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MS015357 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015357
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionAcyl-acyl carrier protein thioesterase ATL3
Genome locationscaffold2:2814055..2814168
RNA-Seq ExpressionMS015357
SyntenyMS015357
Gene Ontology termsGO:0006629 - lipid metabolic process (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0016295 - myristoyl-[acyl-carrier-protein] hydrolase activity (molecular function)
GO:0016296 - palmitoyl-[acyl-carrier-protein] hydrolase activity (molecular function)
GO:0047381 - dodecanoyl-[acyl-carrier-protein] hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013014.1 Acyl-acyl carrier protein thioesterase ATL3, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]1.8e-0571.05Show/hide
Query:  INFFSNEKSGDRFVVKVRISAMSAARIHMDHFIFKLPD
        + F +  KSGDRFVVKVRIS MSAAR ++DHFIFKLP+
Subjt:  INFFSNEKSGDRFVVKVRISAMSAARIHMDHFIFKLPD

XP_022150479.1 acyl-acyl carrier protein thioesterase ATL3, chloroplastic-like [Momordica charantia]8.3e-0671.05Show/hide
Query:  INFFSNEKSGDRFVVKVRISAMSAARIHMDHFIFKLPD
        + F +  +SGDRFVVKVRIS+MSAAR ++DHFIFKLPD
Subjt:  INFFSNEKSGDRFVVKVRISAMSAARIHMDHFIFKLPD

XP_022968132.1 acyl-acyl carrier protein thioesterase ATL3, chloroplastic-like [Cucurbita maxima]1.8e-0571.05Show/hide
Query:  INFFSNEKSGDRFVVKVRISAMSAARIHMDHFIFKLPD
        + F +  KSGDRFVVKVRIS MSAAR ++DHFIFKLP+
Subjt:  INFFSNEKSGDRFVVKVRISAMSAARIHMDHFIFKLPD

XP_023541635.1 acyl-acyl carrier protein thioesterase ATL3, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo]1.8e-0571.05Show/hide
Query:  INFFSNEKSGDRFVVKVRISAMSAARIHMDHFIFKLPD
        + F +  KSGDRFVVKVRIS MSAAR ++DHFIFKLP+
Subjt:  INFFSNEKSGDRFVVKVRISAMSAARIHMDHFIFKLPD

XP_023541637.1 acyl-acyl carrier protein thioesterase ATL3, chloroplastic-like isoform X2 [Cucurbita pepo subsp. pepo]1.8e-0571.05Show/hide
Query:  INFFSNEKSGDRFVVKVRISAMSAARIHMDHFIFKLPD
        + F +  KSGDRFVVKVRIS MSAAR ++DHFIFKLP+
Subjt:  INFFSNEKSGDRFVVKVRISAMSAARIHMDHFIFKLPD

TrEMBL top hitse value%identityAlignment
A0A6J0KWW0 acyl-acyl carrier protein thioesterase ATL3, chloroplastic-like4.4e-0565.79Show/hide
Query:  INFFSNEKSGDRFVVKVRISAMSAARIHMDHFIFKLPD
        I F +  +SGDRFVVK R+S +SAARI+ DHFIFKLP+
Subjt:  INFFSNEKSGDRFVVKVRISAMSAARIHMDHFIFKLPD

A0A6J1DA66 acyl-acyl carrier protein thioesterase ATL3, chloroplastic-like4.0e-0671.05Show/hide
Query:  INFFSNEKSGDRFVVKVRISAMSAARIHMDHFIFKLPD
        + F +  +SGDRFVVKVRIS+MSAAR ++DHFIFKLPD
Subjt:  INFFSNEKSGDRFVVKVRISAMSAARIHMDHFIFKLPD

A0A6J1G0B9 acyl-acyl carrier protein thioesterase ATL3, chloroplastic-like7.6e-0565.79Show/hide
Query:  INFFSNEKSGDRFVVKVRISAMSAARIHMDHFIFKLPD
        + F +  KSGDRFV+KVRIS MSAA  ++DHFIFKLP+
Subjt:  INFFSNEKSGDRFVVKVRISAMSAARIHMDHFIFKLPD

A0A6J1HST6 acyl-acyl carrier protein thioesterase ATL3, chloroplastic-like8.9e-0671.05Show/hide
Query:  INFFSNEKSGDRFVVKVRISAMSAARIHMDHFIFKLPD
        + F +  KSGDRFVVKVRIS MSAAR ++DHFIFKLP+
Subjt:  INFFSNEKSGDRFVVKVRISAMSAARIHMDHFIFKLPD

B9SLW9 Acyl-CoA thioesterase, putative7.6e-0565.79Show/hide
Query:  INFFSNEKSGDRFVVKVRISAMSAARIHMDHFIFKLPD
        + F +  +SGDRFVVKVRIS  SAAR++ DHFIFKLP+
Subjt:  INFFSNEKSGDRFVVKVRISAMSAARIHMDHFIFKLPD

SwissProt top hitse value%identityAlignment
F4HX80 Acyl-acyl carrier protein thioesterase ATL4, chloroplastic1.5e-0560.53Show/hide
Query:  INFFSNEKSGDRFVVKVRISAMSAARIHMDHFIFKLPD
        +NF +  +SGD+FVVKV IS  SAARI+ DH I KLP+
Subjt:  INFFSNEKSGDRFVVKVRISAMSAARIHMDHFIFKLPD

Q8W583 Acyl-acyl carrier protein thioesterase ATL3, chloroplastic4.6e-0765.79Show/hide
Query:  INFFSNEKSGDRFVVKVRISAMSAARIHMDHFIFKLPD
        + F S  +SGD+FVVK RIS  SAARI+ DHFIFKLP+
Subjt:  INFFSNEKSGDRFVVKVRISAMSAARIHMDHFIFKLPD

Q9C7I8 Acyl-acyl carrier protein thioesterase ATL2, chloroplastic3.6e-0455.26Show/hide
Query:  INFFSNEKSGDRFVVKVRISAMSAARIHMDHFIFKLPD
        I F +  +SG RFVVK RIS +S  RI+ + FIFKLP+
Subjt:  INFFSNEKSGDRFVVKVRISAMSAARIHMDHFIFKLPD

S4TE15 Acyl-acyl carrier protein thioesterase TE3, chloroplastic3.9e-0657.89Show/hide
Query:  INFFSNEKSGDRFVVKVRISAMSAARIHMDHFIFKLPD
        + F +  +SGD+FVVKVR+S  SAAR++ DH IFKLP+
Subjt:  INFFSNEKSGDRFVVKVRISAMSAARIHMDHFIFKLPD

Arabidopsis top hitse value%identityAlignment
AT1G35250.1 Thioesterase superfamily protein2.6e-0555.26Show/hide
Query:  INFFSNEKSGDRFVVKVRISAMSAARIHMDHFIFKLPD
        I F +  +SG RFVVK RIS +S  RI+ + FIFKLP+
Subjt:  INFFSNEKSGDRFVVKVRISAMSAARIHMDHFIFKLPD

AT1G35290.1 Thioesterase superfamily protein9.8e-0552.63Show/hide
Query:  INFFSNEKSGDRFVVKVRISAMSAARIHMDHFIFKLPD
        I F +  +SG +FVVK RIS  S  RI+ + FIFKLP+
Subjt:  INFFSNEKSGDRFVVKVRISAMSAARIHMDHFIFKLPD

AT1G68260.1 Thioesterase superfamily protein3.2e-0865.79Show/hide
Query:  INFFSNEKSGDRFVVKVRISAMSAARIHMDHFIFKLPD
        + F S  +SGD+FVVK RIS  SAARI+ DHFIFKLP+
Subjt:  INFFSNEKSGDRFVVKVRISAMSAARIHMDHFIFKLPD

AT1G68280.1 Thioesterase superfamily protein1.0e-0660.53Show/hide
Query:  INFFSNEKSGDRFVVKVRISAMSAARIHMDHFIFKLPD
        +NF +  +SGD+FVVKV IS  SAARI+ DH I KLP+
Subjt:  INFFSNEKSGDRFVVKVRISAMSAARIHMDHFIFKLPD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATTAATTTCTTCTCCAACGAGAAGAGTGGAGACAGATTTGTGGTTAAAGTCAGGATCTCGGCCATGTCAGCTGCTCGCATCCACATGGATCACTTCATTTTCAAGCTTCC
AGAT
mRNA sequenceShow/hide mRNA sequence
ATTAATTTCTTCTCCAACGAGAAGAGTGGAGACAGATTTGTGGTTAAAGTCAGGATCTCGGCCATGTCAGCTGCTCGCATCCACATGGATCACTTCATTTTCAAGCTTCC
AGAT
Protein sequenceShow/hide protein sequence
INFFSNEKSGDRFVVKVRISAMSAARIHMDHFIFKLPD