; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS015520 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015520
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRibonuclease
Genome locationscaffold300:236316..240122
RNA-Seq ExpressionMS015520
SyntenyMS015520
Gene Ontology termsGO:0006298 - mismatch repair (biological process)
GO:0043137 - DNA replication, removal of RNA primer (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0032299 - ribonuclease H2 complex (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001352 - Ribonuclease HII/HIII
IPR004649 - Ribonuclease H2, subunit A
IPR012337 - Ribonuclease H-like superfamily
IPR023160 - Ribonuclease HII, helix-loop-helix cap domain superfamily
IPR024567 - Ribonuclease HII/HIII domain
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022145114.1 ribonuclease H2 subunit A [Momordica charantia]3.0e-167100Show/hide
Query:  MSSQEPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSLSFADSKTLKEEKREELFENLKANESIGWAVDVIDPRELSSKMLNKVKINLN
        MSSQEPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSLSFADSKTLKEEKREELFENLKANESIGWAVDVIDPRELSSKMLNKVKINLN
Subjt:  MSSQEPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSLSFADSKTLKEEKREELFENLKANESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVSKVLGMGVLLTEVYVDTVGDPEKYRIKLSERFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
        EISHDSAMGLVSKVLGMGVLLTEVYVDTVGDPEKYRIKLSERFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
Subjt:  EISHDSAMGLVSKVLGMGVLLTEVYVDTVGDPEKYRIKLSERFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP

Query:  TTKSWLEDHRHSVFGFPTLVRFSWGTCNPYFKDIVEVSWESDKVDEDGANAGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF
        TTKSWLEDHRHSVFGFPTLVRFSWGTCNPYFKDIVEVSWESDKVDEDGANAGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF
Subjt:  TTKSWLEDHRHSVFGFPTLVRFSWGTCNPYFKDIVEVSWESDKVDEDGANAGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF

XP_022955431.1 ribonuclease H2 subunit A [Cucurbita moschata]4.3e-15893.94Show/hide
Query:  MSSQEPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSLSFADSKTLKEEKREELFENLKANESIGWAVDVIDPRELSSKMLNKVKINLN
        MSSQ+PLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYC  SYL+ELSSL+FADSK LKEEKREELFE LK NESIGWAVDVIDPRELSSKMLNKVKINLN
Subjt:  MSSQEPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSLSFADSKTLKEEKREELFENLKANESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVSKVLGMGVLLTEVYVDTVGDPEKYRIKLSERFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
        EISHDSAMGLV+KVLGMGVLLTEVYVDTVGDPEKYRIKLSE+FPNVKFVVAKKADSLYPVVSGASIVAKVTRDR LR+WALEETAENMHRNFGSGYPGDP
Subjt:  EISHDSAMGLVSKVLGMGVLLTEVYVDTVGDPEKYRIKLSERFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP

Query:  TTKSWLEDHRHSVFGFPTLVRFSWGTCNPYFKDIVEVSWESDKVDEDGANAGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF
        TTK WLEDH+HSVFGFPTLVRFSWGTC  YFKDIVEVSWESDKVDEDGA  GSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF
Subjt:  TTKSWLEDHRHSVFGFPTLVRFSWGTCNPYFKDIVEVSWESDKVDEDGANAGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF

XP_022979887.1 ribonuclease H2 subunit A [Cucurbita maxima]2.5e-15893.94Show/hide
Query:  MSSQEPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSLSFADSKTLKEEKREELFENLKANESIGWAVDVIDPRELSSKMLNKVKINLN
        MSSQ+PLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYC  SYL+ELSSL+FADSKTLKEEKREELFE LKANESIGWAVDVIDPRELSSKMLNKVKINLN
Subjt:  MSSQEPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSLSFADSKTLKEEKREELFENLKANESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVSKVLGMGVLLTEVYVDTVGDPEKYRIKLSERFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
        EISHDSAMGLV+KVLGMGVLLTEVYVDTVGDPEKYRIKLSE+FPNVKFVV+KKADSLYPVVSGASIVAKVTRDR LR+WALEETAENMHRNFGSGYPGDP
Subjt:  EISHDSAMGLVSKVLGMGVLLTEVYVDTVGDPEKYRIKLSERFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP

Query:  TTKSWLEDHRHSVFGFPTLVRFSWGTCNPYFKDIVEVSWESDKVDEDGANAGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF
        TTK WLEDH+HSVFGFP+LVRFSWGTC  YFKDIVEVSWESDKVDEDGA  GSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF
Subjt:  TTKSWLEDHRHSVFGFPTLVRFSWGTCNPYFKDIVEVSWESDKVDEDGANAGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF

XP_023527419.1 ribonuclease H2 subunit A [Cucurbita pepo subsp. pepo]3.9e-15994.61Show/hide
Query:  MSSQEPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSLSFADSKTLKEEKREELFENLKANESIGWAVDVIDPRELSSKMLNKVKINLN
        MSSQ+PLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYC  SYL+ELSSL+FADSKTLKEEKREELFE LKANESIGWAVDVIDPRELSSKMLNKVKINLN
Subjt:  MSSQEPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSLSFADSKTLKEEKREELFENLKANESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVSKVLGMGVLLTEVYVDTVGDPEKYRIKLSERFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
        EISHDSAMGLV+KVLGMGVLLTEVYVDTVGDPEKYRIKLSE+FPNVKFVVAKKADSLYPVVSGASIVAKVTRDR LR+WALEETAENMHRNFGSGYPGDP
Subjt:  EISHDSAMGLVSKVLGMGVLLTEVYVDTVGDPEKYRIKLSERFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP

Query:  TTKSWLEDHRHSVFGFPTLVRFSWGTCNPYFKDIVEVSWESDKVDEDGANAGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF
        TTK WLEDH+HSVFGFPTLVRFSWGTC  YFKDIVEVSWESDKVDEDGA  GSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF
Subjt:  TTKSWLEDHRHSVFGFPTLVRFSWGTCNPYFKDIVEVSWESDKVDEDGANAGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF

XP_038902264.1 ribonuclease H2 subunit A [Benincasa hispida]1.1e-15894.61Show/hide
Query:  MSSQEPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSLSFADSKTLKEEKREELFENLKANESIGWAVDVIDPRELSSKMLNKVKINLN
        MSSQ P+PKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYL+ELSSL+FADSKTLKEEKREELFE+LKANESIGWAVDVIDPRELSSKMLNKVKINLN
Subjt:  MSSQEPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSLSFADSKTLKEEKREELFENLKANESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVSKVLGMGVLLTEVYVDTVGDPEKYRIKLSERFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
        EISHDSAMGLV+KVLG+GVLLTEVYVDTVGDPEKYRIKLSE+FP+VKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
Subjt:  EISHDSAMGLVSKVLGMGVLLTEVYVDTVGDPEKYRIKLSERFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP

Query:  TTKSWLEDHRHSVFGFPTLVRFSWGTCNPYFKDIVEVSWESDKVDEDGANAGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF
        TTK WLEDH+HSVFGFPTLVRFSWGTC  YFKDIVEVSWESDKVDEDGA  GSGKKQLRLS+VGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF
Subjt:  TTKSWLEDHRHSVFGFPTLVRFSWGTCNPYFKDIVEVSWESDKVDEDGANAGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF

TrEMBL top hitse value%identityAlignment
A0A1S3BXP1 Ribonuclease1.1e-15693.27Show/hide
Query:  MSSQEPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSLSFADSKTLKEEKREELFENLKANESIGWAVDVIDPRELSSKMLNKVKINLN
        MS Q+ LPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYL+ELSSL+FADSKTLKEEKREELFE+LKANESIGWAVDVIDPRELSSKMLNKVKINLN
Subjt:  MSSQEPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSLSFADSKTLKEEKREELFENLKANESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVSKVLGMGVLLTEVYVDTVGDPEKYRIKLSERFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
        EISH SAMGLV+KVL MGVLLTEVYVDTVGDPEKYRIKLSE+FPN+KFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
Subjt:  EISHDSAMGLVSKVLGMGVLLTEVYVDTVGDPEKYRIKLSERFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP

Query:  TTKSWLEDHRHSVFGFPTLVRFSWGTCNPYFKDIVEVSWESDKVDEDGANAGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF
        TTK WLEDH+HSVFGFPTLVRFSWGTC  YFKD+VEVSWESDKVDEDGA  GSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQL+ F
Subjt:  TTKSWLEDHRHSVFGFPTLVRFSWGTCNPYFKDIVEVSWESDKVDEDGANAGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF

A0A5A7TT92 Ribonuclease1.1e-15693.27Show/hide
Query:  MSSQEPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSLSFADSKTLKEEKREELFENLKANESIGWAVDVIDPRELSSKMLNKVKINLN
        MS Q+ LPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYL+ELSSL+FADSKTLKEEKREELFE+LKANESIGWAVDVIDPRELSSKMLNKVKINLN
Subjt:  MSSQEPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSLSFADSKTLKEEKREELFENLKANESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVSKVLGMGVLLTEVYVDTVGDPEKYRIKLSERFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
        EISH SAMGLV+KVL MGVLLTEVYVDTVGDPEKYRIKLSE+FPN+KFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
Subjt:  EISHDSAMGLVSKVLGMGVLLTEVYVDTVGDPEKYRIKLSERFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP

Query:  TTKSWLEDHRHSVFGFPTLVRFSWGTCNPYFKDIVEVSWESDKVDEDGANAGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF
        TTK WLEDH+HSVFGFPTLVRFSWGTC  YFKD+VEVSWESDKVDEDGA  GSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQL+ F
Subjt:  TTKSWLEDHRHSVFGFPTLVRFSWGTCNPYFKDIVEVSWESDKVDEDGANAGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF

A0A6J1CU93 Ribonuclease1.4e-167100Show/hide
Query:  MSSQEPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSLSFADSKTLKEEKREELFENLKANESIGWAVDVIDPRELSSKMLNKVKINLN
        MSSQEPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSLSFADSKTLKEEKREELFENLKANESIGWAVDVIDPRELSSKMLNKVKINLN
Subjt:  MSSQEPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSLSFADSKTLKEEKREELFENLKANESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVSKVLGMGVLLTEVYVDTVGDPEKYRIKLSERFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
        EISHDSAMGLVSKVLGMGVLLTEVYVDTVGDPEKYRIKLSERFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
Subjt:  EISHDSAMGLVSKVLGMGVLLTEVYVDTVGDPEKYRIKLSERFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP

Query:  TTKSWLEDHRHSVFGFPTLVRFSWGTCNPYFKDIVEVSWESDKVDEDGANAGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF
        TTKSWLEDHRHSVFGFPTLVRFSWGTCNPYFKDIVEVSWESDKVDEDGANAGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF
Subjt:  TTKSWLEDHRHSVFGFPTLVRFSWGTCNPYFKDIVEVSWESDKVDEDGANAGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF

A0A6J1GTR5 Ribonuclease2.1e-15893.94Show/hide
Query:  MSSQEPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSLSFADSKTLKEEKREELFENLKANESIGWAVDVIDPRELSSKMLNKVKINLN
        MSSQ+PLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYC  SYL+ELSSL+FADSK LKEEKREELFE LK NESIGWAVDVIDPRELSSKMLNKVKINLN
Subjt:  MSSQEPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSLSFADSKTLKEEKREELFENLKANESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVSKVLGMGVLLTEVYVDTVGDPEKYRIKLSERFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
        EISHDSAMGLV+KVLGMGVLLTEVYVDTVGDPEKYRIKLSE+FPNVKFVVAKKADSLYPVVSGASIVAKVTRDR LR+WALEETAENMHRNFGSGYPGDP
Subjt:  EISHDSAMGLVSKVLGMGVLLTEVYVDTVGDPEKYRIKLSERFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP

Query:  TTKSWLEDHRHSVFGFPTLVRFSWGTCNPYFKDIVEVSWESDKVDEDGANAGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF
        TTK WLEDH+HSVFGFPTLVRFSWGTC  YFKDIVEVSWESDKVDEDGA  GSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF
Subjt:  TTKSWLEDHRHSVFGFPTLVRFSWGTCNPYFKDIVEVSWESDKVDEDGANAGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF

A0A6J1IPY0 Ribonuclease1.2e-15893.94Show/hide
Query:  MSSQEPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSLSFADSKTLKEEKREELFENLKANESIGWAVDVIDPRELSSKMLNKVKINLN
        MSSQ+PLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYC  SYL+ELSSL+FADSKTLKEEKREELFE LKANESIGWAVDVIDPRELSSKMLNKVKINLN
Subjt:  MSSQEPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSLSFADSKTLKEEKREELFENLKANESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVSKVLGMGVLLTEVYVDTVGDPEKYRIKLSERFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
        EISHDSAMGLV+KVLGMGVLLTEVYVDTVGDPEKYRIKLSE+FPNVKFVV+KKADSLYPVVSGASIVAKVTRDR LR+WALEETAENMHRNFGSGYPGDP
Subjt:  EISHDSAMGLVSKVLGMGVLLTEVYVDTVGDPEKYRIKLSERFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP

Query:  TTKSWLEDHRHSVFGFPTLVRFSWGTCNPYFKDIVEVSWESDKVDEDGANAGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF
        TTK WLEDH+HSVFGFP+LVRFSWGTC  YFKDIVEVSWESDKVDEDGA  GSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF
Subjt:  TTKSWLEDHRHSVFGFPTLVRFSWGTCNPYFKDIVEVSWESDKVDEDGANAGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF

SwissProt top hitse value%identityAlignment
O75792 Ribonuclease H2 subunit A6.8e-6645.21Show/hide
Query:  PLPKWASK-PCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSLSFADSKTLKEEKREELFENLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISH
        P+P    K PCV+G+DEAGRGPVLGPMVY   YC    L +L +L  ADSKTL E +RE LF  ++  + +GWA+DV+ P  +S+ ML +VK NLN +SH
Subjt:  PLPKWASK-PCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSLSFADSKTLKEEKREELFENLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISH

Query:  DSAMGLVSKVLGMGVLLTEVYVDTVGDPEKYRIKLSERFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTKS
        D+A GL+   L  GV +T+V+VDTVG PE Y+ +L + FP ++  V  KAD+LYPVVS ASI AKV RD+A+++W   E  +++  ++GSGYP DP TK+
Subjt:  DSAMGLVSKVLGMGVLLTEVYVDTVGDPEKYRIKLSERFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTKS

Query:  WLEDHRHSVFGFPTLVRFSWGTCNPYF-KDIVEVSWESDKVDEDGANAGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLT
        WL++H   VFGFP  VRFSW T      K+  +V WE         +A   ++ LR       TS   +E  ++  +   ++F  R LE  T
Subjt:  WLEDHRHSVFGFPTLVRFSWGTCNPYF-KDIVEVSWESDKVDEDGANAGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLT

Q2TBT5 Ribonuclease H2 subunit A3.4e-6546.13Show/hide
Query:  MSSQEPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSLSFADSKTLKEEKREELFENLKAN-ESIGWAVDVIDPRELSSKMLNKVKINL
        +SS  P P    +PCV+G+DEAGRGPVLGPMVY   YC  S LE+L +L  ADSKTL E +R+ LF  ++ + + +GWA+DV+ P  +S+ ML +VK NL
Subjt:  MSSQEPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSLSFADSKTLKEEKREELFENLKAN-ESIGWAVDVIDPRELSSKMLNKVKINL

Query:  NEISHDSAMGLVSKVLGMGVLLTEVYVDTVGDPEKYRIKLSERFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGD
        N +SHD+A GLV   L  GV + +V+VDTVG PE Y+ +L +RFP ++  V  KAD+LYPVVS ASI AKV RD+A++ W   E  +++  ++GSGYP D
Subjt:  NEISHDSAMGLVSKVLGMGVLLTEVYVDTVGDPEKYRIKLSERFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGD

Query:  PTTKSWLEDHRHSVFGFPTLVRFSWGTCNPYFKDIVE-VSWESDKVDEDGANAGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLT
        P TK+WL  H   VFGFP  VRFSW T     +   E V WE     E G   G GK                SE  ++  +   ++FQ R LE  T
Subjt:  PTTKSWLEDHRHSVFGFPTLVRFSWGTCNPYFKDIVE-VSWESDKVDEDGANAGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLT

Q5U209 Ribonuclease H2 subunit A4.7e-6749.2Show/hide
Query:  PLPKWASK-PCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSLSFADSKTLKEEKREELFENLKAN-ESIGWAVDVIDPRELSSKMLNKVKINLNEIS
        P+P    K PCV+G+DEAGRGPVLGPMVY   YC  S L +L +L  ADSKTL E +RE LF  ++ + + +GWA+D++ P  +S+ ML +VK NLN +S
Subjt:  PLPKWASK-PCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSLSFADSKTLKEEKREELFENLKAN-ESIGWAVDVIDPRELSSKMLNKVKINLNEIS

Query:  HDSAMGLVSKVLGMGVLLTEVYVDTVGDPEKYRIKLSERFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTK
        HD+A GL+   +   V +T+V+VDTVG PE Y+ +L +RFP ++  V  KADSL+PVVS ASI+AKV RD+A++ W   E+ + +  ++GSGYP DP TK
Subjt:  HDSAMGLVSKVLGMGVLLTEVYVDTVGDPEKYRIKLSERFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTK

Query:  SWLEDHRHSVFGFPTLVRFSWGTCNPYF-KDIVEVSWESDKVDEDGANAG
        +WL  H   VFGFP  VRFSW T      K+   V+WE    +ED    G
Subjt:  SWLEDHRHSVFGFPTLVRFSWGTCNPYF-KDIVEVSWESDKVDEDGANAG

Q9CWY8 Ribonuclease H2 subunit A1.8e-6649.6Show/hide
Query:  PLPKWASK-PCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSLSFADSKTLKEEKREELFENLKAN-ESIGWAVDVIDPRELSSKMLNKVKINLNEIS
        P+P    K PCV+G+DEAGRGPVLGPMVY   YC  S L +L +L  ADSKTL E +RE LF  ++ + + +GWA+DV+ P  +S+ ML +VK NLN +S
Subjt:  PLPKWASK-PCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSLSFADSKTLKEEKREELFENLKAN-ESIGWAVDVIDPRELSSKMLNKVKINLNEIS

Query:  HDSAMGLVSKVLGMGVLLTEVYVDTVGDPEKYRIKLSERFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTK
        HD+A GL+   L   V +T+V+VDTVG PE Y+ +L + FP ++  V  KADSL+PVVS ASI AKV RD+A++ W   E  +++  ++GSGYP DP TK
Subjt:  HDSAMGLVSKVLGMGVLLTEVYVDTVGDPEKYRIKLSERFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTK

Query:  SWLEDHRHSVFGFPTLVRFSWGTCNPYF-KDIVEVSWESDKVDEDGANAG
        +WL  H   VFGFP  VRFSW T      K+  +V WE  + +ED    G
Subjt:  SWLEDHRHSVFGFPTLVRFSWGTCNPYF-KDIVEVSWESDKVDEDGANAG

Q9SEZ6 Ribonuclease H2 subunit A1.6e-12371.38Show/hide
Query:  MSSQEPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSLSFADSKTLKEEKREELFENLKANESIGWAVDVIDPRELSSKMLNKVKINLN
        M S+   P+WAS+PC+MGIDEAGRGPVLGPMVYGC+YC  SY   L+SL FADSKTLKEEKREEL+E+LK ++S+GWAVDVIDPRELS+KML K K NLN
Subjt:  MSSQEPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSLSFADSKTLKEEKREELFENLKANESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVSKVLGMGVLLTEVYVDTVGDPEKYRIKLSERFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
        EISH+SAMGL+ +VL MGVLLTE Y+DTVGDP+KYRIKLSERFP++KFVV+KKADSL+P+VSGASIVAKVTRDRAL+EW +EET E+++RNFGSGYPGDP
Subjt:  EISHDSAMGLVSKVLGMGVLLTEVYVDTVGDPEKYRIKLSERFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP

Query:  TTKSWLEDHRHSVFGFPTLVRFSWGTCNPYFKDIVEVSWESDKVDEDGANAGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF
         TK+WL  H+HSVFGFP+LVRFSWGTC  + K  VEV+WE+D+ +E G N  S K+Q +LS+ G  T +++SEEIES+ KGRCKF QARK++QLT F
Subjt:  TTKSWLEDHRHSVFGFPTLVRFSWGTCNPYFKDIVEVSWESDKVDEDGANAGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF

Arabidopsis top hitse value%identityAlignment
AT2G25100.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.1e-12471.38Show/hide
Query:  MSSQEPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSLSFADSKTLKEEKREELFENLKANESIGWAVDVIDPRELSSKMLNKVKINLN
        M S+   P+WAS+PC+MGIDEAGRGPVLGPMVYGC+YC  SY   L+SL FADSKTLKEEKREEL+E+LK ++S+GWAVDVIDPRELS+KML K K NLN
Subjt:  MSSQEPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSLSFADSKTLKEEKREELFENLKANESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVSKVLGMGVLLTEVYVDTVGDPEKYRIKLSERFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
        EISH+SAMGL+ +VL MGVLLTE Y+DTVGDP+KYRIKLSERFP++KFVV+KKADSL+P+VSGASIVAKVTRDRAL+EW +EET E+++RNFGSGYPGDP
Subjt:  EISHDSAMGLVSKVLGMGVLLTEVYVDTVGDPEKYRIKLSERFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP

Query:  TTKSWLEDHRHSVFGFPTLVRFSWGTCNPYFKDIVEVSWESDKVDEDGANAGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF
         TK+WL  H+HSVFGFP+LVRFSWGTC  + K  VEV+WE+D+ +E G N  S K+Q +LS+ G  T +++SEEIES+ KGRCKF QARK++QLT F
Subjt:  TTKSWLEDHRHSVFGFPTLVRFSWGTCNPYFKDIVEVSWESDKVDEDGANAGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF

AT2G25100.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein6.9e-11467Show/hide
Query:  MSSQEPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSLSFADSKTLKEEKREELFENLKANESIGWAVDVIDPRELSSKMLNKVKINLN
        M S+   P+WAS+PC+MGIDEAGRGPVLGPMVYGC+YC  SY   L+SL FADSKTLKEEKREEL+E+LK ++S+GWAVDVIDPRELS+KML        
Subjt:  MSSQEPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSLSFADSKTLKEEKREELFENLKANESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVSKVLGMGVLLTEVYVDTVGDPEKYRIKLSERFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
                   +KVL MGVLLTE Y+DTVGDP+KYRIKLSERFP++KFVV+KKADSL+P+VSGASIVAKVTRDRAL+EW +EET E+++RNFGSGYPGDP
Subjt:  EISHDSAMGLVSKVLGMGVLLTEVYVDTVGDPEKYRIKLSERFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP

Query:  TTKSWLEDHRHSVFGFPTLVRFSWGTCNPYFKDIVEVSWESDKVDEDGANAGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF
         TK+WL  H+HSVFGFP+LVRFSWGTC  + K  VEV+WE+D+ +E G N  S K+Q +LS+ G  T +++SEEIES+ KGRCKF QARK++QLT F
Subjt:  TTKSWLEDHRHSVFGFPTLVRFSWGTCNPYFKDIVEVSWESDKVDEDGANAGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCGCAAGAGCCACTCCCCAAATGGGCTTCCAAGCCTTGTGTAATGGGCATCGATGAAGCTGGTCGAGGCCCTGTTTTAGGGCCAATGGTGTATGGATGCCTGTA
CTGCGCTAGTTCCTATTTGGAAGAACTTTCGTCTTTGAGTTTTGCAGACTCAAAAACGCTGAAAGAAGAGAAGAGGGAGGAATTGTTTGAAAATTTGAAGGCTAATGAAT
CAATTGGATGGGCAGTTGATGTCATAGATCCACGGGAGCTATCATCCAAAATGTTAAATAAAGTTAAGATCAACCTAAATGAAATATCGCATGACTCTGCAATGGGTCTT
GTCAGCAAGGTTCTAGGCATGGGAGTTCTTTTAACTGAGGTTTATGTGGATACTGTTGGAGACCCTGAAAAGTACAGAATAAAATTATCTGAAAGATTTCCCAACGTTAA
ATTTGTCGTGGCAAAGAAGGCTGATAGTTTATATCCTGTTGTCAGTGGGGCAAGCATAGTCGCAAAGGTCACAAGAGATCGTGCGTTGCGGGAATGGGCATTAGAAGAAA
CAGCTGAAAACATGCATAGAAATTTTGGTTCTGGATACCCTGGAGATCCAACAACTAAATCTTGGTTAGAAGATCACAGACATTCGGTATTTGGGTTCCCCACATTGGTC
CGCTTCAGTTGGGGTACATGCAATCCATATTTCAAAGACATTGTTGAAGTATCATGGGAATCAGACAAAGTGGATGAAGATGGGGCAAATGCTGGAAGTGGTAAGAAACA
ATTAAGACTAAGCAATGTTGGTATCACCACATCCAAGAGAAAGAGTGAAGAAATTGAATCAAATGCCAAAGGACGCTGCAAGTTTTTCCAGGCTAGAAAACTCGAACAAC
TCACTCACTTT
mRNA sequenceShow/hide mRNA sequence
ATGTCTTCGCAAGAGCCACTCCCCAAATGGGCTTCCAAGCCTTGTGTAATGGGCATCGATGAAGCTGGTCGAGGCCCTGTTTTAGGGCCAATGGTGTATGGATGCCTGTA
CTGCGCTAGTTCCTATTTGGAAGAACTTTCGTCTTTGAGTTTTGCAGACTCAAAAACGCTGAAAGAAGAGAAGAGGGAGGAATTGTTTGAAAATTTGAAGGCTAATGAAT
CAATTGGATGGGCAGTTGATGTCATAGATCCACGGGAGCTATCATCCAAAATGTTAAATAAAGTTAAGATCAACCTAAATGAAATATCGCATGACTCTGCAATGGGTCTT
GTCAGCAAGGTTCTAGGCATGGGAGTTCTTTTAACTGAGGTTTATGTGGATACTGTTGGAGACCCTGAAAAGTACAGAATAAAATTATCTGAAAGATTTCCCAACGTTAA
ATTTGTCGTGGCAAAGAAGGCTGATAGTTTATATCCTGTTGTCAGTGGGGCAAGCATAGTCGCAAAGGTCACAAGAGATCGTGCGTTGCGGGAATGGGCATTAGAAGAAA
CAGCTGAAAACATGCATAGAAATTTTGGTTCTGGATACCCTGGAGATCCAACAACTAAATCTTGGTTAGAAGATCACAGACATTCGGTATTTGGGTTCCCCACATTGGTC
CGCTTCAGTTGGGGTACATGCAATCCATATTTCAAAGACATTGTTGAAGTATCATGGGAATCAGACAAAGTGGATGAAGATGGGGCAAATGCTGGAAGTGGTAAGAAACA
ATTAAGACTAAGCAATGTTGGTATCACCACATCCAAGAGAAAGAGTGAAGAAATTGAATCAAATGCCAAAGGACGCTGCAAGTTTTTCCAGGCTAGAAAACTCGAACAAC
TCACTCACTTT
Protein sequenceShow/hide protein sequence
MSSQEPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSLSFADSKTLKEEKREELFENLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGL
VSKVLGMGVLLTEVYVDTVGDPEKYRIKLSERFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTKSWLEDHRHSVFGFPTLV
RFSWGTCNPYFKDIVEVSWESDKVDEDGANAGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF