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MS015486 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015486
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCyclin-dependent kinase inhibitor
Genome locationscaffold468:112849..113028
RNA-Seq ExpressionMS015486
SyntenyMS015486
Gene Ontology termsGO:0032875 - regulation of DNA endoreduplication (biological process)
GO:0045839 - negative regulation of mitotic nuclear division (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR040389 - Cyclin-dependent protein kinase inhibitor SMR


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF8022732.1 hypothetical protein BT93_F0293 [Corymbia citriodora subsp. variegata]8.8e-1062.96Show/hide
Query:  RDGCRTPERPEFRIASATAPPPPPKKKPVSATKKREAPEGGYFEPPDDLERFFS
        RDGC TP R EFRI +A+APPPPP+KKP+   KKR  P+ GYF+ PDDLE  F+
Subjt:  RDGCRTPERPEFRIASATAPPPPPKKKPVSATKKREAPEGGYFEPPDDLERFFS
KAG6607256.1 Cyclin-dependent protein kinase inhibitor SMR4, partial [Cucurbita argyrosperma subsp. sororia]3.9e-1066.07Show/hide
Query:  DGCRTPERPEFRIASATAPPPPPKKKPVSATKKREAPEGGYFEPPDDLERFFSPVP
        +G RTPER EFRI  A  PPPPP+KK V+A KKREAP  GYF+ PDDLE +F  VP
Subjt:  DGCRTPERPEFRIASATAPPPPPKKKPVSATKKREAPEGGYFEPPDDLERFFSPVP
KAG7036940.1 Cyclin-dependent protein kinase inhibitor SMR4, partial [Cucurbita argyrosperma subsp. argyrosperma]7.9e-1164.41Show/hide
Query:  DGCRTPERPEFRIASATAPPPPPKKKPVSATKKREAPEGGYFEPPDDLERFFSPVPSLA
        +G RTPER EFRI  A  PPPPP+KK V+A KKREAP  GYF+ PDDLE +F  VP +A
Subjt:  DGCRTPERPEFRIASATAPPPPPKKKPVSATKKREAPEGGYFEPPDDLERFFSPVPSLA
XP_010106519.1 cyclin-dependent protein kinase inhibitor SMR4 [Morus notabilis]2.2e-0860.71Show/hide
Query:  DGCRTPERPEFRIASATAPPPPPKKKPVSATKKREAPEGGYFEPPDDLERFFSPVP
        DGC TP+R E RI   +APPPPP+KKP  A KKR+ P+ GYF PP DLE FF+  P
Subjt:  DGCRTPERPEFRIASATAPPPPPKKKPVSATKKREAPEGGYFEPPDDLERFFSPVP
XP_018720939.1 cyclin-dependent protein kinase inhibitor SMR4 [Eucalyptus grandis]1.7e-0861.11Show/hide
Query:  RDGCRTPERPEFRIASATAPPPPPKKKPVSATKKREAPEGGYFEPPDDLERFFS
        RDGC TP R EFRI +A+APPPPP+KK   + KKR  P+ GYF+ PDDLE  F+
Subjt:  RDGCRTPERPEFRIASATAPPPPPKKKPVSATKKREAPEGGYFEPPDDLERFFS
TrEMBL top hitse value%identityAlignment
A0A059D4M4 Uncharacterized protein8.0e-0961.11Show/hide
Query:  RDGCRTPERPEFRIASATAPPPPPKKKPVSATKKREAPEGGYFEPPDDLERFFS
        RDGC TP R EFRI +A+APPPPP+KK   + KKR  P+ GYF+ PDDLE  F+
Subjt:  RDGCRTPERPEFRIASATAPPPPPKKKPVSATKKREAPEGGYFEPPDDLERFFS
A0A4D6N9P1 Uncharacterized protein4.4e-0760.38Show/hide
Query:  CRTPERPEFRIASATAPPPPPKKKPVSATKKREAPEGGYFEPPDDLERFFSPV
        C TP R + RI +A+APPPPPKKKP+S  +KRE P+ GYF PP DL++ FS V
Subjt:  CRTPERPEFRIASATAPPPPPKKKPVSATKKREAPEGGYFEPPDDLERFFSPV
A0A6A4PGK5 Uncharacterized protein4.4e-0757.14Show/hide
Query:  GCRTPERPEFRIASATAPPPPPKKKPVSATKKREAPEGGYFEPPDDLERFFSPVPS
        GC TP+R E RI +A  PPPPPKKKP S  KKR  P+ GYF+PPD  + FF   P+
Subjt:  GCRTPERPEFRIASATAPPPPPKKKPVSATKKREAPEGGYFEPPDDLERFFSPVPS
A0A6A5NMJ2 Uncharacterized protein4.4e-0757.14Show/hide
Query:  GCRTPERPEFRIASATAPPPPPKKKPVSATKKREAPEGGYFEPPDDLERFFSPVPS
        GC TP+R E RI +A  PPPPPKKKP S  KKR  P+ GYF+PPD  + FF   P+
Subjt:  GCRTPERPEFRIASATAPPPPPKKKPVSATKKREAPEGGYFEPPDDLERFFSPVPS
W9RUH3 Uncharacterized protein1.0e-0860.71Show/hide
Query:  DGCRTPERPEFRIASATAPPPPPKKKPVSATKKREAPEGGYFEPPDDLERFFSPVP
        DGC TP+R E RI   +APPPPP+KKP  A KKR+ P+ GYF PP DLE FF+  P
Subjt:  DGCRTPERPEFRIASATAPPPPPKKKPVSATKKREAPEGGYFEPPDDLERFFSPVP
SwissProt top hitse value%identityAlignment
Q1JPP8 Cyclin-dependent protein kinase inhibitor SMR43.0e-0546.43Show/hide
Query:  DGCRTPERPEFRIASATAPPPPPKKKPVSATKKREAPEGGYFEPPDDLERFFSPVP
        +GC TP    +RI  A+  PPPP+KK +   +KR+ P  GYF+PP DLE  F   P
Subjt:  DGCRTPERPEFRIASATAPPPPPKKKPVSATKKREAPEGGYFEPPDDLERFFSPVP
Q9LNX4 Cyclin-dependent protein kinase inhibitor SMR57.5e-0448.21Show/hide
Query:  GCRTPERPEFRIASATAPPPPPKKKP--VSATKKREAPEGGYFEPPDDLERFFSPV
        GC TP R + RI +    PPP ++K   +   KKRE P+ GYF+PP DL+ FFS V
Subjt:  GCRTPERPEFRIASATAPPPPPKKKP--VSATKKREAPEGGYFEPPDDLERFFSPV
Arabidopsis top hitse value%identityAlignment
AT5G02220.1 unknown protein2.2e-0646.43Show/hide
Query:  DGCRTPERPEFRIASATAPPPPPKKKPVSATKKREAPEGGYFEPPDDLERFFSPVP
        +GC TP    +RI  A+  PPPP+KK +   +KR+ P  GYF+PP DLE  F   P
Subjt:  DGCRTPERPEFRIASATAPPPPPKKKPVSATKKREAPEGGYFEPPDDLERFFSPVP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CGGGACGGCTGCCGTACGCCGGAGCGGCCGGAATTTCGGATTGCATCGGCGACGGCGCCGCCGCCACCGCCGAAGAAGAAGCCGGTTTCAGCGACGAAGAAGCGCGAGGC
TCCGGAGGGGGGATATTTCGAACCGCCTGACGATTTGGAGCGATTCTTCTCTCCGGTTCCGAGCTTGGCG
mRNA sequenceShow/hide mRNA sequence
CGGGACGGCTGCCGTACGCCGGAGCGGCCGGAATTTCGGATTGCATCGGCGACGGCGCCGCCGCCACCGCCGAAGAAGAAGCCGGTTTCAGCGACGAAGAAGCGCGAGGC
TCCGGAGGGGGGATATTTCGAACCGCCTGACGATTTGGAGCGATTCTTCTCTCCGGTTCCGAGCTTGGCG
Protein sequenceShow/hide protein sequence
RDGCRTPERPEFRIASATAPPPPPKKKPVSATKKREAPEGGYFEPPDDLERFFSPVPSLA