CuGenDBv2

Gene ID	MS015408
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	GRIP and coiled-coil domain-containing protein
Genome location	scaffold586:152349..155598
RNA-Seq Expression	MS015408
Synteny	MS015408
Gene Ontology terms	GO:0006979 - response to oxidative stress (biological process) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6579058.1 hypothetical protein SDJN03_23506, partial [Cucurbita argyrosperma subsp. sororia]

1.4e-22

79.45

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Query:  MARTGGRIRGGNDSALGGFLKAVVRFLSMAEFEILFVLLSIVAFILFKDLTSRPEYNEILVKKPEGFDQWPFQ
        MAR GGR R GN+ + GGFLKAV R L MAEFEILFVL  IVAFI+FKDLTSRPEYN+ILVKKPEGFD WPFQ
Subjt:  MARTGGRIRGGNDSALGGFLKAVVRFLSMAEFEILFVLLSIVAFILFKDLTSRPEYNEILVKKPEGFDQWPFQ

XP_008463128.1 PREDICTED: uncharacterized protein LOC103501353 [Cucumis melo]

1.4e-22

79.45

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Query:  MARTGGRIRGGNDSALGGFLKAVVRFLSMAEFEILFVLLSIVAFILFKDLTSRPEYNEILVKKPEGFDQWPFQ
        MAR  GR R G+DS+ GGFLKA  RFL MAEFEILFVL  IVAFI+FKDLTSRPEYN+ILVKKPEGFD WPFQ
Subjt:  MARTGGRIRGGNDSALGGFLKAVVRFLSMAEFEILFVLLSIVAFILFKDLTSRPEYNEILVKKPEGFDQWPFQ

XP_011655131.2 uncharacterized protein LOC101207856 [Cucumis sativus]

6.4e-23

80.82

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Query:  MARTGGRIRGGNDSALGGFLKAVVRFLSMAEFEILFVLLSIVAFILFKDLTSRPEYNEILVKKPEGFDQWPFQ
        MAR  GRIR G DS+ GGFLKA  RFL MAEFEILFVL  IVAFI+FKDLTSRPEYN+ILVKKPEGFD WPFQ
Subjt:  MARTGGRIRGGNDSALGGFLKAVVRFLSMAEFEILFVLLSIVAFILFKDLTSRPEYNEILVKKPEGFDQWPFQ

XP_022141376.1 uncharacterized protein LOC111011789 [Momordica charantia]

4.0e-25

83.56

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Query:  MARTGGRIRGGNDSALGGFLKAVVRFLSMAEFEILFVLLSIVAFILFKDLTSRPEYNEILVKKPEGFDQWPFQ
        MARTGGR R GNDSA+ GFLKAV+RFL MAEFEILF+L  +VAFILFKDLTSRPEYN+ILVKKPEGFD WPFQ
Subjt:  MARTGGRIRGGNDSALGGFLKAVVRFLSMAEFEILFVLLSIVAFILFKDLTSRPEYNEILVKKPEGFDQWPFQ

XP_022938472.1 uncharacterized protein LOC111444698 [Cucurbita moschata]

4.2e-22

78.08

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Query:  MARTGGRIRGGNDSALGGFLKAVVRFLSMAEFEILFVLLSIVAFILFKDLTSRPEYNEILVKKPEGFDQWPFQ
        MAR GGR R GN+ + GGFLKAV R L M EFEILFVL  IVAFI+FKDLTSRPEYN+ILVKKPEGFD WPFQ
Subjt:  MARTGGRIRGGNDSALGGFLKAVVRFLSMAEFEILFVLLSIVAFILFKDLTSRPEYNEILVKKPEGFDQWPFQ

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KPT8 Uncharacterized protein

3.1e-23

80.82

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Query:  MARTGGRIRGGNDSALGGFLKAVVRFLSMAEFEILFVLLSIVAFILFKDLTSRPEYNEILVKKPEGFDQWPFQ
        MAR  GRIR G DS+ GGFLKA  RFL MAEFEILFVL  IVAFI+FKDLTSRPEYN+ILVKKPEGFD WPFQ
Subjt:  MARTGGRIRGGNDSALGGFLKAVVRFLSMAEFEILFVLLSIVAFILFKDLTSRPEYNEILVKKPEGFDQWPFQ

A0A1S3CK24 uncharacterized protein LOC103501353

6.9e-23

79.45

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Query:  MARTGGRIRGGNDSALGGFLKAVVRFLSMAEFEILFVLLSIVAFILFKDLTSRPEYNEILVKKPEGFDQWPFQ
        MAR  GR R G+DS+ GGFLKA  RFL MAEFEILFVL  IVAFI+FKDLTSRPEYN+ILVKKPEGFD WPFQ
Subjt:  MARTGGRIRGGNDSALGGFLKAVVRFLSMAEFEILFVLLSIVAFILFKDLTSRPEYNEILVKKPEGFDQWPFQ

A0A6J1CIZ9 uncharacterized protein LOC111011789

2.0e-25

83.56

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Query:  MARTGGRIRGGNDSALGGFLKAVVRFLSMAEFEILFVLLSIVAFILFKDLTSRPEYNEILVKKPEGFDQWPFQ
        MARTGGR R GNDSA+ GFLKAV+RFL MAEFEILF+L  +VAFILFKDLTSRPEYN+ILVKKPEGFD WPFQ
Subjt:  MARTGGRIRGGNDSALGGFLKAVVRFLSMAEFEILFVLLSIVAFILFKDLTSRPEYNEILVKKPEGFDQWPFQ

A0A6J1FE48 uncharacterized protein LOC111444698

2.0e-22

78.08

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Query:  MARTGGRIRGGNDSALGGFLKAVVRFLSMAEFEILFVLLSIVAFILFKDLTSRPEYNEILVKKPEGFDQWPFQ
        MAR GGR R GN+ + GGFLKAV R L M EFEILFVL  IVAFI+FKDLTSRPEYN+ILVKKPEGFD WPFQ
Subjt:  MARTGGRIRGGNDSALGGFLKAVVRFLSMAEFEILFVLLSIVAFILFKDLTSRPEYNEILVKKPEGFDQWPFQ

A0A6J1K0Z3 uncharacterized protein LOC111489659

2.6e-22

78.08

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Query:  MARTGGRIRGGNDSALGGFLKAVVRFLSMAEFEILFVLLSIVAFILFKDLTSRPEYNEILVKKPEGFDQWPFQ
        MA  GGR R GN+ + GGFLK V RFL MAEFEILFVL  IVAFI+FKDLTSRPEYN+ILVKKPEGFD WPFQ
Subjt:  MARTGGRIRGGNDSALGGFLKAVVRFLSMAEFEILFVLLSIVAFILFKDLTSRPEYNEILVKKPEGFDQWPFQ

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G14430.1 unknown protein

1.5e-14

53.33

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Query:  MARTGGRIRGG---NDSALGGFLKAVVRFLSMAEFEILFVLLSIVAFILFKDLTSRPEYNEILVKKPEGFDQWPF
        + R  G  R G   +DS L  F+ +V  F  +AEFEILFVL  ++ +++FKDLTSRPEYN ILV+KP G D WPF
Subjt:  MARTGGRIRGG---NDSALGGFLKAVVRFLSMAEFEILFVLLSIVAFILFKDLTSRPEYNEILVKKPEGFDQWPF

Sequences

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CDS sequence

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ATGGCTCGGACAGGCGGCCGGATCAGGGGTGGAAATGATTCGGCGTTGGGAGGGTTTCTAAAAGCGGTGGTGAGATTCTTGAGTATGGCGGAGTTTGAGATCCTTTTTGT
TCTCCTCTCTATCGTAGCTTTTATTCTCTTCAAAGATCTCACATCAAGACCAGAGTACAATGAGATCCTTGTAAAGAAGCCTGAGGGGTTTGATCAGTGGCCATTCCAG

mRNA sequence

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Protein sequence

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MARTGGRIRGGNDSALGGFLKAVVRFLSMAEFEILFVLLSIVAFILFKDLTSRPEYNEILVKKPEGFDQWPFQ

MS015408 (gene) of Bitter gourd (TR) v1 genome