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MS015527 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015527
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptiontranscription factor SRM1-like
Genome locationscaffold300:277626..277805
RNA-Seq ExpressionMS015527
SyntenyMS015527
Gene Ontology termsGO:0010597 - green leaf volatile biosynthetic process (biological process)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
InterPro domainsIPR001005 - SANT/Myb domain
IPR006447 - Myb domain, plants
IPR009057 - Homeobox-like domain superfamily
IPR017930 - Myb domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KMS97920.1 hypothetical protein BVRB_4g097390 [Beta vulgaris subsp. vulgaris]4.2e-1268.33Show/hide
Query:  RLFLIGLQIYGKGHWKSIATEVVVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTV
        RLFLIGL+ YGKG W+SI+  VVVT+T  QVASHAQK+Y R+ S ++ RKRSSI+DITTV
Subjt:  RLFLIGLQIYGKGHWKSIATEVVVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTV

XP_010695074.1 PREDICTED: transcription factor DIVARICATA [Beta vulgaris subsp. vulgaris]4.2e-1268.33Show/hide
Query:  RLFLIGLQIYGKGHWKSIATEVVVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTV
        RLFLIGL+ YGKG W+SI+  VVVT+T  QVASHAQK+Y R+ S ++ RKRSSI+DITTV
Subjt:  RLFLIGLQIYGKGHWKSIATEVVVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTV

XP_021730551.1 transcription factor SRM1-like [Chenopodium quinoa]4.2e-1268.33Show/hide
Query:  RLFLIGLQIYGKGHWKSIATEVVVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTV
        RLFLIGL+ YGKG W+SI+  VVVT+T  QVASHAQK+Y R+ S ++ RKRSSI+DITTV
Subjt:  RLFLIGLQIYGKGHWKSIATEVVVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTV

XP_021856464.1 transcription factor DIVARICATA-like [Spinacia oleracea]4.2e-1268.33Show/hide
Query:  RLFLIGLQIYGKGHWKSIATEVVVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTV
        RLFLIGL+ YGKG W+SI+  VVVT+T  QVASHAQK+Y R+ S ++ RKRSSI+DITTV
Subjt:  RLFLIGLQIYGKGHWKSIATEVVVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTV

XP_022145143.1 transcription factor SRM1-like [Momordica charantia]1.3e-2196.67Show/hide
Query:  RLFLIGLQIYGKGHWKSIATEVVVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTV
        +LFLIGLQIYGKGHWKSIATEV VTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTV
Subjt:  RLFLIGLQIYGKGHWKSIATEVVVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTV

TrEMBL top hitse value%identityAlignment
A0A0J8E475 Uncharacterized protein2.0e-1268.33Show/hide
Query:  RLFLIGLQIYGKGHWKSIATEVVVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTV
        RLFLIGL+ YGKG W+SI+  VVVT+T  QVASHAQK+Y R+ S ++ RKRSSI+DITTV
Subjt:  RLFLIGLQIYGKGHWKSIATEVVVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTV

A0A0K9Q782 Uncharacterized protein2.0e-1268.33Show/hide
Query:  RLFLIGLQIYGKGHWKSIATEVVVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTV
        RLFLIGL+ YGKG W+SI+  VVVT+T  QVASHAQK+Y R+ S ++ RKRSSI+DITTV
Subjt:  RLFLIGLQIYGKGHWKSIATEVVVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTV

A0A6J1CV56 transcription factor SRM1-like6.3e-2296.67Show/hide
Query:  RLFLIGLQIYGKGHWKSIATEVVVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTV
        +LFLIGLQIYGKGHWKSIATEV VTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTV
Subjt:  RLFLIGLQIYGKGHWKSIATEVVVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTV

A0A7C8ZAH3 Uncharacterized protein2.0e-1268.33Show/hide
Query:  RLFLIGLQIYGKGHWKSIATEVVVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTV
        RLFLIGL+ YGKG W+SI+  VVVT+T  QVASHAQK+Y R+ S ++ RKRSSI+DITTV
Subjt:  RLFLIGLQIYGKGHWKSIATEVVVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTV

A0A803N8C1 Uncharacterized protein2.0e-1268.33Show/hide
Query:  RLFLIGLQIYGKGHWKSIATEVVVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTV
        RLFLIGL+ YGKG W+SI+  VVVT+T  QVASHAQK+Y R+ S ++ RKRSSI+DITTV
Subjt:  RLFLIGLQIYGKGHWKSIATEVVVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTV

SwissProt top hitse value%identityAlignment
B8A9B2 Transcription factor MYBS14.8e-1155Show/hide
Query:  RLFLIGLQIYGKGHWKSIATEVVVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTV
        RLFL+GL  +GKG W+SI+   V+++T  QVASHAQK++ R  S  + R+RSSI+DIT+V
Subjt:  RLFLIGLQIYGKGHWKSIATEVVVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTV

Q2V9B0 Transcription factor MYB1R11.6e-0952.54Show/hide
Query:  RLFLIGLQIYGKGHWKSIATEVVVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITT
        +LFL+GLQ  GKG W+ I+   V T+T  QVASHAQK++ R+ +  + R+RSS+ DITT
Subjt:  RLFLIGLQIYGKGHWKSIATEVVVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITT

Q8LH59 Transcription factor MYBS14.8e-1155Show/hide
Query:  RLFLIGLQIYGKGHWKSIATEVVVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTV
        RLFL+GL  +GKG W+SI+   V+++T  QVASHAQK++ R  S  + R+RSSI+DIT+V
Subjt:  RLFLIGLQIYGKGHWKSIATEVVVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTV

Q8S9H7 Transcription factor DIVARICATA4.4e-1255Show/hide
Query:  RLFLIGLQIYGKGHWKSIATEVVVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTV
        +LFL+GL+ YGKG W++I+   V+T+T  QVASHAQK++ R+LS  + ++R+SI+DITTV
Subjt:  RLFLIGLQIYGKGHWKSIATEVVVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTV

Q9FNN6 Transcription factor SRM14.4e-1260Show/hide
Query:  RLFLIGLQIYGKGHWKSIATEVVVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTV
        RLFL+GL  YGKG W+SI+   VVT+T  QVASHAQK++ R  S  + R+RSSI+DIT+V
Subjt:  RLFLIGLQIYGKGHWKSIATEVVVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTV

Arabidopsis top hitse value%identityAlignment
AT3G11280.1 Duplicated homeodomain-like superfamily protein9.0e-1357.63Show/hide
Query:  RLFLIGLQIYGKGHWKSIATEVVVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITT
        R FL+GL  YGKG W++I+   VV+KT  QVASHAQK+Y R+LS  + ++R SI+DITT
Subjt:  RLFLIGLQIYGKGHWKSIATEVVVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITT

AT3G11280.2 Duplicated homeodomain-like superfamily protein9.0e-1357.63Show/hide
Query:  RLFLIGLQIYGKGHWKSIATEVVVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITT
        R FL+GL  YGKG W++I+   VV+KT  QVASHAQK+Y R+LS  + ++R SI+DITT
Subjt:  RLFLIGLQIYGKGHWKSIATEVVVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITT

AT5G04760.1 Duplicated homeodomain-like superfamily protein5.6e-1565Show/hide
Query:  RLFLIGLQIYGKGHWKSIATEVVVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTV
        +LFLIGL+ YGKG W+SI+  VVVT+T  QVASHAQK++ R+ S ++ RKRSSI+DITTV
Subjt:  RLFLIGLQIYGKGHWKSIATEVVVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTV

AT5G08520.1 Duplicated homeodomain-like superfamily protein3.1e-1360Show/hide
Query:  RLFLIGLQIYGKGHWKSIATEVVVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTV
        RLFL+GL  YGKG W+SI+   VVT+T  QVASHAQK++ R  S  + R+RSSI+DIT+V
Subjt:  RLFLIGLQIYGKGHWKSIATEVVVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTV

AT5G58900.1 Homeodomain-like transcriptional regulator3.1e-1355Show/hide
Query:  RLFLIGLQIYGKGHWKSIATEVVVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTV
        +LFL+GL+ YGKG W++I+   V+T+T  QVASHAQK++ R+LS  + ++R+SI+DITTV
Subjt:  RLFLIGLQIYGKGHWKSIATEVVVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGGCTATTTTTGATTGGACTGCAAATATATGGGAAAGGACATTGGAAAAGCATTGCAACGGAAGTTGTTGTGACAAAAACAGCGGCCCAAGTGGCCAGTCATGCCCAGAA
GTTCTACAGCCGTAAACTTTCATCGGAGCAAAGTCGGAAGAGGTCGAGTATTAACGATATCACCACCGTA
mRNA sequenceShow/hide mRNA sequence
AGGCTATTTTTGATTGGACTGCAAATATATGGGAAAGGACATTGGAAAAGCATTGCAACGGAAGTTGTTGTGACAAAAACAGCGGCCCAAGTGGCCAGTCATGCCCAGAA
GTTCTACAGCCGTAAACTTTCATCGGAGCAAAGTCGGAAGAGGTCGAGTATTAACGATATCACCACCGTA
Protein sequenceShow/hide protein sequence
RLFLIGLQIYGKGHWKSIATEVVVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTV