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MS015455 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015455
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description50S ribosomal protein L14, chloroplastic
Genome locationscaffold424:194201..194332
RNA-Seq ExpressionMS015455
SyntenyMS015455
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0015934 - large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
InterPro domainsIPR000218 - Ribosomal protein L14P
IPR036853 - Ribosomal protein L14 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB2096568.1 hypothetical protein ES319_A01G116700v1 [Gossypium barbadense]1.2e-0894.44Show/hide
Query:  NVAGNSRARELMCIRIIGASNRRYAHIGDVIVAVIK
        NVA NSRARELMCIR+IGASNRRYAHIGDVIVAVIK
Subjt:  NVAGNSRARELMCIRIIGASNRRYAHIGDVIVAVIK

QWY90249.1 ribosomal protein L14 [Rhododendron molle]3.5e-0894.44Show/hide
Query:  NVAGNSRARELMCIRIIGASNRRYAHIGDVIVAVIK
        NVA NS ARELMCIRIIGASNRRYAHIGDVIVAVIK
Subjt:  NVAGNSRARELMCIRIIGASNRRYAHIGDVIVAVIK

XP_023747775.1 50S ribosomal protein L14, chloroplastic [Lactuca sativa]2.7e-0894.44Show/hide
Query:  NVAGNSRARELMCIRIIGASNRRYAHIGDVIVAVIK
        NVAGNS ARELMCI+IIGASNRRYAHIGDVIVAVIK
Subjt:  NVAGNSRARELMCIRIIGASNRRYAHIGDVIVAVIK

YP_009338789.1 ribosomal protein L14 [Carissa macrocarpa]3.5e-0879.07Show/hide
Query:  LMEEIKKNVAGNSRARELMCIRIIGASNRRYAHIGDVIVAVIK
        +  + + NVA NS ARELMCIRIIGASNRRYAHIGDVIVAVIK
Subjt:  LMEEIKKNVAGNSRARELMCIRIIGASNRRYAHIGDVIVAVIK

YP_009924580.1 50S ribosomal protein L14 [Styrax dasyanthus]7.1e-0976.92Show/hide
Query:  ALMEEIKK--------NVAGNSRARELMCIRIIGASNRRYAHIGDVIVAVIK
        AL E+IKK        NVA NS ARELMCIRIIGASNRRYAHIGDVIVAVIK
Subjt:  ALMEEIKK--------NVAGNSRARELMCIRIIGASNRRYAHIGDVIVAVIK

TrEMBL top hitse value%identityAlignment
A0A2J6JK59 Ribosomal_L16 domain-containing protein1.3e-0894.44Show/hide
Query:  NVAGNSRARELMCIRIIGASNRRYAHIGDVIVAVIK
        NVAGNS ARELMCI+IIGASNRRYAHIGDVIVAVIK
Subjt:  NVAGNSRARELMCIRIIGASNRRYAHIGDVIVAVIK

A0A2S1H7L8 50S ribosomal protein L14, chloroplastic1.7e-0879.07Show/hide
Query:  LMEEIKKNVAGNSRARELMCIRIIGASNRRYAHIGDVIVAVIK
        +  + + NVA NS ARELMCIRIIGASNRRYAHIGDVIVAVIK
Subjt:  LMEEIKKNVAGNSRARELMCIRIIGASNRRYAHIGDVIVAVIK

A0A385H4M2 50S ribosomal protein L14, chloroplastic1.7e-0879.07Show/hide
Query:  LMEEIKKNVAGNSRARELMCIRIIGASNRRYAHIGDVIVAVIK
        +  + + NVA NS ARELMCIRIIGASNRRYAHIGDVIVAVIK
Subjt:  LMEEIKKNVAGNSRARELMCIRIIGASNRRYAHIGDVIVAVIK

A0A5J5WVL6 Uncharacterized protein5.9e-0994.44Show/hide
Query:  NVAGNSRARELMCIRIIGASNRRYAHIGDVIVAVIK
        NVA NSRARELMCIR+IGASNRRYAHIGDVIVAVIK
Subjt:  NVAGNSRARELMCIRIIGASNRRYAHIGDVIVAVIK

A0A7G7WP72 50S ribosomal protein L14, chloroplastic3.4e-0976.92Show/hide
Query:  ALMEEIKK--------NVAGNSRARELMCIRIIGASNRRYAHIGDVIVAVIK
        AL E+IKK        NVA NS ARELMCIRIIGASNRRYAHIGDVIVAVIK
Subjt:  ALMEEIKK--------NVAGNSRARELMCIRIIGASNRRYAHIGDVIVAVIK

SwissProt top hitse value%identityAlignment
B0Z4R2 50S ribosomal protein L14, chloroplastic6.0e-1176.74Show/hide
Query:  LMEEIKKNVAGNSRARELMCIRIIGASNRRYAHIGDVIVAVIK
        +  + + NVA NS ARELMCIRIIGASNRRYAHIGD+IVAVIK
Subjt:  LMEEIKKNVAGNSRARELMCIRIIGASNRRYAHIGDVIVAVIK

B0Z4Z6 50S ribosomal protein L14, chloroplastic6.0e-1176.74Show/hide
Query:  LMEEIKKNVAGNSRARELMCIRIIGASNRRYAHIGDVIVAVIK
        +  + + NVA NS ARELMCIRIIGASNRRYAHIGD+IVAVIK
Subjt:  LMEEIKKNVAGNSRARELMCIRIIGASNRRYAHIGDVIVAVIK

B0Z580 50S ribosomal protein L14, chloroplastic6.0e-1176.74Show/hide
Query:  LMEEIKKNVAGNSRARELMCIRIIGASNRRYAHIGDVIVAVIK
        +  + + NVA NS ARELMCIRIIGASNRRYAHIGD+IVAVIK
Subjt:  LMEEIKKNVAGNSRARELMCIRIIGASNRRYAHIGDVIVAVIK

B0Z5G4 50S ribosomal protein L14, chloroplastic6.0e-1176.74Show/hide
Query:  LMEEIKKNVAGNSRARELMCIRIIGASNRRYAHIGDVIVAVIK
        +  + + NVA NS ARELMCIRIIGASNRRYAHIGD+IVAVIK
Subjt:  LMEEIKKNVAGNSRARELMCIRIIGASNRRYAHIGDVIVAVIK

Q9MTI9 50S ribosomal protein L14, chloroplastic6.0e-1176.74Show/hide
Query:  LMEEIKKNVAGNSRARELMCIRIIGASNRRYAHIGDVIVAVIK
        +  + + NVA NS ARELMCIRIIGASNRRYAHIGD+IVAVIK
Subjt:  LMEEIKKNVAGNSRARELMCIRIIGASNRRYAHIGDVIVAVIK

Arabidopsis top hitse value%identityAlignment
ATCG00780.1 ribosomal protein L145.6e-1294.44Show/hide
Query:  NVAGNSRARELMCIRIIGASNRRYAHIGDVIVAVIK
        NVA NS ARELMCIRIIGASNRRYAHIGDVIVAVIK
Subjt:  NVAGNSRARELMCIRIIGASNRRYAHIGDVIVAVIK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCATTGATGGAAGAGATTAAAAAAAATGTAGCAGGTAATAGTAGAGCCCGAGAATTGATGTGTATTCGAATCATAGGGGCTAGTAATCGACGATATGCTCATATTGGTGA
TGTTATTGTTGCTGTAATTAAA
mRNA sequenceShow/hide mRNA sequence
GCATTGATGGAAGAGATTAAAAAAAATGTAGCAGGTAATAGTAGAGCCCGAGAATTGATGTGTATTCGAATCATAGGGGCTAGTAATCGACGATATGCTCATATTGGTGA
TGTTATTGTTGCTGTAATTAAA
Protein sequenceShow/hide protein sequence
ALMEEIKKNVAGNSRARELMCIRIIGASNRRYAHIGDVIVAVIK