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MS015393 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015393
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein of unknown function (DUF 3339)
Genome locationscaffold586:4573..10920
RNA-Seq ExpressionMS015393
SyntenyMS015393
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR021775 - Protein of unknown function DUF3339


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA3459460.1 transmembrane protein [Gossypium australe]2.4e-3652.94Show/hide
Query:  MADWGPVVVAVVLFILLSPGLLFQVHGSDKFLEFGSFETSATSIFFHSIIFFALFCIFNL--------------------RKKKTMADWGPVFVAVVLFL
        M DWGPV V VVLF+LLSPGLLFQ+ G  +F+EF +F+TS  SI  HS+++FAL CIF L                     K + M+DWGPVFVAVVLF+
Subjt:  MADWGPVVVAVVLFILLSPGLLFQVHGSDKFLEFGSFETSATSIFFHSIIFFALFCIFNL--------------------RKKKTMADWGPVFVAVVLFL

Query:  LLSPGLLFQVPGHHQFVEFGNFHTSGASIFIHSLIFFALLCLFTFVVQLHIYI
        LL+PGLL QVPG  + +EFGNF TSG SI +HS+I+FAL+C+    + +H+Y+
Subjt:  LLSPGLLFQVPGHHQFVEFGNFHTSGASIFIHSLIFFALLCLFTFVVQLHIYI

PRQ39872.1 hypothetical protein RchiOBHm_Chr4g0429951 [Rosa chinensis]2.7e-3558.7Show/hide
Query:  MADWGPVVVAVVLFILLSPGLLFQVHGSDKFLEFGSFETSATSIFFHSIIFFALFCIFNLRKK------KTMADWGPVFVAVVLFLLLSPGLLFQVPGHH
        M+DWGPV +AVVLF+LLSPGLLFQV G    +EFGSF TS  +I  HS+++FAL C+F L  K        MADWGPV +AVVLF+LLSPGLLFQ+PG  
Subjt:  MADWGPVVVAVVLFILLSPGLLFQVHGSDKFLEFGSFETSATSIFFHSIIFFALFCIFNLRKK------KTMADWGPVFVAVVLFLLLSPGLLFQVPGHH

Query:  QFVEFGNFHTSGASIFIHSLIFFALLCLFTFVVQLHIY
        + VEFGN  TSG SI +H++IFF L+ +F   + +HIY
Subjt:  QFVEFGNFHTSGASIFIHSLIFFALLCLFTFVVQLHIY

XP_015893840.1 uncharacterized protein LOC107427943 [Ziziphus jujuba]2.1e-3556.43Show/hide
Query:  MADWGPVVVAVVLFILLSPGLLFQVHGSDKFLEFGSFETSATSIFFHSIIFFALFCIFNLR--------KKKTMADWGPVFVAVVLFLLLSPGLLFQVPG
        M+DWGPV VAVVLFILL+PGLL Q+ G  +F+EFG+F+TS  SI  HS+++FAL CIF L             MADW PV + VVLF+LL PGLLFQ PG
Subjt:  MADWGPVVVAVVLFILLSPGLLFQVHGSDKFLEFGSFETSATSIFFHSIIFFALFCIFNLR--------KKKTMADWGPVFVAVVLFLLLSPGLLFQVPG

Query:  HHQFVEFGNFHTSGASIFIHSLIFFALLCLFTFVVQLHIY
        HH+ +EFG+  T+G +I +H+LIFFAL C+F   + +HIY
Subjt:  HHQFVEFGNFHTSGASIFIHSLIFFALLCLFTFVVQLHIY

XP_021644306.1 uncharacterized protein LOC110638161 [Hevea brasiliensis]4.1e-3657.75Show/hide
Query:  MADWGPVVVAVVLFILLSPGLLFQVHGSDKFLEFGSFETSATSIFFHSIIFFALFCIFNLRKK----------KTMADWGPVFVAVVLFLLLSPGLLFQV
        M+DWGPV VAVVLF+LL+PGLLFQV G  + +EFG+F+TS  SI  HS+++FAL C+F L  K          + MADWGPV +AVVLF+LLSPGLLFQ+
Subjt:  MADWGPVVVAVVLFILLSPGLLFQVHGSDKFLEFGSFETSATSIFFHSIIFFALFCIFNLRKK----------KTMADWGPVFVAVVLFLLLSPGLLFQV

Query:  PGHHQFVEFGNFHTSGASIFIHSLIFFALLCLFTFVVQLHIY
        PG  + VEFGN  TSG SI +H++IFFAL+ +F   + +HIY
Subjt:  PGHHQFVEFGNFHTSGASIFIHSLIFFALLCLFTFVVQLHIY

XP_039156196.1 uncharacterized protein LOC104417744 [Eucalyptus grandis]2.7e-3555.1Show/hide
Query:  MADWGPVVVAVVLFILLSPGLLFQVHGSDKFLEFGSFETSATSIFFHSIIFFALFCIFNLRKK---------------KTMADWGPVFVAVVLFLLLSPG
        M+DWGPV VAVVLF+LL+PGLLFQ+ G  +F+EFG+F+TS  SI  HS+++F L C+F L  K               + MADWGPV +AVVLF+LLSPG
Subjt:  MADWGPVVVAVVLFILLSPGLLFQVHGSDKFLEFGSFETSATSIFFHSIIFFALFCIFNLRKK---------------KTMADWGPVFVAVVLFLLLSPG

Query:  LLFQVPGHHQFVEFGNFHTSGASIFIHSLIFFALLCLFTFVVQLHIY
        LLFQ+PG  + VEFGN  T+GASI +H++IFF L+ +F   V +HIY
Subjt:  LLFQVPGHHQFVEFGNFHTSGASIFIHSLIFFALLCLFTFVVQLHIY

TrEMBL top hitse value%identityAlignment
A0A022S0H1 Uncharacterized protein2.2e-3558.39Show/hide
Query:  MADWGPVVVAVVLFILLSPGLLFQVHGSDKFLEFGSFETSATSIFFHSIIFFALFCIFNLR-----KKKTMADWGPVFVAVVLFLLLSPGLLFQVPGHHQ
        M+DWGPV VAVVLF+LL+PGLL QV G  +F+EFG+F+TS  SI  H+II+F L CI  L      KK  MADWGPV + VVLF+LL PGLLFQ+PG ++
Subjt:  MADWGPVVVAVVLFILLSPGLLFQVHGSDKFLEFGSFETSATSIFFHSIIFFALFCIFNLR-----KKKTMADWGPVFVAVVLFLLLSPGLLFQVPGHHQ

Query:  FVEFGNFHTSGASIFIHSLIFFALLCLFTFVVQLHIY
         VEFG   T+G +I +H+LIFFA   + TF V +HIY
Subjt:  FVEFGNFHTSGASIFIHSLIFFALLCLFTFVVQLHIY

A0A2I0IER0 Uncharacterized protein2.5e-3455.22Show/hide
Query:  MADWGPVVVAVVLFILLSPGLLFQVHGSDKFLEFGSFETSATSIFFHSIIFFALFCIFNLRKKK--TMADWGPVFVAVVLFLLLSPGLLFQVPGHHQFVE
        M +WGPV V+V+L++LL+PGLLFQV G  + +EFG+F TS  SI  HS+++F L C+F L  K    MADWGPV +AVVLF+LLSPGLLFQ+PG H+ ++
Subjt:  MADWGPVVVAVVLFILLSPGLLFQVHGSDKFLEFGSFETSATSIFFHSIIFFALFCIFNLRKKK--TMADWGPVFVAVVLFLLLSPGLLFQVPGHHQFVE

Query:  FGNFHTSGASIFIHSLIFFALLCLFTFVVQLHIY
        FG+  TSG SI +H++IFF L+ +F   + +HIY
Subjt:  FGNFHTSGASIFIHSLIFFALLCLFTFVVQLHIY

A0A2P6R0B8 Uncharacterized protein1.3e-3558.7Show/hide
Query:  MADWGPVVVAVVLFILLSPGLLFQVHGSDKFLEFGSFETSATSIFFHSIIFFALFCIFNLRKK------KTMADWGPVFVAVVLFLLLSPGLLFQVPGHH
        M+DWGPV +AVVLF+LLSPGLLFQV G    +EFGSF TS  +I  HS+++FAL C+F L  K        MADWGPV +AVVLF+LLSPGLLFQ+PG  
Subjt:  MADWGPVVVAVVLFILLSPGLLFQVHGSDKFLEFGSFETSATSIFFHSIIFFALFCIFNLRKK------KTMADWGPVFVAVVLFLLLSPGLLFQVPGHH

Query:  QFVEFGNFHTSGASIFIHSLIFFALLCLFTFVVQLHIY
        + VEFGN  TSG SI +H++IFF L+ +F   + +HIY
Subjt:  QFVEFGNFHTSGASIFIHSLIFFALLCLFTFVVQLHIY

A0A5B6UN67 Transmembrane protein1.2e-3652.94Show/hide
Query:  MADWGPVVVAVVLFILLSPGLLFQVHGSDKFLEFGSFETSATSIFFHSIIFFALFCIFNL--------------------RKKKTMADWGPVFVAVVLFL
        M DWGPV V VVLF+LLSPGLLFQ+ G  +F+EF +F+TS  SI  HS+++FAL CIF L                     K + M+DWGPVFVAVVLF+
Subjt:  MADWGPVVVAVVLFILLSPGLLFQVHGSDKFLEFGSFETSATSIFFHSIIFFALFCIFNL--------------------RKKKTMADWGPVFVAVVLFL

Query:  LLSPGLLFQVPGHHQFVEFGNFHTSGASIFIHSLIFFALLCLFTFVVQLHIYI
        LL+PGLL QVPG  + +EFGNF TSG SI +HS+I+FAL+C+    + +H+Y+
Subjt:  LLSPGLLFQVPGHHQFVEFGNFHTSGASIFIHSLIFFALLCLFTFVVQLHIYI

A0A6P4B5Q9 uncharacterized protein LOC1074279431.0e-3556.43Show/hide
Query:  MADWGPVVVAVVLFILLSPGLLFQVHGSDKFLEFGSFETSATSIFFHSIIFFALFCIFNLR--------KKKTMADWGPVFVAVVLFLLLSPGLLFQVPG
        M+DWGPV VAVVLFILL+PGLL Q+ G  +F+EFG+F+TS  SI  HS+++FAL CIF L             MADW PV + VVLF+LL PGLLFQ PG
Subjt:  MADWGPVVVAVVLFILLSPGLLFQVHGSDKFLEFGSFETSATSIFFHSIIFFALFCIFNLR--------KKKTMADWGPVFVAVVLFLLLSPGLLFQVPG

Query:  HHQFVEFGNFHTSGASIFIHSLIFFALLCLFTFVVQLHIY
        HH+ +EFG+  T+G +I +H+LIFFAL C+F   + +HIY
Subjt:  HHQFVEFGNFHTSGASIFIHSLIFFALLCLFTFVVQLHIY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G27030.1 unknown protein6.0e-3350Show/hide
Query:  MADWGPVVVAVVLFILLSPGLLFQVHGSDKFLEFGSFETSATSIFFHSIIFFALFCIFNLRKK--------KTMADWGPVFVAVVLFLLLSPGLLFQVPG
        M DWGPV VAV LF+LL+PGLL QV G  + +EFG+F+TS  S+  H++I+F L CI  L  +         +MADW PV V VVLF++LSPGLLF +PG
Subjt:  MADWGPVVVAVVLFILLSPGLLFQVHGSDKFLEFGSFETSATSIFFHSIIFFALFCIFNLRKK--------KTMADWGPVFVAVVLFLLLSPGLLFQVPG

Query:  HHQFVEFGNFHTSGASIFIHSLIFFALLCLFTFVVQLHIY
        +++ V+FG   T+G +I +H+LIFFA+  +    + LHIY
Subjt:  HHQFVEFGNFHTSGASIFIHSLIFFALLCLFTFVVQLHIY

AT3G48660.1 Protein of unknown function (DUF 3339)1.7e-1964.18Show/hide
Query:  MADWGPVFVAVVLFLLLSPGLLFQVPGHHQFVEFGNFHTSGASIFIHSLIFFALLCLFTFVVQLHIY
        MADWGPV VAV+LF+LL+PGLLFQ+P   + VEFGN  TSGASI +H++IFF L+ +FT  ++LHIY
Subjt:  MADWGPVFVAVVLFLLLSPGLLFQVPGHHQFVEFGNFHTSGASIFIHSLIFFALLCLFTFVVQLHIY

AT5G08391.1 Protein of unknown function (DUF 3339)2.9e-1957.35Show/hide
Query:  MADWGPVFVAVVLFLLLSPGLLFQVPGHHQFVEFGNFHTSGASIFIHSLIFFALLCLFTFVVQLHIYI
        M+DWGPV V V+LF++L+PGLLFQ+PG  ++VEFGNF TS  S+ +HSL++F+L+C+F   +++HIYI
Subjt:  MADWGPVFVAVVLFLLLSPGLLFQVPGHHQFVEFGNFHTSGASIFIHSLIFFALLCLFTFVVQLHIYI

AT5G40980.1 Protein of unknown function (DUF 3339)8.7e-1656.06Show/hide
Query:  ADWGPVFVAVVLFLLLSPGLLFQVPGHHQFVEFGNFHTSGASIFIHSLIFFALLCLFTFVVQLHIY
        ADWGPV VAV LF+LLSPGLLFQ+P   + +EFGN  TSG SI +H++I+F +L +    +Q+HI+
Subjt:  ADWGPVFVAVVLFLLLSPGLLFQVPGHHQFVEFGNFHTSGASIFIHSLIFFALLCLFTFVVQLHIY

AT5G63500.1 Protein of unknown function (DUF 3339)8.4e-1961.19Show/hide
Query:  MADWGPVFVAVVLFLLLSPGLLFQVPGHHQFVEFGNFHTSGASIFIHSLIFFALLCLFTFVVQLHIY
        MADWGPV +AV+LF++LSPGLLFQ+P   + VEFGN  TSGASI +H++IFF L+ +FT  + +HIY
Subjt:  MADWGPVFVAVVLFLLLSPGLLFQVPGHHQFVEFGNFHTSGASIFIHSLIFFALLCLFTFVVQLHIY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGATTGGGGCCCAGTTGTGGTGGCTGTGGTTCTCTTCATTCTGCTCTCCCCAGGGCTTCTGTTTCAGGTCCATGGCAGCGACAAATTCCTGGAGTTCGGAAGCTT
CGAGACCAGCGCCACCTCCATTTTCTTCCATTCCATCATCTTCTTCGCCCTATTCTGCATCTTCAACCTCAGAAAAAAAAAAACGATGGCGGATTGGGGCCCAGTTTTTG
TGGCTGTGGTTCTCTTTCTTCTTCTATCTCCCGGCCTTCTCTTCCAGGTCCCCGGCCACCATCAATTCGTCGAGTTCGGCAACTTCCATACCAGCGGTGCCTCCATTTTC
ATCCATTCTCTCATCTTCTTCGCCCTCCTCTGCCTCTTCACCTTCGTCGTTCAGCTTCACATCTACATC
mRNA sequenceShow/hide mRNA sequence
ATGGCGGATTGGGGCCCAGTTGTGGTGGCTGTGGTTCTCTTCATTCTGCTCTCCCCAGGGCTTCTGTTTCAGGTCCATGGCAGCGACAAATTCCTGGAGTTCGGAAGCTT
CGAGACCAGCGCCACCTCCATTTTCTTCCATTCCATCATCTTCTTCGCCCTATTCTGCATCTTCAACCTCAGAAAAAAAAAAACGATGGCGGATTGGGGCCCAGTTTTTG
TGGCTGTGGTTCTCTTTCTTCTTCTATCTCCCGGCCTTCTCTTCCAGGTCCCCGGCCACCATCAATTCGTCGAGTTCGGCAACTTCCATACCAGCGGTGCCTCCATTTTC
ATCCATTCTCTCATCTTCTTCGCCCTCCTCTGCCTCTTCACCTTCGTCGTTCAGCTTCACATCTACATC
Protein sequenceShow/hide protein sequence
MADWGPVVVAVVLFILLSPGLLFQVHGSDKFLEFGSFETSATSIFFHSIIFFALFCIFNLRKKKTMADWGPVFVAVVLFLLLSPGLLFQVPGHHQFVEFGNFHTSGASIF
IHSLIFFALLCLFTFVVQLHIYI