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MS015394 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015394
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold586:21322..21708
RNA-Seq ExpressionMS015394
SyntenyMS015394
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8649098.1 hypothetical protein Csa_015237 [Cucumis sativus]4.8e-3773.72Show/hide
Query:  QVESTREEQRLKHSQ----------LSAQQE-DVERSETKVEREEEAVVKELKEVKRQNFITHCLVSAMIILTVAWQISEVSFILKLRGG-LSNPFKSLA
        +VESTR EQRL HS+          L A++E +VERSE K++ EE  +VKELKEVK+QNFITHCLVSAMIILTVAWQISEVSFILKLR G LSNPFKSLA
Subjt:  QVESTREEQRLKHSQ----------LSAQQE-DVERSETKVEREEEAVVKELKEVKRQNFITHCLVSAMIILTVAWQISEVSFILKLRGG-LSNPFKSLA

Query:  KILKKKTTSAIHNQIEATELPHLNMPALPLVSLPDFD
         ILK+KTTSAI +QIEATELPHLN+PALP V+LPDFD
Subjt:  KILKKKTTSAIHNQIEATELPHLNMPALPLVSLPDFD

XP_004152113.1 uncharacterized protein LOC101214522 [Cucumis sativus]4.8e-3773.72Show/hide
Query:  QVESTREEQRLKHSQ----------LSAQQE-DVERSETKVEREEEAVVKELKEVKRQNFITHCLVSAMIILTVAWQISEVSFILKLRGG-LSNPFKSLA
        +VESTR EQRL HS+          L A++E +VERSE K++ EE  +VKELKEVK+QNFITHCLVSAMIILTVAWQISEVSFILKLR G LSNPFKSLA
Subjt:  QVESTREEQRLKHSQ----------LSAQQE-DVERSETKVEREEEAVVKELKEVKRQNFITHCLVSAMIILTVAWQISEVSFILKLRGG-LSNPFKSLA

Query:  KILKKKTTSAIHNQIEATELPHLNMPALPLVSLPDFD
         ILK+KTTSAI +QIEATELPHLN+PALP V+LPDFD
Subjt:  KILKKKTTSAIHNQIEATELPHLNMPALPLVSLPDFD

XP_008454012.1 PREDICTED: uncharacterized protein LOC103494562 [Cucumis melo]5.3e-3671.43Show/hide
Query:  QVESTREEQRLKH-----------SQLSAQQE-DVERSETKVEREEEAVVKELKEVKRQNFITHCLVSAMIILTVAWQISEVSFILKLRGG-LSNPFKSL
        +VESTREEQRL H           + L A+ E +VERSE KV+ EE  +VKELKEVK+QNF+THCLVSAMIILTVAWQISEVSFILKLR G LSNPFKSL
Subjt:  QVESTREEQRLKH-----------SQLSAQQE-DVERSETKVEREEEAVVKELKEVKRQNFITHCLVSAMIILTVAWQISEVSFILKLRGG-LSNPFKSL

Query:  AKILKKKTTSAIHNQIEATELPHLNMPALPLVSLPDFDLD
          ILK+KTTSAI +QIEATELP LN+PA+P VSLPDFD D
Subjt:  AKILKKKTTSAIHNQIEATELPHLNMPALPLVSLPDFDLD

XP_022145221.1 uncharacterized protein LOC111014725 [Momordica charantia]7.1e-5796.9Show/hide
Query:  QVESTREEQRLKHSQLSAQQEDVERSETKVEREEEAVVKELKEVKRQNFITHCLVSAMIILTVAWQISEVSFILKLRGGLSNPFKSLAKILKKKTTSAIH
        QVESTREEQR KHSQLSAQQEDVERSETKVEREEEAVVKEL+EVKRQNFITHCLVSAMIILTVAWQ+SEVSFILKLRGGLSNPFKSLAKILKKKTTSAIH
Subjt:  QVESTREEQRLKHSQLSAQQEDVERSETKVEREEEAVVKELKEVKRQNFITHCLVSAMIILTVAWQISEVSFILKLRGGLSNPFKSLAKILKKKTTSAIH

Query:  NQIEATELPHLNMPALPLVSLPDFDLDGE
        NQIEATELPHLNMPALP VSLPDFDLDGE
Subjt:  NQIEATELPHLNMPALPLVSLPDFDLDGE

XP_038895500.1 uncharacterized protein LOC120083719 [Benincasa hispida]7.6e-4373.24Show/hide
Query:  QVESTREEQRLKHSQLSAQQEDVERSETKVERE--------------EEAVVKELKEVKRQNFITHCLVSAMIILTVAWQISEVSFILKLRGGLSNPFKS
        QVESTREEQRL HSQ+SAQQ+D +  ET++E +              E+ +VKELKEVKRQNFITHCLVSAMIILTVAWQ+SEVSFILKLR GLSNPFKS
Subjt:  QVESTREEQRLKHSQLSAQQEDVERSETKVERE--------------EEAVVKELKEVKRQNFITHCLVSAMIILTVAWQISEVSFILKLRGGLSNPFKS

Query:  LAKILKKKTTSAIHNQIEATELPHLNMPALPLVSLPDFDLDG
        L  ILK+KTTSAI +QIEATELPHLNMPALP V+LP+FDLDG
Subjt:  LAKILKKKTTSAIHNQIEATELPHLNMPALPLVSLPDFDLDG

TrEMBL top hitse value%identityAlignment
A0A0A0KTW6 Uncharacterized protein2.3e-3773.72Show/hide
Query:  QVESTREEQRLKHSQ----------LSAQQE-DVERSETKVEREEEAVVKELKEVKRQNFITHCLVSAMIILTVAWQISEVSFILKLRGG-LSNPFKSLA
        +VESTR EQRL HS+          L A++E +VERSE K++ EE  +VKELKEVK+QNFITHCLVSAMIILTVAWQISEVSFILKLR G LSNPFKSLA
Subjt:  QVESTREEQRLKHSQ----------LSAQQE-DVERSETKVEREEEAVVKELKEVKRQNFITHCLVSAMIILTVAWQISEVSFILKLRGG-LSNPFKSLA

Query:  KILKKKTTSAIHNQIEATELPHLNMPALPLVSLPDFD
         ILK+KTTSAI +QIEATELPHLN+PALP V+LPDFD
Subjt:  KILKKKTTSAIHNQIEATELPHLNMPALPLVSLPDFD

A0A1S3BXR6 uncharacterized protein LOC1034945622.5e-3671.43Show/hide
Query:  QVESTREEQRLKH-----------SQLSAQQE-DVERSETKVEREEEAVVKELKEVKRQNFITHCLVSAMIILTVAWQISEVSFILKLRGG-LSNPFKSL
        +VESTREEQRL H           + L A+ E +VERSE KV+ EE  +VKELKEVK+QNF+THCLVSAMIILTVAWQISEVSFILKLR G LSNPFKSL
Subjt:  QVESTREEQRLKH-----------SQLSAQQE-DVERSETKVEREEEAVVKELKEVKRQNFITHCLVSAMIILTVAWQISEVSFILKLRGG-LSNPFKSL

Query:  AKILKKKTTSAIHNQIEATELPHLNMPALPLVSLPDFDLD
          ILK+KTTSAI +QIEATELP LN+PA+P VSLPDFD D
Subjt:  AKILKKKTTSAIHNQIEATELPHLNMPALPLVSLPDFDLD

A0A5A7TSP6 Uncharacterized protein2.5e-3671.43Show/hide
Query:  QVESTREEQRLKH-----------SQLSAQQE-DVERSETKVEREEEAVVKELKEVKRQNFITHCLVSAMIILTVAWQISEVSFILKLRGG-LSNPFKSL
        +VESTREEQRL H           + L A+ E +VERSE KV+ EE  +VKELKEVK+QNF+THCLVSAMIILTVAWQISEVSFILKLR G LSNPFKSL
Subjt:  QVESTREEQRLKH-----------SQLSAQQE-DVERSETKVEREEEAVVKELKEVKRQNFITHCLVSAMIILTVAWQISEVSFILKLRGG-LSNPFKSL

Query:  AKILKKKTTSAIHNQIEATELPHLNMPALPLVSLPDFDLD
          ILK+KTTSAI +QIEATELP LN+PA+P VSLPDFD D
Subjt:  AKILKKKTTSAIHNQIEATELPHLNMPALPLVSLPDFDLD

A0A5D3CZN3 Uncharacterized protein2.5e-3671.43Show/hide
Query:  QVESTREEQRLKH-----------SQLSAQQE-DVERSETKVEREEEAVVKELKEVKRQNFITHCLVSAMIILTVAWQISEVSFILKLRGG-LSNPFKSL
        +VESTREEQRL H           + L A+ E +VERSE KV+ EE  +VKELKEVK+QNF+THCLVSAMIILTVAWQISEVSFILKLR G LSNPFKSL
Subjt:  QVESTREEQRLKH-----------SQLSAQQE-DVERSETKVEREEEAVVKELKEVKRQNFITHCLVSAMIILTVAWQISEVSFILKLRGG-LSNPFKSL

Query:  AKILKKKTTSAIHNQIEATELPHLNMPALPLVSLPDFDLD
          ILK+KTTSAI +QIEATELP LN+PA+P VSLPDFD D
Subjt:  AKILKKKTTSAIHNQIEATELPHLNMPALPLVSLPDFDLD

A0A6J1CVQ0 uncharacterized protein LOC1110147253.4e-5796.9Show/hide
Query:  QVESTREEQRLKHSQLSAQQEDVERSETKVEREEEAVVKELKEVKRQNFITHCLVSAMIILTVAWQISEVSFILKLRGGLSNPFKSLAKILKKKTTSAIH
        QVESTREEQR KHSQLSAQQEDVERSETKVEREEEAVVKEL+EVKRQNFITHCLVSAMIILTVAWQ+SEVSFILKLRGGLSNPFKSLAKILKKKTTSAIH
Subjt:  QVESTREEQRLKHSQLSAQQEDVERSETKVEREEEAVVKELKEVKRQNFITHCLVSAMIILTVAWQISEVSFILKLRGGLSNPFKSLAKILKKKTTSAIH

Query:  NQIEATELPHLNMPALPLVSLPDFDLDGE
        NQIEATELPHLNMPALP VSLPDFDLDGE
Subjt:  NQIEATELPHLNMPALPLVSLPDFDLDGE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G27300.1 unknown protein7.6e-0936.89Show/hide
Query:  EEQRLKHSQLSAQQEDVERSETKVEREEEAVVKELKEVKRQNFITHCLVSAMIILTVAWQISEVSFILKLRGGLSNPFKSLAKILK---KKTTSAIHNQI
        EE++ + S  S+  +     + ++E   E + K++K+VK+QN ITH L+SA IILT+ WQ+SE S I  L+  +S+P +S+  +L    K     I NQ+
Subjt:  EEQRLKHSQLSAQQEDVERSETKVEREEEAVVKELKEVKRQNFITHCLVSAMIILTVAWQISEVSFILKLRGGLSNPFKSLAKILK---KKTTSAIHNQI

Query:  EAT
          T
Subjt:  EAT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CAGGTGGAATCAACAAGAGAAGAACAGAGGCTCAAGCACTCCCAACTTTCAGCTCAACAAGAGGATGTGGAAAGAAGTGAAACCAAAGTGGAAAGAGAAGAAGAGGCAGT
AGTGAAAGAACTAAAAGAAGTGAAGAGGCAGAATTTCATAACTCACTGCTTAGTTTCAGCAATGATAATCCTCACAGTTGCTTGGCAAATCTCTGAGGTGTCTTTCATTT
TGAAACTCAGAGGTGGGTTGAGCAACCCATTCAAATCCCTAGCCAAAATTCTCAAAAAGAAGACAACTTCAGCAATACATAATCAGATTGAAGCTACTGAATTGCCTCAT
CTTAATATGCCTGCCCTACCTCTTGTGAGCCTACCAGATTTTGACTTGGATGGAGAA
mRNA sequenceShow/hide mRNA sequence
CAGGTGGAATCAACAAGAGAAGAACAGAGGCTCAAGCACTCCCAACTTTCAGCTCAACAAGAGGATGTGGAAAGAAGTGAAACCAAAGTGGAAAGAGAAGAAGAGGCAGT
AGTGAAAGAACTAAAAGAAGTGAAGAGGCAGAATTTCATAACTCACTGCTTAGTTTCAGCAATGATAATCCTCACAGTTGCTTGGCAAATCTCTGAGGTGTCTTTCATTT
TGAAACTCAGAGGTGGGTTGAGCAACCCATTCAAATCCCTAGCCAAAATTCTCAAAAAGAAGACAACTTCAGCAATACATAATCAGATTGAAGCTACTGAATTGCCTCAT
CTTAATATGCCTGCCCTACCTCTTGTGAGCCTACCAGATTTTGACTTGGATGGAGAA
Protein sequenceShow/hide protein sequence
QVESTREEQRLKHSQLSAQQEDVERSETKVEREEEAVVKELKEVKRQNFITHCLVSAMIILTVAWQISEVSFILKLRGGLSNPFKSLAKILKKKTTSAIHNQIEATELPH
LNMPALPLVSLPDFDLDGE