVTRK NDITTLA+NG RV+CMKVWPPLG KKFETLSYLPD++++QLLKEI YLLRSGW+ C+E
Subjt:  SSSIVSSAAVASVNRASPAQASMVAPFTGLKSAAAFPVTRKTNDITTLANNGGRVQCMKVWPPLGKKKFETLSYLPDMTESQLLKEIDYLLRSGWIACVE

Query:  FELEHGFVYREHHKSPGYYDGRYWTMWKLPMYGCTDASQVVKEIEEAKKEYPSAFIRVIGFDNKRQVQCISFIVYKPSSY
        FELE GFVYRE+H+SPGYYDGRYWTMWKLPM+GCTD +QV  EIEEAKKEYP+AFIRVIGFDN RQVQCISFIVYKP++Y
Subjt:  FELEHGFVYREHHKSPGYYDGRYWTMWKLPMYGCTDASQVVKEIEEAKKEYPSAFIRVIGFDNKRQVQCISFIVYKPSSY

SwissProt top hitse value%identityAlignment
P08474 Ribulose bisphosphate carboxylase small subunit, chloroplastic3.0e-8080.34Show/hide
Query:  SSSIVSSAAVASVNRASPAQASMVAPFTGLKSAAAFPVTRKTN-DITTLANNGGRVQCMKVWPPLGKKKFETLSYLPDMTESQLLKEIDYLLRSGWIACV
        +SSI+SSAAVASVN ASPAQASMVAPFTGLKS+A FP+TRK N DITTLA+N G+VQCMKVWPPLG +KFETLSYLPDM+  QL KE DYLLR+GW+ CV
Subjt:  SSSIVSSAAVASVNRASPAQASMVAPFTGLKSAAAFPVTRKTN-DITTLANNGGRVQCMKVWPPLGKKKFETLSYLPDMTESQLLKEIDYLLRSGWIACV

Query:  EFELEHGFVYREHHKSPGYYDGRYWTMWKLPMYGCTDASQVVKEIEEAKKEYPSAFIRVIGFDNKRQVQCISFIVYKP
        EF++  GFVYRE+H+SPG+YDGRYWTMWKLPM+GCTD+SQV++EIEEAKKEYP AFIRVIGFDN RQVQCISFI YKP
Subjt:  EFELEHGFVYREHHKSPGYYDGRYWTMWKLPMYGCTDASQVVKEIEEAKKEYPSAFIRVIGFDNKRQVQCISFIVYKP

P10796 Ribulose bisphosphate carboxylase small subunit 1B, chloroplastic2.4e-7775.14Show/hide
Query:  SSSIVSSAAVASVNRASPAQASMVAPFTGLKSAAAFPVTRK-TNDITTLANNGGRVQCMKVWPPLGKKKFETLSYLPDMTESQLLKEIDYLLRSGWIACV
        +SS++SSAAV +    SPAQA+MVAPFTGLKS+A+FPVTRK  NDIT++ +NGGRV CMKVWPP+GKKKFETLSYLPD+T+ +L KE+DYLLR+ WI CV
Subjt:  SSSIVSSAAVASVNRASPAQASMVAPFTGLKSAAAFPVTRK-TNDITTLANNGGRVQCMKVWPPLGKKKFETLSYLPDMTESQLLKEIDYLLRSGWIACV

Query:  EFELEHGFVYREHHKSPGYYDGRYWTMWKLPMYGCTDASQVVKEIEEAKKEYPSAFIRVIGFDNKRQVQCISFIVYKPSSY
        EFELEHGFVYREH  +PGYYDGRYWTMWKLP++GCTD++QV+KE+EE KKEYP AFIR+IGFDN RQVQCISFI YKP S+
Subjt:  EFELEHGFVYREHHKSPGYYDGRYWTMWKLPMYGCTDASQVVKEIEEAKKEYPSAFIRVIGFDNKRQVQCISFIVYKPSSY

P10798 Ribulose bisphosphate carboxylase small subunit 3B, chloroplastic2.8e-7876.24Show/hide
Query:  SSSIVSSAAVASVNRASPAQASMVAPFTGLKSAAAFPVTRKTN-DITTLANNGGRVQCMKVWPPLGKKKFETLSYLPDMTESQLLKEIDYLLRSGWIACV
        +SS++SSAAV +    SPAQA+MVAPFTGLKS+AAFPVTRKTN DIT++A+NGGRV CMKVWPP+GKKKFETLSYLPD+++ +L KE+DYLLR+ WI CV
Subjt:  SSSIVSSAAVASVNRASPAQASMVAPFTGLKSAAAFPVTRKTN-DITTLANNGGRVQCMKVWPPLGKKKFETLSYLPDMTESQLLKEIDYLLRSGWIACV

Query:  EFELEHGFVYREHHKSPGYYDGRYWTMWKLPMYGCTDASQVVKEIEEAKKEYPSAFIRVIGFDNKRQVQCISFIVYKPSSY
        EFELEHGFVYREH  +PGYYDGRYWTMWKLP++GCTD++QV+KE+EE KKEYP AFIR+IGFDN RQVQCISFI YKP S+
Subjt:  EFELEHGFVYREHHKSPGYYDGRYWTMWKLPMYGCTDASQVVKEIEEAKKEYPSAFIRVIGFDNKRQVQCISFIVYKPSSY

P16032 Ribulose bisphosphate carboxylase small subunit, chloroplastic 15.6e-7977.22Show/hide
Query:  SSSIVSSAAVASVNRASPAQASMVAPFTGLKSAAAFPVTRKTNDITTLANNGGRVQCMKVWPPLGKKKFETLSYLPDMTESQLLKEIDYLLRSGWIACVE
        +SS+VSSAAVA+VNR +PAQASMVAPF GLKS AAFPVT+K NDIT++A NGGRVQCM+VWPPLGKKKFETLSYLP ++E  L+KE+ YLL +GW+ C+E
Subjt:  SSSIVSSAAVASVNRASPAQASMVAPFTGLKSAAAFPVTRKTNDITTLANNGGRVQCMKVWPPLGKKKFETLSYLPDMTESQLLKEIDYLLRSGWIACVE

Query:  FELEHGFVYREHHKSPGYYDGRYWTMWKLPMYGCTDASQVVKEIEEAKKEYPSAFIRVIGFDNKRQVQCISFIVYKPSSY
        FE  HGFVYREH  +PGYYDGRYWTMWKLPM+GCTD SQVV E+EEAKK YP AFIR+IGFDN RQVQCISFI YKP+SY
Subjt:  FELEHGFVYREHHKSPGYYDGRYWTMWKLPMYGCTDASQVVKEIEEAKKEYPSAFIRVIGFDNKRQVQCISFIVYKPSSY

P27985 Ribulose bisphosphate carboxylase small subunit, chloroplastic 23.1e-7775.69Show/hide
Query:  SSSIVSSAAVASVNRASPAQASMVAPFTGLKSAAAFPVTRK-TNDITTLANNGGRVQCMKVWPPLGKKKFETLSYLPDMTESQLLKEIDYLLRSGWIACV
        +SS++SSAAV +    SPAQA+MVAPFTGLKS+AAFPVTRK  NDIT++A+NGGRV CMKVWPP+GKKKFETLSYLPD+TE +L KE+DYLLR+ WI CV
Subjt:  SSSIVSSAAVASVNRASPAQASMVAPFTGLKSAAAFPVTRK-TNDITTLANNGGRVQCMKVWPPLGKKKFETLSYLPDMTESQLLKEIDYLLRSGWIACV

Query:  EFELEHGFVYREHHKSPGYYDGRYWTMWKLPMYGCTDASQVVKEIEEAKKEYPSAFIRVIGFDNKRQVQCISFIVYKPSSY
        EFELEHGFVYREH  +PGYYDGRYWTMWKLP++GCTD++QV+KE++E K EYP+AFIR+IGFDN RQVQCISFI YKP S+
Subjt:  EFELEHGFVYREHHKSPGYYDGRYWTMWKLPMYGCTDASQVVKEIEEAKKEYPSAFIRVIGFDNKRQVQCISFIVYKPSSY

Arabidopsis top hitse value%identityAlignment
AT1G67090.1 ribulose bisphosphate carboxylase small chain 1A1.1e-7774.03Show/hide
Query:  SSSIVSSAAVASVNRASPAQASMVAPFTGLKSAAAFPVTRK-TNDITTLANNGGRVQCMKVWPPLGKKKFETLSYLPDMTESQLLKEIDYLLRSGWIACV
        +SS++SSA +     ASPAQA+MVAPF GLKS+AAFP TRK  NDIT++ +NGGRV CM+VWPP+GKKKFETLSYLPD+T+S+L KE+DYL+R+ WI CV
Subjt:  SSSIVSSAAVASVNRASPAQASMVAPFTGLKSAAAFPVTRK-TNDITTLANNGGRVQCMKVWPPLGKKKFETLSYLPDMTESQLLKEIDYLLRSGWIACV

Query:  EFELEHGFVYREHHKSPGYYDGRYWTMWKLPMYGCTDASQVVKEIEEAKKEYPSAFIRVIGFDNKRQVQCISFIVYKPSSY
        EFELEHGFVYREH  SPGYYDGRYWTMWKLP++GCTD++QV+KE+EE KKEYP+AFIR+IGFDN RQVQCISFI YKP S+
Subjt:  EFELEHGFVYREHHKSPGYYDGRYWTMWKLPMYGCTDASQVVKEIEEAKKEYPSAFIRVIGFDNKRQVQCISFIVYKPSSY

AT5G38410.1 Ribulose bisphosphate carboxylase (small chain) family protein2.0e-7976.24Show/hide
Query:  SSSIVSSAAVASVNRASPAQASMVAPFTGLKSAAAFPVTRKTN-DITTLANNGGRVQCMKVWPPLGKKKFETLSYLPDMTESQLLKEIDYLLRSGWIACV
        +SS++SSAAV +    SPAQA+MVAPFTGLKS+AAFPVTRKTN DIT++A+NGGRV CMKVWPP+GKKKFETLSYLPD+++ +L KE+DYLLR+ WI CV
Subjt:  SSSIVSSAAVASVNRASPAQASMVAPFTGLKSAAAFPVTRKTN-DITTLANNGGRVQCMKVWPPLGKKKFETLSYLPDMTESQLLKEIDYLLRSGWIACV

Query:  EFELEHGFVYREHHKSPGYYDGRYWTMWKLPMYGCTDASQVVKEIEEAKKEYPSAFIRVIGFDNKRQVQCISFIVYKPSSY
        EFELEHGFVYREH  +PGYYDGRYWTMWKLP++GCTD++QV+KE+EE KKEYP AFIR+IGFDN RQVQCISFI YKP S+
Subjt:  EFELEHGFVYREHHKSPGYYDGRYWTMWKLPMYGCTDASQVVKEIEEAKKEYPSAFIRVIGFDNKRQVQCISFIVYKPSSY

AT5G38410.3 Ribulose bisphosphate carboxylase (small chain) family protein1.4e-7774.19Show/hide
Query:  SSSIVSSAAVASVNRASPAQASMVAPFTGLKSAAAFPVTRKTN-DITTLANNGGRVQCMKVWPPLGKKKFETLSYLPDMTESQLLKEIDYLLRSGWIACV
        +SS++SSAAV +    SPAQA+MVAPFTGLKS+AAFPVTRKTN DIT++A+NGGRV CMKVWPP+GKKKFETLSYLPD+++ +L KE+DYLLR+ WI CV
Subjt:  SSSIVSSAAVASVNRASPAQASMVAPFTGLKSAAAFPVTRKTN-DITTLANNGGRVQCMKVWPPLGKKKFETLSYLPDMTESQLLKEIDYLLRSGWIACV

Query:  EFELE-----HGFVYREHHKSPGYYDGRYWTMWKLPMYGCTDASQVVKEIEEAKKEYPSAFIRVIGFDNKRQVQCISFIVYKPSSY
        EFELE     HGFVYREH  +PGYYDGRYWTMWKLP++GCTD++QV+KE+EE KKEYP AFIR+IGFDN RQVQCISFI YKP S+
Subjt:  EFELE-----HGFVYREHHKSPGYYDGRYWTMWKLPMYGCTDASQVVKEIEEAKKEYPSAFIRVIGFDNKRQVQCISFIVYKPSSY

AT5G38420.1 Ribulose bisphosphate carboxylase (small chain) family protein2.4e-7774.03Show/hide
Query:  SSSIVSSAAVASVNRASPAQASMVAPFTGLKSAAAFPVTRK-TNDITTLANNGGRVQCMKVWPPLGKKKFETLSYLPDMTESQLLKEIDYLLRSGWIACV
        +SS+ SS AV +    SPAQA+MVAPFTGLKS+A+FPVTRK  NDIT++ +NGGRV CMKVWPP+GKKKFETLSYLPD+++ +L KE+DYLLR+ WI CV
Subjt:  SSSIVSSAAVASVNRASPAQASMVAPFTGLKSAAAFPVTRK-TNDITTLANNGGRVQCMKVWPPLGKKKFETLSYLPDMTESQLLKEIDYLLRSGWIACV

Query:  EFELEHGFVYREHHKSPGYYDGRYWTMWKLPMYGCTDASQVVKEIEEAKKEYPSAFIRVIGFDNKRQVQCISFIVYKPSSY
        EFELEHGFVYREH  +PGYYDGRYWTMWKLP++GCTD++QV+KE+EE KKEYP AFIR+IGFDN RQVQCISFI YKP S+
Subjt:  EFELEHGFVYREHHKSPGYYDGRYWTMWKLPMYGCTDASQVVKEIEEAKKEYPSAFIRVIGFDNKRQVQCISFIVYKPSSY

AT5G38430.1 Ribulose bisphosphate carboxylase (small chain) family protein1.7e-7875.14Show/hide
Query:  SSSIVSSAAVASVNRASPAQASMVAPFTGLKSAAAFPVTRK-TNDITTLANNGGRVQCMKVWPPLGKKKFETLSYLPDMTESQLLKEIDYLLRSGWIACV
        +SS++SSAAV +    SPAQA+MVAPFTGLKS+A+FPVTRK  NDIT++ +NGGRV CMKVWPP+GKKKFETLSYLPD+T+ +L KE+DYLLR+ WI CV
Subjt:  SSSIVSSAAVASVNRASPAQASMVAPFTGLKSAAAFPVTRK-TNDITTLANNGGRVQCMKVWPPLGKKKFETLSYLPDMTESQLLKEIDYLLRSGWIACV

Query:  EFELEHGFVYREHHKSPGYYDGRYWTMWKLPMYGCTDASQVVKEIEEAKKEYPSAFIRVIGFDNKRQVQCISFIVYKPSSY
        EFELEHGFVYREH  +PGYYDGRYWTMWKLP++GCTD++QV+KE+EE KKEYP AFIR+IGFDN RQVQCISFI YKP S+
Subjt:  EFELEHGFVYREHHKSPGYYDGRYWTMWKLPMYGCTDASQVVKEIEEAKKEYPSAFIRVIGFDNKRQVQCISFIVYKPSSY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCTTCCTCCTCAATTGTCTCATCCGCGGCCGTTGCCTCCGTCAACCGCGCCTCCCCTGCTCAGGCTAGCATGGTGGCACCCTTCACTGGCCTCAAATCCGCCGCCGCCTT
CCCCGTCACCCGCAAGACCAACGACATCACCACCCTCGCCAACAACGGCGGGAGAGTTCAGTGCATGAAGGTGTGGCCTCCACTTGGAAAGAAGAAGTTCGAGACTCTGT
CGTACCTGCCTGATATGACCGAATCTCAGTTGTTGAAGGAAATTGACTACCTGCTCCGGTCTGGGTGGATCGCCTGCGTTGAGTTCGAGCTGGAGCATGGATTCGTGTAC
CGTGAGCACCACAAGTCACCAGGGTACTACGATGGGCGCTACTGGACCATGTGGAAGCTGCCCATGTACGGCTGCACAGACGCGTCTCAGGTGGTCAAGGAGATCGAGGA
GGCCAAGAAGGAATACCCCAGCGCATTCATCAGGGTCATTGGCTTCGACAACAAGCGCCAAGTGCAGTGCATCAGTTTCATTGTCTACAAGCCATCAAGCTAC
mRNA sequenceShow/hide mRNA sequence
GCTTCCTCCTCAATTGTCTCATCCGCGGCCGTTGCCTCCGTCAACCGCGCCTCCCCTGCTCAGGCTAGCATGGTGGCACCCTTCACTGGCCTCAAATCCGCCGCCGCCTT
CCCCGTCACCCGCAAGACCAACGACATCACCACCCTCGCCAACAACGGCGGGAGAGTTCAGTGCATGAAGGTGTGGCCTCCACTTGGAAAGAAGAAGTTCGAGACTCTGT
CGTACCTGCCTGATATGACCGAATCTCAGTTGTTGAAGGAAATTGACTACCTGCTCCGGTCTGGGTGGATCGCCTGCGTTGAGTTCGAGCTGGAGCATGGATTCGTGTAC
CGTGAGCACCACAAGTCACCAGGGTACTACGATGGGCGCTACTGGACCATGTGGAAGCTGCCCATGTACGGCTGCACAGACGCGTCTCAGGTGGTCAAGGAGATCGAGGA
GGCCAAGAAGGAATACCCCAGCGCATTCATCAGGGTCATTGGCTTCGACAACAAGCGCCAAGTGCAGTGCATCAGTTTCATTGTCTACAAGCCATCAAGCTAC
Protein sequenceShow/hide protein sequence
ASSSIVSSAAVASVNRASPAQASMVAPFTGLKSAAAFPVTRKTNDITTLANNGGRVQCMKVWPPLGKKKFETLSYLPDMTESQLLKEIDYLLRSGWIACVEFELEHGFVY
REHHKSPGYYDGRYWTMWKLPMYGCTDASQVVKEIEEAKKEYPSAFIRVIGFDNKRQVQCISFIVYKPSSY