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MS015494 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015494
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold468:196464..196706
RNA-Seq ExpressionMS015494
SyntenyMS015494
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8687139.1 hypothetical protein F3Y22_tig00111022pilonHSYRG00109 [Hibiscus syriacus]3.4e-0943.21Show/hide
Query:  KASIKELFTIKRLLCDYEKASGQKVNFDKSVLWFSPNVHSDFRSYLQTVIGMCLVPSLGDYLGLPLVLTHNRSRDFKAINE
        K S+ E+  +K +L  YEKASGQKVN++KS ++FSPN  S  R    + +G+   P  G+YLGLPLV+   +   F  I +
Subjt:  KASIKELFTIKRLLCDYEKASGQKVNFDKSVLWFSPNVHSDFRSYLQTVIGMCLVPSLGDYLGLPLVLTHNRSRDFKAINE

XP_019191707.1 PREDICTED: uncharacterized protein LOC109186235 [Ipomoea nil]4.5e-0944.44Show/hide
Query:  KASIKELFTIKRLLCDYEKASGQKVNFDKSVLWFSPNVHSDFRSYLQTVIGMCLVPSLGDYLGLPLVLTHNRSRDFKAINE
        +A+ +E+  IK  L  Y +ASGQ+VNFDKS+  FS N     RS + + +G+ +   LG YLGLP VL  N+S  F+ I E
Subjt:  KASIKELFTIKRLLCDYEKASGQKVNFDKSVLWFSPNVHSDFRSYLQTVIGMCLVPSLGDYLGLPLVLTHNRSRDFKAINE

XP_022150019.1 uncharacterized protein LOC111018297 [Momordica charantia]5.3e-1858.02Show/hide
Query:  KASIKELFTIKRLLCDYEKASGQKVNFDKSVLWFSPNVHSDFRSYLQTVIGMCLVPSLGDYLGLPLVLTHNRSRDFKAINE
        +A+I EL+ +K +L DYEKASGQKVNFDKS LWFS NV   F++Y+ ++ GM LVP L DYLGLP  L+H+ S DF  I +
Subjt:  KASIKELFTIKRLLCDYEKASGQKVNFDKSVLWFSPNVHSDFRSYLQTVIGMCLVPSLGDYLGLPLVLTHNRSRDFKAINE

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]4.5e-0947.22Show/hide
Query:  ELFTIKRLLCDYEKASGQKVNFDKSVLWFSPNVHSDFRSYLQTVIGMCLVPSLGDYLGLPLVLTHNRSRDFK
        E   ++RLL  Y +ASGQ +NF KS L FSPNVH + + YLQ ++ + LV   G+YLGLP   T  R    K
Subjt:  ELFTIKRLLCDYEKASGQKVNFDKSVLWFSPNVHSDFRSYLQTVIGMCLVPSLGDYLGLPLVLTHNRSRDFK

XP_039066899.1 uncharacterized protein LOC120212775 [Hibiscus syriacus]5.9e-0941.98Show/hide
Query:  KASIKELFTIKRLLCDYEKASGQKVNFDKSVLWFSPNVHSDFRSYLQTVIGMCLVPSLGDYLGLPLVLTHNRSRDFKAINE
        K S+ E   I+  L  YE ASGQKVN +KS L+FSP+   + R  + +++G+  VP LG YLG+PL +  N+   F  + E
Subjt:  KASIKELFTIKRLLCDYEKASGQKVNFDKSVLWFSPNVHSDFRSYLQTVIGMCLVPSLGDYLGLPLVLTHNRSRDFKAINE

TrEMBL top hitse value%identityAlignment
A0A2N9EXN4 Uncharacterized protein2.0e-1046.91Show/hide
Query:  KASIKELFTIKRLLCDYEKASGQKVNFDKSVLWFSPNVHSDFRSYLQTVIGMCLVPSLGDYLGLPLVLTHNRSRDFKAINE
        +ASI    TI R+L D+   SGQKVN  KS ++FS NV+ +FR +L  ++G+   P++G YLG PL L    SRDF  I E
Subjt:  KASIKELFTIKRLLCDYEKASGQKVNFDKSVLWFSPNVHSDFRSYLQTVIGMCLVPSLGDYLGLPLVLTHNRSRDFKAINE

A0A2N9EY89 Uncharacterized protein2.0e-1046.91Show/hide
Query:  KASIKELFTIKRLLCDYEKASGQKVNFDKSVLWFSPNVHSDFRSYLQTVIGMCLVPSLGDYLGLPLVLTHNRSRDFKAINE
        +ASI    TI R+L D+   SGQKVN  KS ++FS NV+ +FR +L  ++G+   P++G YLG PL L    SRDF  I E
Subjt:  KASIKELFTIKRLLCDYEKASGQKVNFDKSVLWFSPNVHSDFRSYLQTVIGMCLVPSLGDYLGLPLVLTHNRSRDFKAINE

A0A2N9IEG3 Uncharacterized protein6.8e-1148.15Show/hide
Query:  KASIKELFTIKRLLCDYEKASGQKVNFDKSVLWFSPNVHSDFRSYLQTVIGMCLVPSLGDYLGLPLVLTHNRSRDFKAINE
        KASI    TI R+L D+   SGQKVN  KS ++FSPNV+ D R +L  ++G+   P++G YLG PL      SRDF  I E
Subjt:  KASIKELFTIKRLLCDYEKASGQKVNFDKSVLWFSPNVHSDFRSYLQTVIGMCLVPSLGDYLGLPLVLTHNRSRDFKAINE

A0A6A2Z6T8 Uncharacterized protein1.7e-0943.21Show/hide
Query:  KASIKELFTIKRLLCDYEKASGQKVNFDKSVLWFSPNVHSDFRSYLQTVIGMCLVPSLGDYLGLPLVLTHNRSRDFKAINE
        K S+ E+  +K +L  YEKASGQKVN++KS ++FSPN  S  R    + +G+   P  G+YLGLPLV+   +   F  I +
Subjt:  KASIKELFTIKRLLCDYEKASGQKVNFDKSVLWFSPNVHSDFRSYLQTVIGMCLVPSLGDYLGLPLVLTHNRSRDFKAINE

A0A6J1D8T0 uncharacterized protein LOC1110182972.6e-1858.02Show/hide
Query:  KASIKELFTIKRLLCDYEKASGQKVNFDKSVLWFSPNVHSDFRSYLQTVIGMCLVPSLGDYLGLPLVLTHNRSRDFKAINE
        +A+I EL+ +K +L DYEKASGQKVNFDKS LWFS NV   F++Y+ ++ GM LVP L DYLGLP  L+H+ S DF  I +
Subjt:  KASIKELFTIKRLLCDYEKASGQKVNFDKSVLWFSPNVHSDFRSYLQTVIGMCLVPSLGDYLGLPLVLTHNRSRDFKAINE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAGGCTTCTATTAAGGAGTTGTTTACTATTAAGAGGCTTTTGTGTGACTATGAGAAGGCCTCGGGTCAAAAGGTGAATTTCGACAAATCAGTGTTATGGTTCTCCCCCAA
TGTTCATTCTGATTTTCGGTCTTATTTGCAAACGGTGATTGGCATGTGCTTGGTTCCATCCTTGGGGGACTATTTGGGCCTCCCTTTAGTTCTAACTCACAATAGGAGTC
GTGATTTCAAAGCAATCAATGAG
mRNA sequenceShow/hide mRNA sequence
AAGGCTTCTATTAAGGAGTTGTTTACTATTAAGAGGCTTTTGTGTGACTATGAGAAGGCCTCGGGTCAAAAGGTGAATTTCGACAAATCAGTGTTATGGTTCTCCCCCAA
TGTTCATTCTGATTTTCGGTCTTATTTGCAAACGGTGATTGGCATGTGCTTGGTTCCATCCTTGGGGGACTATTTGGGCCTCCCTTTAGTTCTAACTCACAATAGGAGTC
GTGATTTCAAAGCAATCAATGAG
Protein sequenceShow/hide protein sequence
KASIKELFTIKRLLCDYEKASGQKVNFDKSVLWFSPNVHSDFRSYLQTVIGMCLVPSLGDYLGLPLVLTHNRSRDFKAINE