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MS015529 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015529
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionHomeodomain-like superfamily protein
Genome locationscaffold300:303408..303521
RNA-Seq ExpressionMS015529
SyntenyMS015529
Gene Ontology termsGO:0009739 - response to gibberellin (biological process)
GO:0009751 - response to salicylic acid (biological process)
GO:0010597 - green leaf volatile biosynthetic process (biological process)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
InterPro domainsIPR001005 - SANT/Myb domain
IPR006447 - Myb domain, plants
IPR009057 - Homeobox-like domain superfamily
IPR017930 - Myb domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3775933.1 Transcription factor DIVARICATA [Nymphaea thermarum]4.9e-0673.68Show/hide
Query:  RLFLLGEEKYGKGNWKEISTKMAVTKTSTQVTSHAQKY
        RLFLLG EKYGKG+W+ IS  + VTKT TQV SHAQKY
Subjt:  RLFLLGEEKYGKGNWKEISTKMAVTKTSTQVTSHAQKY

KAF3795572.1 Transcription factor DIVARICATA [Nymphaea thermarum]4.9e-0673.68Show/hide
Query:  RLFLLGEEKYGKGNWKEISTKMAVTKTSTQVTSHAQKY
        RLFLLG EKYGKG+W+ IS  + VTKT TQV SHAQKY
Subjt:  RLFLLGEEKYGKGNWKEISTKMAVTKTSTQVTSHAQKY

XP_022145130.1 transcription factor DIVARICATA-like [Momordica charantia]1.3e-0675.68Show/hide
Query:  LFLLGEEKYGKGNWKEISTKMAVTKTSTQVTSHAQKY
        LFL+G EKYG GNWKEI+T+  VT+TSTQV SHAQKY
Subjt:  LFLLGEEKYGKGNWKEISTKMAVTKTSTQVTSHAQKY

XP_022145147.1 uncharacterized protein LOC111014661 [Momordica charantia]3.8e-11100Show/hide
Query:  LFLLGEEKYGKGNWKEISTKMAVTKTSTQVTSHAQKY
        LFLLGEEKYGKGNWKEISTKMAVTKTSTQVTSHAQKY
Subjt:  LFLLGEEKYGKGNWKEISTKMAVTKTSTQVTSHAQKY

XP_031487947.1 transcription factor DIVARICATA-like [Nymphaea colorata]4.9e-0673.68Show/hide
Query:  RLFLLGEEKYGKGNWKEISTKMAVTKTSTQVTSHAQKY
        RLFLLG EKYGKG+W+ IS  + VTKT TQV SHAQKY
Subjt:  RLFLLGEEKYGKGNWKEISTKMAVTKTSTQVTSHAQKY

TrEMBL top hitse value%identityAlignment
A0A072TS07 Myb-like transcription factor family protein4.0e-0671.05Show/hide
Query:  RLFLLGEEKYGKGNWKEISTKMAVTKTSTQVTSHAQKY
        RLFL+G EKYGKG WK+IS    VTKT TQ+ SHAQKY
Subjt:  RLFLLGEEKYGKGNWKEISTKMAVTKTSTQVTSHAQKY

A0A396GRL8 Putative transcription factor MYB/SANT family4.0e-0671.05Show/hide
Query:  RLFLLGEEKYGKGNWKEISTKMAVTKTSTQVTSHAQKY
        RLFL+G EKYGKG WK+IS    VTKT TQ+ SHAQKY
Subjt:  RLFLLGEEKYGKGNWKEISTKMAVTKTSTQVTSHAQKY

A0A6A2ZN51 Transcription factor DIVARICATA6.8e-0671.05Show/hide
Query:  RLFLLGEEKYGKGNWKEISTKMAVTKTSTQVTSHAQKY
        RLFLLG  KYGKG+W+ IS  + VT+TSTQV SHAQKY
Subjt:  RLFLLGEEKYGKGNWKEISTKMAVTKTSTQVTSHAQKY

A0A6J1CTL3 transcription factor DIVARICATA-like6.2e-0775.68Show/hide
Query:  LFLLGEEKYGKGNWKEISTKMAVTKTSTQVTSHAQKY
        LFL+G EKYG GNWKEI+T+  VT+TSTQV SHAQKY
Subjt:  LFLLGEEKYGKGNWKEISTKMAVTKTSTQVTSHAQKY

A0A6J1CVN6 uncharacterized protein LOC1110146611.9e-11100Show/hide
Query:  LFLLGEEKYGKGNWKEISTKMAVTKTSTQVTSHAQKY
        LFLLGEEKYGKGNWKEISTKMAVTKTSTQVTSHAQKY
Subjt:  LFLLGEEKYGKGNWKEISTKMAVTKTSTQVTSHAQKY

SwissProt top hitse value%identityAlignment
B8A9B2 Transcription factor MYBS16.0e-0760.53Show/hide
Query:  RLFLLGEEKYGKGNWKEISTKMAVTKTSTQVTSHAQKY
        RLFLLG +K+GKG+W+ IS    +++T TQV SHAQKY
Subjt:  RLFLLGEEKYGKGNWKEISTKMAVTKTSTQVTSHAQKY

Q8LH59 Transcription factor MYBS16.0e-0760.53Show/hide
Query:  RLFLLGEEKYGKGNWKEISTKMAVTKTSTQVTSHAQKY
        RLFLLG +K+GKG+W+ IS    +++T TQV SHAQKY
Subjt:  RLFLLGEEKYGKGNWKEISTKMAVTKTSTQVTSHAQKY

Q8S9H7 Transcription factor DIVARICATA3.5e-0760.53Show/hide
Query:  RLFLLGEEKYGKGNWKEISTKMAVTKTSTQVTSHAQKY
        +LFL+G +KYGKG+W+ IS    +T+T TQV SHAQKY
Subjt:  RLFLLGEEKYGKGNWKEISTKMAVTKTSTQVTSHAQKY

Q9FNN6 Transcription factor SRM15.4e-0868.42Show/hide
Query:  RLFLLGEEKYGKGNWKEISTKMAVTKTSTQVTSHAQKY
        RLFLLG +KYGKG+W+ IS    VT+T TQV SHAQKY
Subjt:  RLFLLGEEKYGKGNWKEISTKMAVTKTSTQVTSHAQKY

Q9LVS0 Transcription factor KUA15.0e-0660.53Show/hide
Query:  RLFLLGEEKYGKGNWKEISTKMAVTKTSTQVTSHAQKY
        R+FLLG +K GKG+W+ IS     T+T TQV SHAQKY
Subjt:  RLFLLGEEKYGKGNWKEISTKMAVTKTSTQVTSHAQKY

Arabidopsis top hitse value%identityAlignment
AT1G49010.1 Duplicated homeodomain-like superfamily protein4.2e-0860.53Show/hide
Query:  RLFLLGEEKYGKGNWKEISTKMAVTKTSTQVTSHAQKY
        RLFLLG +K+GKG+W+ IS    +++T TQV SHAQKY
Subjt:  RLFLLGEEKYGKGNWKEISTKMAVTKTSTQVTSHAQKY

AT5G04760.1 Duplicated homeodomain-like superfamily protein3.2e-0860.53Show/hide
Query:  RLFLLGEEKYGKGNWKEISTKMAVTKTSTQVTSHAQKY
        +LFL+G ++YGKG+W+ IS  + VT+T TQV SHAQKY
Subjt:  RLFLLGEEKYGKGNWKEISTKMAVTKTSTQVTSHAQKY

AT5G08520.1 Duplicated homeodomain-like superfamily protein3.8e-0968.42Show/hide
Query:  RLFLLGEEKYGKGNWKEISTKMAVTKTSTQVTSHAQKY
        RLFLLG +KYGKG+W+ IS    VT+T TQV SHAQKY
Subjt:  RLFLLGEEKYGKGNWKEISTKMAVTKTSTQVTSHAQKY

AT5G23650.1 Homeodomain-like transcriptional regulator7.2e-0865.79Show/hide
Query:  RLFLLGEEKYGKGNWKEISTKMAVTKTSTQVTSHAQKY
        R FL G +KYGKG+W+ IS    VT+TSTQV SHAQKY
Subjt:  RLFLLGEEKYGKGNWKEISTKMAVTKTSTQVTSHAQKY

AT5G58900.1 Homeodomain-like transcriptional regulator2.5e-0860.53Show/hide
Query:  RLFLLGEEKYGKGNWKEISTKMAVTKTSTQVTSHAQKY
        +LFL+G +KYGKG+W+ IS    +T+T TQV SHAQKY
Subjt:  RLFLLGEEKYGKGNWKEISTKMAVTKTSTQVTSHAQKY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGGTTATTTTTATTGGGGGAGGAGAAGTATGGGAAAGGAAACTGGAAAGAAATTTCCACAAAAATGGCGGTCACAAAAACATCTACCCAGGTGACCAGCCATGCCCAAAA
GTAC
mRNA sequenceShow/hide mRNA sequence
AGGTTATTTTTATTGGGGGAGGAGAAGTATGGGAAAGGAAACTGGAAAGAAATTTCCACAAAAATGGCGGTCACAAAAACATCTACCCAGGTGACCAGCCATGCCCAAAA
GTAC
Protein sequenceShow/hide protein sequence
RLFLLGEEKYGKGNWKEISTKMAVTKTSTQVTSHAQKY