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MS015531 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015531
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionzinc finger protein CONSTANS-LIKE 14-like
Genome locationscaffold300:364903..365367
RNA-Seq ExpressionMS015531
SyntenyMS015531
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044555.1 zinc finger protein CONSTANS-LIKE 15-like [Cucumis melo var. makuwa]1.1e-4361.78Show/hide
Query:  ICDNCSSGPVSISCSSTVKLVICYECDWDAHRSCLISTAYNQTPIEGFSGCSSMLELVLFLGFGLGDKKLEESKMLVQNGDCSKGLMKPVDSSACKASAT
        ICDNC S PVSI C ST  LV+C ECDWDAH SC +S A+++TPIEGF+GC S LELV   GF LGDKKLEES+MLVQN  CS+ L+ P+DS A +ASAT
Subjt:  ICDNCSSGPVSISCSSTVKLVICYECDWDAHRSCLISTAYNQTPIEGFSGCSSMLELVLFLGFGLGDKKLEESKMLVQNGDCSKGLMKPVDSSACKASAT

Query:  AFHELVVPNENVFIFTNLNCNFASMLKINQSSSGRKH-----KQFVELLKQDFEGSE
        AF++L+VPN+N F+F NLNC  A+ +   QS S  KH     KQ VELLK+DFEG +
Subjt:  AFHELVVPNENVFIFTNLNCNFASMLKINQSSSGRKH-----KQFVELLKQDFEGSE

XP_004152125.1 zinc finger protein CONSTANS-LIKE 14 [Cucumis sativus]1.1e-4361.78Show/hide
Query:  ICDNCSSGPVSISCSSTVKLVICYECDWDAHRSCLISTAYNQTPIEGFSGCSSMLELVLFLGFGLGDKKLEESKMLVQNGDCSKGLMKPVDSSACKASAT
        ICDNC S PVSI C ST  LV+C ECDWDAH SC +S A+++TPIEGF+GC S LELV   GF LGDKKLEES+MLVQN  CS+ L+ P+DS A +ASAT
Subjt:  ICDNCSSGPVSISCSSTVKLVICYECDWDAHRSCLISTAYNQTPIEGFSGCSSMLELVLFLGFGLGDKKLEESKMLVQNGDCSKGLMKPVDSSACKASAT

Query:  AFHELVVPNENVFIFTNLNCNFASMLKINQSSSGRKH-----KQFVELLKQDFEGSE
        AF++L+VPN+N F+F NLNC  A+ +   QS S  KH     KQ VELLK+DFEG +
Subjt:  AFHELVVPNENVFIFTNLNCNFASMLKINQSSSGRKH-----KQFVELLKQDFEGSE

XP_008454034.1 PREDICTED: zinc finger protein CONSTANS-LIKE 15-like [Cucumis melo]1.1e-4361.78Show/hide
Query:  ICDNCSSGPVSISCSSTVKLVICYECDWDAHRSCLISTAYNQTPIEGFSGCSSMLELVLFLGFGLGDKKLEESKMLVQNGDCSKGLMKPVDSSACKASAT
        ICDNC S PVSI C ST  LV+C ECDWDAH SC +S A+++TPIEGF+GC S LELV   GF LGDKKLEES+MLVQN  CS+ L+ P+DS A +ASAT
Subjt:  ICDNCSSGPVSISCSSTVKLVICYECDWDAHRSCLISTAYNQTPIEGFSGCSSMLELVLFLGFGLGDKKLEESKMLVQNGDCSKGLMKPVDSSACKASAT

Query:  AFHELVVPNENVFIFTNLNCNFASMLKINQSSSGRKH-----KQFVELLKQDFEGSE
        AF++L+VPN+N F+F NLNC  A+ +   QS S  KH     KQ VELLK+DFEG +
Subjt:  AFHELVVPNENVFIFTNLNCNFASMLKINQSSSGRKH-----KQFVELLKQDFEGSE

XP_022145217.1 zinc finger protein CONSTANS-LIKE 14-like [Momordica charantia]3.0e-4663.69Show/hide
Query:  ICDNCSSGPVSISCSSTVKLVICYECDWDAHRSCLISTAYNQTPIEGFSGCSSMLELVLFLGFGLGDKKLEESKMLVQNGDCSKGLMKPVDSSACKASAT
        ICDNCSS PVS+ C ST  LV+C ECDWDAH SC +S A+++ PIEGFSGC S LELV   GF LGDKKLEES+MLVQN  CS+ L+ PVDS AC+A+AT
Subjt:  ICDNCSSGPVSISCSSTVKLVICYECDWDAHRSCLISTAYNQTPIEGFSGCSSMLELVLFLGFGLGDKKLEESKMLVQNGDCSKGLMKPVDSSACKASAT

Query:  AFHELVVPNENVFIFTNLNCNFASMLKINQSSSGRKH-----KQFVELLKQDFEGSE
        AFH+L+VPNEN F+F NL+C  A+ +   QS S  KH     KQ VELLK+DFEG E
Subjt:  AFHELVVPNENVFIFTNLNCNFASMLKINQSSSGRKH-----KQFVELLKQDFEGSE

XP_038877051.1 zinc finger protein CONSTANS-LIKE 15-like [Benincasa hispida]3.1e-4361.15Show/hide
Query:  ICDNCSSGPVSISCSSTVKLVICYECDWDAHRSCLISTAYNQTPIEGFSGCSSMLELVLFLGFGLGDKKLEESKMLVQNGDCSKGLMKPVDSSACKASAT
        ICDNC S PVSI C ST  LV+C ECDWDAH SC +S A+++TPIEGF+GC S LELV   GF LGDKKLEES+MLVQN  CS+ L+ P+DS A + SAT
Subjt:  ICDNCSSGPVSISCSSTVKLVICYECDWDAHRSCLISTAYNQTPIEGFSGCSSMLELVLFLGFGLGDKKLEESKMLVQNGDCSKGLMKPVDSSACKASAT

Query:  AFHELVVPNENVFIFTNLNCNFASMLKINQSSSGRKH-----KQFVELLKQDFEGSE
        AF++L+VPN+N F+F NLNC  A+ +   QS S  KH     KQ VELLK+DFEG +
Subjt:  AFHELVVPNENVFIFTNLNCNFASMLKINQSSSGRKH-----KQFVELLKQDFEGSE

TrEMBL top hitse value%identityAlignment
A0A0A0KU41 Uncharacterized protein5.1e-4461.78Show/hide
Query:  ICDNCSSGPVSISCSSTVKLVICYECDWDAHRSCLISTAYNQTPIEGFSGCSSMLELVLFLGFGLGDKKLEESKMLVQNGDCSKGLMKPVDSSACKASAT
        ICDNC S PVSI C ST  LV+C ECDWDAH SC +S A+++TPIEGF+GC S LELV   GF LGDKKLEES+MLVQN  CS+ L+ P+DS A +ASAT
Subjt:  ICDNCSSGPVSISCSSTVKLVICYECDWDAHRSCLISTAYNQTPIEGFSGCSSMLELVLFLGFGLGDKKLEESKMLVQNGDCSKGLMKPVDSSACKASAT

Query:  AFHELVVPNENVFIFTNLNCNFASMLKINQSSSGRKH-----KQFVELLKQDFEGSE
        AF++L+VPN+N F+F NLNC  A+ +   QS S  KH     KQ VELLK+DFEG +
Subjt:  AFHELVVPNENVFIFTNLNCNFASMLKINQSSSGRKH-----KQFVELLKQDFEGSE

A0A1S3BYW6 zinc finger protein CONSTANS-LIKE 15-like5.1e-4461.78Show/hide
Query:  ICDNCSSGPVSISCSSTVKLVICYECDWDAHRSCLISTAYNQTPIEGFSGCSSMLELVLFLGFGLGDKKLEESKMLVQNGDCSKGLMKPVDSSACKASAT
        ICDNC S PVSI C ST  LV+C ECDWDAH SC +S A+++TPIEGF+GC S LELV   GF LGDKKLEES+MLVQN  CS+ L+ P+DS A +ASAT
Subjt:  ICDNCSSGPVSISCSSTVKLVICYECDWDAHRSCLISTAYNQTPIEGFSGCSSMLELVLFLGFGLGDKKLEESKMLVQNGDCSKGLMKPVDSSACKASAT

Query:  AFHELVVPNENVFIFTNLNCNFASMLKINQSSSGRKH-----KQFVELLKQDFEGSE
        AF++L+VPN+N F+F NLNC  A+ +   QS S  KH     KQ VELLK+DFEG +
Subjt:  AFHELVVPNENVFIFTNLNCNFASMLKINQSSSGRKH-----KQFVELLKQDFEGSE

A0A5A7TT60 Zinc finger protein CONSTANS-LIKE 15-like5.1e-4461.78Show/hide
Query:  ICDNCSSGPVSISCSSTVKLVICYECDWDAHRSCLISTAYNQTPIEGFSGCSSMLELVLFLGFGLGDKKLEESKMLVQNGDCSKGLMKPVDSSACKASAT
        ICDNC S PVSI C ST  LV+C ECDWDAH SC +S A+++TPIEGF+GC S LELV   GF LGDKKLEES+MLVQN  CS+ L+ P+DS A +ASAT
Subjt:  ICDNCSSGPVSISCSSTVKLVICYECDWDAHRSCLISTAYNQTPIEGFSGCSSMLELVLFLGFGLGDKKLEESKMLVQNGDCSKGLMKPVDSSACKASAT

Query:  AFHELVVPNENVFIFTNLNCNFASMLKINQSSSGRKH-----KQFVELLKQDFEGSE
        AF++L+VPN+N F+F NLNC  A+ +   QS S  KH     KQ VELLK+DFEG +
Subjt:  AFHELVVPNENVFIFTNLNCNFASMLKINQSSSGRKH-----KQFVELLKQDFEGSE

A0A5D3D2L9 Zinc finger protein CONSTANS-LIKE 15-like5.1e-4461.78Show/hide
Query:  ICDNCSSGPVSISCSSTVKLVICYECDWDAHRSCLISTAYNQTPIEGFSGCSSMLELVLFLGFGLGDKKLEESKMLVQNGDCSKGLMKPVDSSACKASAT
        ICDNC S PVSI C ST  LV+C ECDWDAH SC +S A+++TPIEGF+GC S LELV   GF LGDKKLEES+MLVQN  CS+ L+ P+DS A +ASAT
Subjt:  ICDNCSSGPVSISCSSTVKLVICYECDWDAHRSCLISTAYNQTPIEGFSGCSSMLELVLFLGFGLGDKKLEESKMLVQNGDCSKGLMKPVDSSACKASAT

Query:  AFHELVVPNENVFIFTNLNCNFASMLKINQSSSGRKH-----KQFVELLKQDFEGSE
        AF++L+VPN+N F+F NLNC  A+ +   QS S  KH     KQ VELLK+DFEG +
Subjt:  AFHELVVPNENVFIFTNLNCNFASMLKINQSSSGRKH-----KQFVELLKQDFEGSE

A0A6J1CVZ2 zinc finger protein CONSTANS-LIKE 14-like1.4e-4663.69Show/hide
Query:  ICDNCSSGPVSISCSSTVKLVICYECDWDAHRSCLISTAYNQTPIEGFSGCSSMLELVLFLGFGLGDKKLEESKMLVQNGDCSKGLMKPVDSSACKASAT
        ICDNCSS PVS+ C ST  LV+C ECDWDAH SC +S A+++ PIEGFSGC S LELV   GF LGDKKLEES+MLVQN  CS+ L+ PVDS AC+A+AT
Subjt:  ICDNCSSGPVSISCSSTVKLVICYECDWDAHRSCLISTAYNQTPIEGFSGCSSMLELVLFLGFGLGDKKLEESKMLVQNGDCSKGLMKPVDSSACKASAT

Query:  AFHELVVPNENVFIFTNLNCNFASMLKINQSSSGRKH-----KQFVELLKQDFEGSE
        AFH+L+VPNEN F+F NL+C  A+ +   QS S  KH     KQ VELLK+DFEG E
Subjt:  AFHELVVPNENVFIFTNLNCNFASMLKINQSSSGRKH-----KQFVELLKQDFEGSE

SwissProt top hitse value%identityAlignment
O22800 Zinc finger protein CONSTANS-LIKE 148.2e-1541.67Show/hide
Query:  ICDNCSSGPVSISCSSTVKLVICYECDWDAHRSCLISTAYNQTPIEGFSGCSSMLELVLFLGFGLGDKKLEESKMLVQNGDCSKGLMKPVDSSACKASAT
        ICDNCS  PVS+ C  T  LV+C ECDWD H SC  S  + ++ +EGFSGC S+LEL    G  L  KK E+ +      + +K     +DS    + + 
Subjt:  ICDNCSSGPVSISCSSTVKLVICYECDWDAHRSCLISTAYNQTPIEGFSGCSSMLELVLFLGFGLGDKKLEESKMLVQNGDCSKGLMKPVDSSACKASAT

Query:  AFHELVVP
           EL+VP
Subjt:  AFHELVVP

O82256 Zinc finger protein CONSTANS-LIKE 138.2e-0738.71Show/hide
Query:  ICDNCSSGPVSISCSSTVKLVICYECDWDAHRSCLISTAYNQTPIEGFSGCSSMLELVLFLG
        +CD+C+  P S+ C  T + V+C  CDW  H +   S+ +++ P EGF+GC S+ EL+  +G
Subjt:  ICDNCSSGPVSISCSSTVKLVICYECDWDAHRSCLISTAYNQTPIEGFSGCSSMLELVLFLG

Q9C7E8 Zinc finger protein CONSTANS-LIKE 155.3e-1434.62Show/hide
Query:  ICDNCSSGPVSISCSSTVKLVICYECDWDAHRSCLISTAYNQTPIEGFSGCSSMLELVLFLGFGLGDKKLEESKMLVQNGDCSKGLMKPVDSSACKASAT
        ICDNC + PVS+ C  T  L++C ECDWD H SC +S A+ ++ +EGFSGC S LEL    G  L   + +E   +             +DS    +   
Subjt:  ICDNCSSGPVSISCSSTVKLVICYECDWDAHRSCLISTAYNQTPIEGFSGCSSMLELVLFLGFGLGDKKLEESKMLVQNGDCSKGLMKPVDSSACKASAT

Query:  AFHELVVPNENVFIFTNLNCNFASMLKINQSSSGRKH----KQFVELLKQDFEGSE
          +EL+VP++  F     +C          SS GR      KQ  ELLK    G +
Subjt:  AFHELVVPNENVFIFTNLNCNFASMLKINQSSSGRKH----KQFVELLKQDFEGSE

Arabidopsis top hitse value%identityAlignment
AT1G28050.1 B-box type zinc finger protein with CCT domain3.8e-1534.62Show/hide
Query:  ICDNCSSGPVSISCSSTVKLVICYECDWDAHRSCLISTAYNQTPIEGFSGCSSMLELVLFLGFGLGDKKLEESKMLVQNGDCSKGLMKPVDSSACKASAT
        ICDNC + PVS+ C  T  L++C ECDWD H SC +S A+ ++ +EGFSGC S LEL    G  L   + +E   +             +DS    +   
Subjt:  ICDNCSSGPVSISCSSTVKLVICYECDWDAHRSCLISTAYNQTPIEGFSGCSSMLELVLFLGFGLGDKKLEESKMLVQNGDCSKGLMKPVDSSACKASAT

Query:  AFHELVVPNENVFIFTNLNCNFASMLKINQSSSGRKH----KQFVELLKQDFEGSE
          +EL+VP++  F     +C          SS GR      KQ  ELLK    G +
Subjt:  AFHELVVPNENVFIFTNLNCNFASMLKINQSSSGRKH----KQFVELLKQDFEGSE

AT2G33500.1 B-box type zinc finger protein with CCT domain5.8e-1641.67Show/hide
Query:  ICDNCSSGPVSISCSSTVKLVICYECDWDAHRSCLISTAYNQTPIEGFSGCSSMLELVLFLGFGLGDKKLEESKMLVQNGDCSKGLMKPVDSSACKASAT
        ICDNCS  PVS+ C  T  LV+C ECDWD H SC  S  + ++ +EGFSGC S+LEL    G  L  KK E+ +      + +K     +DS    + + 
Subjt:  ICDNCSSGPVSISCSSTVKLVICYECDWDAHRSCLISTAYNQTPIEGFSGCSSMLELVLFLGFGLGDKKLEESKMLVQNGDCSKGLMKPVDSSACKASAT

Query:  AFHELVVP
           EL+VP
Subjt:  AFHELVVP

AT2G33500.2 B-box type zinc finger protein with CCT domain5.8e-1641.67Show/hide
Query:  ICDNCSSGPVSISCSSTVKLVICYECDWDAHRSCLISTAYNQTPIEGFSGCSSMLELVLFLGFGLGDKKLEESKMLVQNGDCSKGLMKPVDSSACKASAT
        ICDNCS  PVS+ C  T  LV+C ECDWD H SC  S  + ++ +EGFSGC S+LEL    G  L  KK E+ +      + +K     +DS    + + 
Subjt:  ICDNCSSGPVSISCSSTVKLVICYECDWDAHRSCLISTAYNQTPIEGFSGCSSMLELVLFLGFGLGDKKLEESKMLVQNGDCSKGLMKPVDSSACKASAT

Query:  AFHELVVP
           EL+VP
Subjt:  AFHELVVP

AT2G47890.1 B-box type zinc finger protein with CCT domain5.8e-0838.71Show/hide
Query:  ICDNCSSGPVSISCSSTVKLVICYECDWDAHRSCLISTAYNQTPIEGFSGCSSMLELVLFLG
        +CD+C+  P S+ C  T + V+C  CDW  H +   S+ +++ P EGF+GC S+ EL+  +G
Subjt:  ICDNCSSGPVSISCSSTVKLVICYECDWDAHRSCLISTAYNQTPIEGFSGCSSMLELVLFLG

AT2G47890.2 B-box type zinc finger protein with CCT domain5.8e-0838.71Show/hide
Query:  ICDNCSSGPVSISCSSTVKLVICYECDWDAHRSCLISTAYNQTPIEGFSGCSSMLELVLFLG
        +CD+C+  P S+ C  T + V+C  CDW  H +   S+ +++ P EGF+GC S+ EL+  +G
Subjt:  ICDNCSSGPVSISCSSTVKLVICYECDWDAHRSCLISTAYNQTPIEGFSGCSSMLELVLFLG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATCTGTGATAATTGTAGCTCTGGGCCGGTTTCGATTAGTTGTTCCAGTACAGTTAAATTGGTGATTTGTTACGAGTGTGATTGGGATGCCCATAGGAGTTGTTTGATCTC
CACCGCATACAATCAAACTCCAATTGAGGGCTTCTCCGGATGCTCCTCTATGCTTGAGCTCGTTTTGTTTTTAGGCTTCGGTCTTGGGGATAAGAAGCTGGAGGAATCCA
AGATGTTGGTACAGAATGGGGACTGTTCGAAAGGTTTGATGAAGCCAGTGGATTCTTCGGCATGTAAGGCGAGTGCAACTGCTTTCCACGAACTCGTTGTTCCAAATGAG
AACGTCTTTATTTTCACAAATCTCAACTGTAATTTTGCTTCGATGCTGAAGATCAATCAGAGTTCGAGTGGTAGGAAGCACAAGCAGTTTGTTGAGCTACTTAAGCAGGA
TTTTGAAGGCAGTGAG
mRNA sequenceShow/hide mRNA sequence
ATCTGTGATAATTGTAGCTCTGGGCCGGTTTCGATTAGTTGTTCCAGTACAGTTAAATTGGTGATTTGTTACGAGTGTGATTGGGATGCCCATAGGAGTTGTTTGATCTC
CACCGCATACAATCAAACTCCAATTGAGGGCTTCTCCGGATGCTCCTCTATGCTTGAGCTCGTTTTGTTTTTAGGCTTCGGTCTTGGGGATAAGAAGCTGGAGGAATCCA
AGATGTTGGTACAGAATGGGGACTGTTCGAAAGGTTTGATGAAGCCAGTGGATTCTTCGGCATGTAAGGCGAGTGCAACTGCTTTCCACGAACTCGTTGTTCCAAATGAG
AACGTCTTTATTTTCACAAATCTCAACTGTAATTTTGCTTCGATGCTGAAGATCAATCAGAGTTCGAGTGGTAGGAAGCACAAGCAGTTTGTTGAGCTACTTAAGCAGGA
TTTTGAAGGCAGTGAG
Protein sequenceShow/hide protein sequence
ICDNCSSGPVSISCSSTVKLVICYECDWDAHRSCLISTAYNQTPIEGFSGCSSMLELVLFLGFGLGDKKLEESKMLVQNGDCSKGLMKPVDSSACKASATAFHELVVPNE
NVFIFTNLNCNFASMLKINQSSSGRKHKQFVELLKQDFEGSE