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MS015400 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015400
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold586:85565..85741
RNA-Seq ExpressionMS015400
SyntenyMS015400
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF1879364.1 hypothetical protein Lal_00005830 [Lupinus albus]7.1e-0443.86Show/hide
Query:  ICDDENRVQAAMISTQGLGSPLMVEILAIREGIRLAIRMGFSKVVVESDSLEAVKLI
        I D E R  ++  +  G+GSP++VE+LA+  G+ LA  +GF ++++ESD LEAV++I
Subjt:  ICDDENRVQAAMISTQGLGSPLMVEILAIREGIRLAIRMGFSKVVVESDSLEAVKLI
XP_022155289.1 uncharacterized protein LOC111022426 [Momordica charantia]1.3e-0556.36Show/hide
Query:  DDENRVQAAMISTQGLGSPLMVEILAIREGIRLAIRMGFSKVVVESDSLEAVKLI
        D    + AAMI    + +PL+ EILAIREG+RLA R+G  +V+VESDSLEA+ LI
Subjt:  DDENRVQAAMISTQGLGSPLMVEILAIREGIRLAIRMGFSKVVVESDSLEAVKLI
TrEMBL top hitse value%identityAlignment
A0A6A5MX02 Uncharacterized protein3.4e-0443.86Show/hide
Query:  ICDDENRVQAAMISTQGLGSPLMVEILAIREGIRLAIRMGFSKVVVESDSLEAVKLI
        I D E R  ++  +  G+GSP++VE+LA+  G+ LA  +GF ++++ESD LEAV++I
Subjt:  ICDDENRVQAAMISTQGLGSPLMVEILAIREGIRLAIRMGFSKVVVESDSLEAVKLI
A0A6J1DPU1 uncharacterized protein LOC1110224266.2e-0656.36Show/hide
Query:  DDENRVQAAMISTQGLGSPLMVEILAIREGIRLAIRMGFSKVVVESDSLEAVKLI
        D    + AAMI    + +PL+ EILAIREG+RLA R+G  +V+VESDSLEA+ LI
Subjt:  DDENRVQAAMISTQGLGSPLMVEILAIREGIRLAIRMGFSKVVVESDSLEAVKLI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATCTGTGATGATGAAAATCGGGTACAAGCAGCGATGATTTCTACCCAGGGTTTGGGAAGCCCCCTAATGGTAGAAATCCTTGCTATCAGAGAAGGAATTCGTTTGGCGAT
CCGGATGGGTTTCAGTAAGGTGGTGGTCGAATCTGACTCCCTCGAAGCGGTTAAACTAATAGAGAAG
mRNA sequenceShow/hide mRNA sequence
ATCTGTGATGATGAAAATCGGGTACAAGCAGCGATGATTTCTACCCAGGGTTTGGGAAGCCCCCTAATGGTAGAAATCCTTGCTATCAGAGAAGGAATTCGTTTGGCGAT
CCGGATGGGTTTCAGTAAGGTGGTGGTCGAATCTGACTCCCTCGAAGCGGTTAAACTAATAGAGAAG
Protein sequenceShow/hide protein sequence
ICDDENRVQAAMISTQGLGSPLMVEILAIREGIRLAIRMGFSKVVVESDSLEAVKLIEK