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MS015498 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015498
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionMuDRA-like transposase
Genome locationscaffold468:292284..293087
RNA-Seq ExpressionMS015498
SyntenyMS015498
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062637.1 uncharacterized protein E6C27_scaffold79G001490 [Cucumis melo var. makuwa]3.8e-3337.33Show/hide
Query:  YISNVGFEKWARAHTKERRYQILTTNISKSLNATLKESKDLPVVSLFDSVRQLLQR------------------------------------NPL-----
        Y+  VGFE+W+ A++++RRYQI+TTNI +SLN+ LK  +DLPV SL +++R+ LQR                                    NP+     
Subjt:  YISNVGFEKWARAHTKERRYQILTTNISKSLNATLKESKDLPVVSLFDSVRQLLQR------------------------------------NPL-----

Query:  -----------------CPC-------------FTVICRLDLNPYSYVSEYYLYSKLLSTYNGSIRHVGNHSDWGFVMIDVIVLPPIIKCPVGRPRKQRI
                         C C               VI  L+LNPY++VS+YY  + L +TY G +R +GNH+DW  V ++  +LPPI + P GRPRK+RI
Subjt:  -----------------CPC-------------FTVICRLDLNPYSYVSEYYLYSKLLSTYNGSIRHVGNHSDWGFVMIDVIVLPPIIKCPVGRPRKQRI

Query:  PSIGELRKHTRCGHCQRIGHNRRTC
        PSIGE+ K ++C  C+R GHN RTC
Subjt:  PSIGELRKHTRCGHCQRIGHNRRTC

XP_016900337.1 PREDICTED: uncharacterized protein LOC107990862 [Cucumis melo]4.5e-3437.33Show/hide
Query:  YISNVGFEKWARAHTKERRYQILTTNISKSLNATLKESKDLPVVSLFDSVRQLLQR------------------------------------NPL-----
        Y+  VGFE+W+RA++++RRYQI+TTNI +SLN+ LK  +DLPV SL +++R+ LQR                                    NP+     
Subjt:  YISNVGFEKWARAHTKERRYQILTTNISKSLNATLKESKDLPVVSLFDSVRQLLQR------------------------------------NPL-----

Query:  -----------------CPC-------------FTVICRLDLNPYSYVSEYYLYSKLLSTYNGSIRHVGNHSDWGFVMIDVIVLPPIIKCPVGRPRKQRI
                         C C               VIC L+LNPY++VS+YY  + L +TY G +R +GNH+DW  V ++  +LPP+ + P  RPRK+RI
Subjt:  -----------------CPC-------------FTVICRLDLNPYSYVSEYYLYSKLLSTYNGSIRHVGNHSDWGFVMIDVIVLPPIIKCPVGRPRKQRI

Query:  PSIGELRKHTRCGHCQRIGHNRRTC
        PSIGE+ K ++C  C+R GHN RTC
Subjt:  PSIGELRKHTRCGHCQRIGHNRRTC

XP_022155934.1 uncharacterized protein LOC111022933 [Momordica charantia]3.7e-4456.02Show/hide
Query:  EYISNVGFEKWARAHTKERRYQILTTNISKSLNATLKESKDLPVVSLFDSVRQLLQR-------------------------------------------
        EY+SNVGFEKWARAHTKER YQ+LTTNIS+SLNATLKES+DLPV SL DS+RQLLQ                                            
Subjt:  EYISNVGFEKWARAHTKERRYQILTTNISKSLNATLKESKDLPVVSLFDSVRQLLQR-------------------------------------------

Query:  -NPLCPC-------------FTVICRLDLNPYSYVSEYYLYSKLLSTYNGSIRHVGNHSDWGFVMIDVIVLPPIIKCPVGRPRKQRIPSIG
         +  C C               VIC  DLNPYSYVSEYYL S+LL TYNGSIR VGNH DWG V IDV VLPPIIKCP GRPRKQRIP IG
Subjt:  -NPLCPC-------------FTVICRLDLNPYSYVSEYYLYSKLLSTYNGSIRHVGNHSDWGFVMIDVIVLPPIIKCPVGRPRKQRIPSIG

XP_022156698.1 uncharacterized protein LOC111023543 [Momordica charantia]3.7e-4460.48Show/hide
Query:  EYISNVGFEKWARAHTKERRYQILTTNISKSLNATLKESKDLPVVSLFDSVRQL-----------------------------LQRNPLCPCFTVICRLD
        EY+SNVGF+KWARAHT ERRYQ+LTTNIS SLNATLKES+DLPV +L DSV  +                             L+  P      VICR+D
Subjt:  EYISNVGFEKWARAHTKERRYQILTTNISKSLNATLKESKDLPVVSLFDSVRQL-----------------------------LQRNPLCPCFTVICRLD

Query:  LNPYSYVSEYYLYSKLLSTYNGSIRHVGNHSDWGFVMIDVIVLPPIIKCPVGRPRKQRIPSIGELRK
        LN YSYVSEYYL S+LL TYNGSIR VGNH DWG V IDV VLPPIIK P  RP+KQRIPSIGE+ K
Subjt:  LNPYSYVSEYYLYSKLLSTYNGSIRHVGNHSDWGFVMIDVIVLPPIIKCPVGRPRKQRIPSIGELRK

XP_038880504.1 uncharacterized protein LOC120072166 [Benincasa hispida]2.9e-3338.5Show/hide
Query:  EYISNVGFEKWARAHTKERRYQILTTNISKSLNATLKESKDLPVVSLFDSVRQLLQR------------------------------------NPL----
        EY++ VGFEKWA AH++ R Y ++TTNIS+ LN  LKE ++ PV SL D +R++LQ                                     +P+    
Subjt:  EYISNVGFEKWARAHTKERRYQILTTNISKSLNATLKESKDLPVVSLFDSVRQLLQR------------------------------------NPL----

Query:  ------------------CPC-------------FTVICRLDLNPYSYVSEYYLYSKLLSTYNGSIRHVGNHSDWGFVMIDVIVLPPIIKCPVGRPRKQR
                          C C               VIC L+L+ Y++V +YY  S LLSTY GS+  +GNHSDW  + + V VLPPI+K PVGRPRKQR
Subjt:  ------------------CPC-------------FTVICRLDLNPYSYVSEYYLYSKLLSTYNGSIRHVGNHSDWGFVMIDVIVLPPIIKCPVGRPRKQR

Query:  IPSIGELRKHTRCGHCQRIGHNRRTC
        I SIGE ++ ++C  C R GHN RTC
Subjt:  IPSIGELRKHTRCGHCQRIGHNRRTC

TrEMBL top hitse value%identityAlignment
A0A1S4DWH2 uncharacterized protein LOC1079908622.2e-3437.33Show/hide
Query:  YISNVGFEKWARAHTKERRYQILTTNISKSLNATLKESKDLPVVSLFDSVRQLLQR------------------------------------NPL-----
        Y+  VGFE+W+RA++++RRYQI+TTNI +SLN+ LK  +DLPV SL +++R+ LQR                                    NP+     
Subjt:  YISNVGFEKWARAHTKERRYQILTTNISKSLNATLKESKDLPVVSLFDSVRQLLQR------------------------------------NPL-----

Query:  -----------------CPC-------------FTVICRLDLNPYSYVSEYYLYSKLLSTYNGSIRHVGNHSDWGFVMIDVIVLPPIIKCPVGRPRKQRI
                         C C               VIC L+LNPY++VS+YY  + L +TY G +R +GNH+DW  V ++  +LPP+ + P  RPRK+RI
Subjt:  -----------------CPC-------------FTVICRLDLNPYSYVSEYYLYSKLLSTYNGSIRHVGNHSDWGFVMIDVIVLPPIIKCPVGRPRKQRI

Query:  PSIGELRKHTRCGHCQRIGHNRRTC
        PSIGE+ K ++C  C+R GHN RTC
Subjt:  PSIGELRKHTRCGHCQRIGHNRRTC

A0A5A7V6N4 SWIM-type domain-containing protein1.9e-3337.33Show/hide
Query:  YISNVGFEKWARAHTKERRYQILTTNISKSLNATLKESKDLPVVSLFDSVRQLLQR------------------------------------NPL-----
        Y+  VGFE+W+ A++++RRYQI+TTNI +SLN+ LK  +DLPV SL +++R+ LQR                                    NP+     
Subjt:  YISNVGFEKWARAHTKERRYQILTTNISKSLNATLKESKDLPVVSLFDSVRQLLQR------------------------------------NPL-----

Query:  -----------------CPC-------------FTVICRLDLNPYSYVSEYYLYSKLLSTYNGSIRHVGNHSDWGFVMIDVIVLPPIIKCPVGRPRKQRI
                         C C               VI  L+LNPY++VS+YY  + L +TY G +R +GNH+DW  V ++  +LPPI + P GRPRK+RI
Subjt:  -----------------CPC-------------FTVICRLDLNPYSYVSEYYLYSKLLSTYNGSIRHVGNHSDWGFVMIDVIVLPPIIKCPVGRPRKQRI

Query:  PSIGELRKHTRCGHCQRIGHNRRTC
        PSIGE+ K ++C  C+R GHN RTC
Subjt:  PSIGELRKHTRCGHCQRIGHNRRTC

A0A5D3BD68 SWIM-type domain-containing protein2.4e-3336.89Show/hide
Query:  YISNVGFEKWARAHTKERRYQILTTNISKSLNATLKESKDLPVVSLFDSVRQLLQR------------------------------------NPL-----
        Y+  VGFE+W+RA++++RRYQI+TTNI +SLN+ LK  +DLPV SL +++R+ LQR                                    NP+     
Subjt:  YISNVGFEKWARAHTKERRYQILTTNISKSLNATLKESKDLPVVSLFDSVRQLLQR------------------------------------NPL-----

Query:  -----------------CPC-------------FTVICRLDLNPYSYVSEYYLYSKLLSTYNGSIRHVGNHSDWGFVMIDVIVLPPIIKCPVGRPRKQRI
                         C C               VI  L+LNPY++VS+YY  + L +TY G +R +GNH+DW  V ++  +LPP+ + P GRPRK+RI
Subjt:  -----------------CPC-------------FTVICRLDLNPYSYVSEYYLYSKLLSTYNGSIRHVGNHSDWGFVMIDVIVLPPIIKCPVGRPRKQRI

Query:  PSIGELRKHTRCGHCQRIGHNRRTC
        PSIGE+ K ++C  C+R  HN RTC
Subjt:  PSIGELRKHTRCGHCQRIGHNRRTC

A0A6J1DRB5 uncharacterized protein LOC1110235431.8e-4460.48Show/hide
Query:  EYISNVGFEKWARAHTKERRYQILTTNISKSLNATLKESKDLPVVSLFDSVRQL-----------------------------LQRNPLCPCFTVICRLD
        EY+SNVGF+KWARAHT ERRYQ+LTTNIS SLNATLKES+DLPV +L DSV  +                             L+  P      VICR+D
Subjt:  EYISNVGFEKWARAHTKERRYQILTTNISKSLNATLKESKDLPVVSLFDSVRQL-----------------------------LQRNPLCPCFTVICRLD

Query:  LNPYSYVSEYYLYSKLLSTYNGSIRHVGNHSDWGFVMIDVIVLPPIIKCPVGRPRKQRIPSIGELRK
        LN YSYVSEYYL S+LL TYNGSIR VGNH DWG V IDV VLPPIIK P  RP+KQRIPSIGE+ K
Subjt:  LNPYSYVSEYYLYSKLLSTYNGSIRHVGNHSDWGFVMIDVIVLPPIIKCPVGRPRKQRIPSIGELRK

A0A6J1DRS7 uncharacterized protein LOC1110229331.8e-4456.02Show/hide
Query:  EYISNVGFEKWARAHTKERRYQILTTNISKSLNATLKESKDLPVVSLFDSVRQLLQR-------------------------------------------
        EY+SNVGFEKWARAHTKER YQ+LTTNIS+SLNATLKES+DLPV SL DS+RQLLQ                                            
Subjt:  EYISNVGFEKWARAHTKERRYQILTTNISKSLNATLKESKDLPVVSLFDSVRQLLQR-------------------------------------------

Query:  -NPLCPC-------------FTVICRLDLNPYSYVSEYYLYSKLLSTYNGSIRHVGNHSDWGFVMIDVIVLPPIIKCPVGRPRKQRIPSIG
         +  C C               VIC  DLNPYSYVSEYYL S+LL TYNGSIR VGNH DWG V IDV VLPPIIKCP GRPRKQRIP IG
Subjt:  -NPLCPC-------------FTVICRLDLNPYSYVSEYYLYSKLLSTYNGSIRHVGNHSDWGFVMIDVIVLPPIIKCPVGRPRKQRIPSIG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAATATATTAGTAATGTTGGATTTGAGAAATGGGCTCGTGCACACACTAAAGAAAGAAGATATCAAATTTTGACAACTAATATTTCTAAGAGCCTCAATGCAACTTTGAA
AGAGTCAAAAGATTTACCTGTTGTATCACTATTTGATTCAGTTAGACAATTACTTCAAAGAAATCCCTTGTGCCCATGTTTTACTGTTATTTGTAGGCTTGATTTGAATC
CTTATTCATATGTGTCTGAGTATTATTTATATAGTAAATTGTTATCTACTTATAATGGTTCAATTCGTCATGTTGGTAACCATTCTGATTGGGGATTTGTAATGATTGAT
GTTATTGTATTACCTCCTATCATTAAATGTCCAGTAGGAAGGCCTCGAAAACAAAGGATTCCTTCAATTGGTGAGTTGAGAAAGCACACAAGATGCGGACATTGTCAGCG
TATTGGACACAATCGTAGAACTTGT
mRNA sequenceShow/hide mRNA sequence
GAATATATTAGTAATGTTGGATTTGAGAAATGGGCTCGTGCACACACTAAAGAAAGAAGATATCAAATTTTGACAACTAATATTTCTAAGAGCCTCAATGCAACTTTGAA
AGAGTCAAAAGATTTACCTGTTGTATCACTATTTGATTCAGTTAGACAATTACTTCAAAGAAATCCCTTGTGCCCATGTTTTACTGTTATTTGTAGGCTTGATTTGAATC
CTTATTCATATGTGTCTGAGTATTATTTATATAGTAAATTGTTATCTACTTATAATGGTTCAATTCGTCATGTTGGTAACCATTCTGATTGGGGATTTGTAATGATTGAT
GTTATTGTATTACCTCCTATCATTAAATGTCCAGTAGGAAGGCCTCGAAAACAAAGGATTCCTTCAATTGGTGAGTTGAGAAAGCACACAAGATGCGGACATTGTCAGCG
TATTGGACACAATCGTAGAACTTGT
Protein sequenceShow/hide protein sequence
EYISNVGFEKWARAHTKERRYQILTTNISKSLNATLKESKDLPVVSLFDSVRQLLQRNPLCPCFTVICRLDLNPYSYVSEYYLYSKLLSTYNGSIRHVGNHSDWGFVMID
VIVLPPIIKCPVGRPRKQRIPSIGELRKHTRCGHCQRIGHNRRTC