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MS015523 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015523
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRibulose bisphosphate carboxylase large chain
Genome locationscaffold300:249143..249259
RNA-Seq ExpressionMS015523
SyntenyMS015523
Gene Ontology termsGO:0009853 - photorespiration (biological process)
GO:0019253 - reductive pentose-phosphate cycle (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0000287 - magnesium ion binding (molecular function)
GO:0004497 - monooxygenase activity (molecular function)
GO:0016984 - ribulose-bisphosphate carboxylase activity (molecular function)
InterPro domainsIPR000685 - Ribulose bisphosphate carboxylase, large subunit, C-terminal
IPR033966 - RuBisCO
IPR036376 - Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AEK34388.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Prunus azorica]2.1e-1292.31Show/hide
Query:  RDNGLLLHIHRAMHVIVDRQKNHGMHFHVLAKALRLSGG
        RDNGLLLHIHRAMH ++DRQKNHGMHFHVLAKALRLSGG
Subjt:  RDNGLLLHIHRAMHVIVDRQKNHGMHFHVLAKALRLSGG
CAA52269.1 ribulose-bisphosphate carboxylase [Physcomitrium patens]1.4e-1192.31Show/hide
Query:  RDNGLLLHIHRAMHVIVDRQKNHGMHFHVLAKALRLSGG
        RDNGLLLHIHRAMH +VDRQKNHGMHF VLAKALRLSGG
Subjt:  RDNGLLLHIHRAMHVIVDRQKNHGMHFHVLAKALRLSGG
KAB2005641.1 hypothetical protein ES319_D11G284700v1 [Gossypium barbadense]1.0e-1189.74Show/hide
Query:  RDNGLLLHIHRAMHVIVDRQKNHGMHFHVLAKALRLSGG
        RDNGLLLHIHRAMHV++DRQKNHGMHF VLAKALR+SGG
Subjt:  RDNGLLLHIHRAMHVIVDRQKNHGMHFHVLAKALRLSGG
KAG6468433.1 hypothetical protein ZIOFF_073118 [Zingiber officinale]1.0e-1189.74Show/hide
Query:  RDNGLLLHIHRAMHVIVDRQKNHGMHFHVLAKALRLSGG
        RDNGLLLHIHRAMHV++DRQKNHGMHF VLAKALR+SGG
Subjt:  RDNGLLLHIHRAMHVIVDRQKNHGMHFHVLAKALRLSGG
MQM23058.1 hypothetical protein [Colocasia esculenta]3.6e-1289.74Show/hide
Query:  RDNGLLLHIHRAMHVIVDRQKNHGMHFHVLAKALRLSGG
        RDNGLLLHIHRAMH ++DRQKNHGMHFHVLAKALR+SGG
Subjt:  RDNGLLLHIHRAMHVIVDRQKNHGMHFHVLAKALRLSGG
TrEMBL top hitse value%identityAlignment
A0A5J5PK77 Ribulose bisphosphate carboxylase large chain5.0e-1289.74Show/hide
Query:  RDNGLLLHIHRAMHVIVDRQKNHGMHFHVLAKALRLSGG
        RDNGLLLHIHRAMHV++DRQKNHGMHF VLAKALR+SGG
Subjt:  RDNGLLLHIHRAMHVIVDRQKNHGMHFHVLAKALRLSGG
A0A6B9JE82 Ribulose-bisphosphate carboxylase (Fragment)8.6e-1289.74Show/hide
Query:  RDNGLLLHIHRAMHVIVDRQKNHGMHFHVLAKALRLSGG
        RDNGLLLHIHRAMH ++DRQKNHGMHF VLAKALRLSGG
Subjt:  RDNGLLLHIHRAMHVIVDRQKNHGMHFHVLAKALRLSGG
G0WZB4 Ribulose bisphosphate carboxylase large chain (Fragment)1.0e-1292.31Show/hide
Query:  RDNGLLLHIHRAMHVIVDRQKNHGMHFHVLAKALRLSGG
        RDNGLLLHIHRAMH ++DRQKNHGMHFHVLAKALRLSGG
Subjt:  RDNGLLLHIHRAMHVIVDRQKNHGMHFHVLAKALRLSGG
H3K366 Ribulose-bisphosphate carboxylase (Fragment)8.6e-1289.74Show/hide
Query:  RDNGLLLHIHRAMHVIVDRQKNHGMHFHVLAKALRLSGG
        RDNGLLLHIHRAMH ++DRQKNHGMHF VLAKALRLSGG
Subjt:  RDNGLLLHIHRAMHVIVDRQKNHGMHFHVLAKALRLSGG
O98354 Ribulose bisphosphate carboxylase large chain (Fragment)6.6e-1292.31Show/hide
Query:  RDNGLLLHIHRAMHVIVDRQKNHGMHFHVLAKALRLSGG
        RDNGLLLHIHRAMH +VDRQKNHGMHF VLAKALRLSGG
Subjt:  RDNGLLLHIHRAMHVIVDRQKNHGMHFHVLAKALRLSGG
SwissProt top hitse value%identityAlignment
A4QJC3 Ribulose bisphosphate carboxylase large chain2.3e-1489.74Show/hide
Query:  RDNGLLLHIHRAMHVIVDRQKNHGMHFHVLAKALRLSGG
        RDNGLLLHIHRAMH ++DRQKNHGMHF VLAKALRLSGG
Subjt:  RDNGLLLHIHRAMHVIVDRQKNHGMHFHVLAKALRLSGG
A4QJK7 Ribulose bisphosphate carboxylase large chain2.3e-1489.74Show/hide
Query:  RDNGLLLHIHRAMHVIVDRQKNHGMHFHVLAKALRLSGG
        RDNGLLLHIHRAMH ++DRQKNHGMHF VLAKALRLSGG
Subjt:  RDNGLLLHIHRAMHVIVDRQKNHGMHFHVLAKALRLSGG
P25826 Ribulose bisphosphate carboxylase large chain2.3e-1489.74Show/hide
Query:  RDNGLLLHIHRAMHVIVDRQKNHGMHFHVLAKALRLSGG
        RDNGLLLHIHRAMH ++DRQKNHGMHF VLAKALRLSGG
Subjt:  RDNGLLLHIHRAMHVIVDRQKNHGMHFHVLAKALRLSGG
Q07209 Ribulose bisphosphate carboxylase large chain (Fragment)2.3e-1489.74Show/hide
Query:  RDNGLLLHIHRAMHVIVDRQKNHGMHFHVLAKALRLSGG
        RDNGLLLHIHRAMH ++DRQKNHGMHF VLAKALRLSGG
Subjt:  RDNGLLLHIHRAMHVIVDRQKNHGMHFHVLAKALRLSGG
Q31655 Ribulose bisphosphate carboxylase large chain (Fragment)2.3e-1489.74Show/hide
Query:  RDNGLLLHIHRAMHVIVDRQKNHGMHFHVLAKALRLSGG
        RDNGLLLHIHRAMH ++DRQKNHGMHF VLAKALRLSGG
Subjt:  RDNGLLLHIHRAMHVIVDRQKNHGMHFHVLAKALRLSGG
Arabidopsis top hitse value%identityAlignment
ATCG00490.1 ribulose-bisphosphate carboxylases1.6e-1589.74Show/hide
Query:  RDNGLLLHIHRAMHVIVDRQKNHGMHFHVLAKALRLSGG
        RDNGLLLHIHRAMH ++DRQKNHGMHF VLAKALRLSGG
Subjt:  RDNGLLLHIHRAMHVIVDRQKNHGMHFHVLAKALRLSGG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CGGGATAATGGTCTACTTCTTCACATTCACCGTGCAATGCATGTCATTGTTGATAGACAGAAGAATCATGGTATGCACTTCCATGTACTAGCTAAAGCATTACGTCTGTC
TGGGGGT
mRNA sequenceShow/hide mRNA sequence
CGGGATAATGGTCTACTTCTTCACATTCACCGTGCAATGCATGTCATTGTTGATAGACAGAAGAATCATGGTATGCACTTCCATGTACTAGCTAAAGCATTACGTCTGTC
TGGGGGT
Protein sequenceShow/hide protein sequence
RDNGLLLHIHRAMHVIVDRQKNHGMHFHVLAKALRLSGG