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MS015499 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015499
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptioncilia- and flagella-associated protein 251-like
Genome locationscaffold468:294643..294981
RNA-Seq ExpressionMS015499
SyntenyMS015499
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031317.1 uncharacterized protein E6C27_scaffold139G00700 [Cucumis melo var. makuwa]1.6e-0433.64Show/hide
Query:  RETYDSSKVLTLNEEIQEMRSV-----------QRQILGMLTSILEVINDRFPPKSNTEKQSQESLQKNIPPTISFELLDKEVYIDKIVEYATTHEKEDE
        +E+  + ++ +L+E+IQ+++             Q +I+ +L S+ EV+N R   K  +EKQSQE L+KN PP IS E++D +V  +K +E     E++D 
Subjt:  RETYDSSKVLTLNEEIQEMRSV-----------QRQILGMLTSILEVINDRFPPKSNTEKQSQESLQKNIPPTISFELLDKEVYIDKIVEYATTHEKEDE

Query:  DEDEKGK
          + K K
Subjt:  DEDEKGK

KAE8650946.1 hypothetical protein Csa_001290 [Cucumis sativus]1.1e-0539.56Show/hide
Query:  EEIQEMRSVQRQILGMLTSILEVINDRFPPKSNTEKQSQESLQKNIPPTISFELLDKEV--YIDKIVEYATTHEKEDED-EDEKGKEEEAN
        E++  ++  Q +I+ +L S+ EV+N R P K  +EKQS+ESL+KN PP++S E++D ++   ID+ V YAT+  K  E  ++++ KE++ N
Subjt:  EEIQEMRSVQRQILGMLTSILEVINDRFPPKSNTEKQSQESLQKNIPPTISFELLDKEV--YIDKIVEYATTHEKEDED-EDEKGKEEEAN

KAE8651836.1 hypothetical protein Csa_006724 [Cucumis sativus]3.2e-0539.77Show/hide
Query:  EEIQEMRSVQRQILGMLTSILEVINDRFPPKSNTEKQSQESLQKNIPPTISFELLDKEV--YIDKIVEYATTHEKEDEDEDEKGKEEE
        E++  ++  Q +I+ +L S+ EV+N + P K  +EKQS+ESL+KN PP+ S E++D ++   ID+ V YAT+  K+ E  D    EE+
Subjt:  EEIQEMRSVQRQILGMLTSILEVINDRFPPKSNTEKQSQESLQKNIPPTISFELLDKEV--YIDKIVEYATTHEKEDEDEDEKGKEEE

TYK08201.1 40S ribosomal protein S15-4 [Cucumis melo var. makuwa]1.6e-0433.64Show/hide
Query:  RETYDSSKVLTLNEEIQEMRSV-----------QRQILGMLTSILEVINDRFPPKSNTEKQSQESLQKNIPPTISFELLDKEVYIDKIVEYATTHEKEDE
        +E+  + ++ +L+E+IQ+++             Q +I+ +L S+ EV+N R   K  +EKQSQE L+KN PP IS E++D +V  +K +E     E++D 
Subjt:  RETYDSSKVLTLNEEIQEMRSV-----------QRQILGMLTSILEVINDRFPPKSNTEKQSQESLQKNIPPTISFELLDKEVYIDKIVEYATTHEKEDE

Query:  DEDEKGK
          + K K
Subjt:  DEDEKGK

XP_022156699.1 cilia- and flagella-associated protein 251-like [Momordica charantia]1.2e-3174.77Show/hide
Query:  RNIEEEEDRETYDSSKVLTLNEEIQEMRSVQRQILGMLTSILEVINDRFPPKSNTEKQSQESLQKNIPPTISFELLDKEVYIDKIVEYATTHEKEDEDED
        RNIEEEE  ET+ SSK LTL E+IQE+RSVQ+Q+ GMLTSILEVINDRFPPKSN EKQSQESLQKN+PP+ S +LLDKEV IDKIV+YA  HEKED D+D
Subjt:  RNIEEEEDRETYDSSKVLTLNEEIQEMRSVQRQILGMLTSILEVINDRFPPKSNTEKQSQESLQKNIPPTISFELLDKEVYIDKIVEYATTHEKEDEDED

Query:  EKGKEEEANLN
         KGKE+E   N
Subjt:  EKGKEEEANLN

TrEMBL top hitse value%identityAlignment
A0A5A7VDY1 Uncharacterized protein1.3e-0433.64Show/hide
Query:  RETYDSSKVLTLNEEIQEMRSVQR-----------QILGMLTSILEVINDRFPPKSNTEKQSQESLQKNIPPTISFELLDKEVYIDKIVEYATTHEKEDE
        +E+  + ++ +L+E+IQ+++  Q+           +I+ +L S+ EV+N R   K  +EKQSQE L KN PP IS E++D +V  +K +E     E++D 
Subjt:  RETYDSSKVLTLNEEIQEMRSVQR-----------QILGMLTSILEVINDRFPPKSNTEKQSQESLQKNIPPTISFELLDKEVYIDKIVEYATTHEKEDE

Query:  DEDEKGK
          + K K
Subjt:  DEDEKGK

A0A5A7VIA9 Uncharacterized protein7.7e-0533.64Show/hide
Query:  RETYDSSKVLTLNEEIQEMRSV-----------QRQILGMLTSILEVINDRFPPKSNTEKQSQESLQKNIPPTISFELLDKEVYIDKIVEYATTHEKEDE
        +E+  + ++ +L+E+IQ+++             Q +I+ +L S+ EV+N R   K  +EKQSQE L+KN PP IS E++D +V  +K +E     E++D 
Subjt:  RETYDSSKVLTLNEEIQEMRSV-----------QRQILGMLTSILEVINDRFPPKSNTEKQSQESLQKNIPPTISFELLDKEVYIDKIVEYATTHEKEDE

Query:  DEDEKGK
          + K K
Subjt:  DEDEKGK

A0A5D3C8N2 40S ribosomal protein S15-47.7e-0533.64Show/hide
Query:  RETYDSSKVLTLNEEIQEMRSV-----------QRQILGMLTSILEVINDRFPPKSNTEKQSQESLQKNIPPTISFELLDKEVYIDKIVEYATTHEKEDE
        +E+  + ++ +L+E+IQ+++             Q +I+ +L S+ EV+N R   K  +EKQSQE L+KN PP IS E++D +V  +K +E     E++D 
Subjt:  RETYDSSKVLTLNEEIQEMRSV-----------QRQILGMLTSILEVINDRFPPKSNTEKQSQESLQKNIPPTISFELLDKEVYIDKIVEYATTHEKEDE

Query:  DEDEKGK
          + K K
Subjt:  DEDEKGK

A0A5D3DFX6 Uncharacterized protein7.7e-0533.64Show/hide
Query:  RETYDSSKVLTLNEEIQEMRSV-----------QRQILGMLTSILEVINDRFPPKSNTEKQSQESLQKNIPPTISFELLDKEVYIDKIVEYATTHEKEDE
        +E+  + ++ +L+E+IQ+++             Q +I+ +L S+ EV+N R   K  +EKQSQE L+KN PP IS E++D +V  +K +E     E++D 
Subjt:  RETYDSSKVLTLNEEIQEMRSV-----------QRQILGMLTSILEVINDRFPPKSNTEKQSQESLQKNIPPTISFELLDKEVYIDKIVEYATTHEKEDE

Query:  DEDEKGK
          + K K
Subjt:  DEDEKGK

A0A6J1DUB5 cilia- and flagella-associated protein 251-like5.7e-3274.77Show/hide
Query:  RNIEEEEDRETYDSSKVLTLNEEIQEMRSVQRQILGMLTSILEVINDRFPPKSNTEKQSQESLQKNIPPTISFELLDKEVYIDKIVEYATTHEKEDEDED
        RNIEEEE  ET+ SSK LTL E+IQE+RSVQ+Q+ GMLTSILEVINDRFPPKSN EKQSQESLQKN+PP+ S +LLDKEV IDKIV+YA  HEKED D+D
Subjt:  RNIEEEEDRETYDSSKVLTLNEEIQEMRSVQRQILGMLTSILEVINDRFPPKSNTEKQSQESLQKNIPPTISFELLDKEVYIDKIVEYATTHEKEDEDED

Query:  EKGKEEEANLN
         KGKE+E   N
Subjt:  EKGKEEEANLN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAAGAAAGAAATATTGAAGAGGAAGAAGACAGAGAAACATATGATTCAAGTAAAGTCTTAACTTTGAATGAGGAAATACAAGAAATGAGAAGTGTTCAGAGACAAATTTT
GGGGATGTTGACTTCTATATTAGAAGTAATCAATGATAGATTTCCACCAAAGTCTAACACTGAAAAACAATCCCAAGAATCACTTCAGAAGAACATACCTCCAACGATAA
GTTTTGAGCTTCTTGACAAAGAAGTATATATTGATAAAATTGTGGAATATGCAACCACTCATGAGAAAGAGGATGAAGATGAGGATGAGAAAGGAAAAGAAGAAGAGGCA
AATCTAAAT
mRNA sequenceShow/hide mRNA sequence
AAAGAAAGAAATATTGAAGAGGAAGAAGACAGAGAAACATATGATTCAAGTAAAGTCTTAACTTTGAATGAGGAAATACAAGAAATGAGAAGTGTTCAGAGACAAATTTT
GGGGATGTTGACTTCTATATTAGAAGTAATCAATGATAGATTTCCACCAAAGTCTAACACTGAAAAACAATCCCAAGAATCACTTCAGAAGAACATACCTCCAACGATAA
GTTTTGAGCTTCTTGACAAAGAAGTATATATTGATAAAATTGTGGAATATGCAACCACTCATGAGAAAGAGGATGAAGATGAGGATGAGAAAGGAAAAGAAGAAGAGGCA
AATCTAAAT
Protein sequenceShow/hide protein sequence
KERNIEEEEDRETYDSSKVLTLNEEIQEMRSVQRQILGMLTSILEVINDRFPPKSNTEKQSQESLQKNIPPTISFELLDKEVYIDKIVEYATTHEKEDEDEDEKGKEEEA
NLN