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MS015532 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS015532
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptiontranscription factor DIVARICATA-like
Genome locationscaffold300:367677..367886
RNA-Seq ExpressionMS015532
SyntenyMS015532
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
InterPro domainsIPR001005 - SANT/Myb domain
IPR006447 - Myb domain, plants
IPR009057 - Homeobox-like domain superfamily
IPR017930 - Myb domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KMS97920.1 hypothetical protein BVRB_4g097390 [Beta vulgaris subsp. vulgaris]5.4e-1155.71Show/hide
Query:  RLFVIGIEMYGKGNWKDIATKLVVTKTSTQVASHAQKYYDYHQNPNSNSRQRNGKNGRSKSSIFEITTID
        RLF+IG+E YGKG+W+ I+  +VVT+T TQVASHAQKYY          RQ +GK  R +SSI +ITT+D
Subjt:  RLFVIGIEMYGKGNWKDIATKLVVTKTSTQVASHAQKYYDYHQNPNSNSRQRNGKNGRSKSSIFEITTID
XP_010695074.1 PREDICTED: transcription factor DIVARICATA [Beta vulgaris subsp. vulgaris]5.4e-1155.71Show/hide
Query:  RLFVIGIEMYGKGNWKDIATKLVVTKTSTQVASHAQKYYDYHQNPNSNSRQRNGKNGRSKSSIFEITTID
        RLF+IG+E YGKG+W+ I+  +VVT+T TQVASHAQKYY          RQ +GK  R +SSI +ITT+D
Subjt:  RLFVIGIEMYGKGNWKDIATKLVVTKTSTQVASHAQKYYDYHQNPNSNSRQRNGKNGRSKSSIFEITTID
XP_021856464.1 transcription factor DIVARICATA-like [Spinacia oleracea]5.4e-1155.71Show/hide
Query:  RLFVIGIEMYGKGNWKDIATKLVVTKTSTQVASHAQKYYDYHQNPNSNSRQRNGKNGRSKSSIFEITTID
        RLF+IG+E YGKG+W+ I+  +VVT+T TQVASHAQKYY          RQ +GK  R +SSI +ITT+D
Subjt:  RLFVIGIEMYGKGNWKDIATKLVVTKTSTQVASHAQKYYDYHQNPNSNSRQRNGKNGRSKSSIFEITTID
XP_022145130.1 transcription factor DIVARICATA-like [Momordica charantia]2.3e-1771.01Show/hide
Query:  LFVIGIEMYGKGNWKDIATKLVVTKTSTQVASHAQKYYDYHQNPNSNSRQRNGKNGRSKSSIFEITTID
        LF++G+E YG GNWK+IAT+ VVT+TSTQVASHAQKY  Y QNPN N  QRNGK+ RSKSSIF+IT +D
Subjt:  LFVIGIEMYGKGNWKDIATKLVVTKTSTQVASHAQKYYDYHQNPNSNSRQRNGKNGRSKSSIFEITTID
XP_022145147.1 uncharacterized protein LOC111014661 [Momordica charantia]1.1e-1669.57Show/hide
Query:  LFVIGIEMYGKGNWKDIATKLVVTKTSTQVASHAQKYYDYHQNPNSNSRQRNGKNGRSKSSIFEITTID
        LF++G E YGKGNWK+I+TK+ VTKTSTQV SHAQKY+ Y+QNP  NS+QRNGK+  SKSSIF IT +D
Subjt:  LFVIGIEMYGKGNWKDIATKLVVTKTSTQVASHAQKYYDYHQNPNSNSRQRNGKNGRSKSSIFEITTID
TrEMBL top hitse value%identityAlignment
A0A0J8E475 Uncharacterized protein2.6e-1155.71Show/hide
Query:  RLFVIGIEMYGKGNWKDIATKLVVTKTSTQVASHAQKYYDYHQNPNSNSRQRNGKNGRSKSSIFEITTID
        RLF+IG+E YGKG+W+ I+  +VVT+T TQVASHAQKYY          RQ +GK  R +SSI +ITT+D
Subjt:  RLFVIGIEMYGKGNWKDIATKLVVTKTSTQVASHAQKYYDYHQNPNSNSRQRNGKNGRSKSSIFEITTID
A0A0K9Q782 Uncharacterized protein2.6e-1155.71Show/hide
Query:  RLFVIGIEMYGKGNWKDIATKLVVTKTSTQVASHAQKYYDYHQNPNSNSRQRNGKNGRSKSSIFEITTID
        RLF+IG+E YGKG+W+ I+  +VVT+T TQVASHAQKYY          RQ +GK  R +SSI +ITT+D
Subjt:  RLFVIGIEMYGKGNWKDIATKLVVTKTSTQVASHAQKYYDYHQNPNSNSRQRNGKNGRSKSSIFEITTID
A0A6J1CTL3 transcription factor DIVARICATA-like1.1e-1771.01Show/hide
Query:  LFVIGIEMYGKGNWKDIATKLVVTKTSTQVASHAQKYYDYHQNPNSNSRQRNGKNGRSKSSIFEITTID
        LF++G+E YG GNWK+IAT+ VVT+TSTQVASHAQKY  Y QNPN N  QRNGK+ RSKSSIF+IT +D
Subjt:  LFVIGIEMYGKGNWKDIATKLVVTKTSTQVASHAQKYYDYHQNPNSNSRQRNGKNGRSKSSIFEITTID
A0A6J1CVN6 uncharacterized protein LOC1110146615.5e-1769.57Show/hide
Query:  LFVIGIEMYGKGNWKDIATKLVVTKTSTQVASHAQKYYDYHQNPNSNSRQRNGKNGRSKSSIFEITTID
        LF++G E YGKGNWK+I+TK+ VTKTSTQV SHAQKY+ Y+QNP  NS+QRNGK+  SKSSIF IT +D
Subjt:  LFVIGIEMYGKGNWKDIATKLVVTKTSTQVASHAQKYYDYHQNPNSNSRQRNGKNGRSKSSIFEITTID
A0A803N8C1 Uncharacterized protein2.6e-1155.71Show/hide
Query:  RLFVIGIEMYGKGNWKDIATKLVVTKTSTQVASHAQKYYDYHQNPNSNSRQRNGKNGRSKSSIFEITTID
        RLF+IG+E YGKG+W+ I+  +VVT+T TQVASHAQKYY          RQ +GK  R +SSI +ITT+D
Subjt:  RLFVIGIEMYGKGNWKDIATKLVVTKTSTQVASHAQKYYDYHQNPNSNSRQRNGKNGRSKSSIFEITTID
SwissProt top hitse value%identityAlignment
B8A9B2 Transcription factor MYBS13.4e-0843.48Show/hide
Query:  RLFVIGIEMYGKGNWKDIATKLVVTKTSTQVASHAQKYYDYHQNPNSNSRQRNGKNGRSKSSIFEITTI
        RLF++G++ +GKG+W+ I+   V+++T TQVASHAQKY+        NS  R+    R +SSI +IT++
Subjt:  RLFVIGIEMYGKGNWKDIATKLVVTKTSTQVASHAQKYYDYHQNPNSNSRQRNGKNGRSKSSIFEITTI
Q2V9B0 Transcription factor MYB1R12.6e-0844.12Show/hide
Query:  RLFVIGIEMYGKGNWKDIATKLVVTKTSTQVASHAQKYYDYHQNPNSNSRQRNGKNGRSKSSIFEITT
        +LF++G++  GKG+W+ I+   V T+T TQVASHAQKY+          R+ N    R +SS+F+ITT
Subjt:  RLFVIGIEMYGKGNWKDIATKLVVTKTSTQVASHAQKYYDYHQNPNSNSRQRNGKNGRSKSSIFEITT
Q8LH59 Transcription factor MYBS13.4e-0843.48Show/hide
Query:  RLFVIGIEMYGKGNWKDIATKLVVTKTSTQVASHAQKYYDYHQNPNSNSRQRNGKNGRSKSSIFEITTI
        RLF++G++ +GKG+W+ I+   V+++T TQVASHAQKY+        NS  R+    R +SSI +IT++
Subjt:  RLFVIGIEMYGKGNWKDIATKLVVTKTSTQVASHAQKYYDYHQNPNSNSRQRNGKNGRSKSSIFEITTI
Q8S9H7 Transcription factor DIVARICATA8.1e-1042.86Show/hide
Query:  RLFVIGIEMYGKGNWKDIATKLVVTKTSTQVASHAQKYYDYHQNPNSNSRQRNGKNGRSKSSIFEITTID
        +LF++G++ YGKG+W++I+   V+T+T TQVASHAQKY+          RQ +G   + ++SI +ITT++
Subjt:  RLFVIGIEMYGKGNWKDIATKLVVTKTSTQVASHAQKYYDYHQNPNSNSRQRNGKNGRSKSSIFEITTID
Q9FNN6 Transcription factor SRM14.0e-0944.93Show/hide
Query:  RLFVIGIEMYGKGNWKDIATKLVVTKTSTQVASHAQKYYDYHQNPNSNSRQRNGKNGRSKSSIFEITTI
        RLF++G++ YGKG+W+ I+   VVT+T TQVASHAQKY+          R  +    R +SSI +IT++
Subjt:  RLFVIGIEMYGKGNWKDIATKLVVTKTSTQVASHAQKYYDYHQNPNSNSRQRNGKNGRSKSSIFEITTI
Arabidopsis top hitse value%identityAlignment
AT2G38090.1 Duplicated homeodomain-like superfamily protein2.0e-1147.14Show/hide
Query:  RLFVIGIEMYGKGNWKDIATKLVVTKTSTQVASHAQKYYDYHQNPNSNSRQRNGKNGRSKSSIFEITTID
        R F++G++ YGKG+W++IA   V T+T TQVASHAQKY+          RQ NG   + +SSI +ITT++
Subjt:  RLFVIGIEMYGKGNWKDIATKLVVTKTSTQVASHAQKYYDYHQNPNSNSRQRNGKNGRSKSSIFEITTID
AT3G11280.1 Duplicated homeodomain-like superfamily protein2.2e-1047.06Show/hide
Query:  RLFVIGIEMYGKGNWKDIATKLVVTKTSTQVASHAQKYYDYHQNPNSNSRQRNGKNGRSKSSIFEITT
        R F++G+  YGKG+W++I+   VV+KT TQVASHAQKYY          RQ +G   + + SI +ITT
Subjt:  RLFVIGIEMYGKGNWKDIATKLVVTKTSTQVASHAQKYYDYHQNPNSNSRQRNGKNGRSKSSIFEITT
AT3G11280.2 Duplicated homeodomain-like superfamily protein2.2e-1047.06Show/hide
Query:  RLFVIGIEMYGKGNWKDIATKLVVTKTSTQVASHAQKYYDYHQNPNSNSRQRNGKNGRSKSSIFEITT
        R F++G+  YGKG+W++I+   VV+KT TQVASHAQKYY          RQ +G   + + SI +ITT
Subjt:  RLFVIGIEMYGKGNWKDIATKLVVTKTSTQVASHAQKYYDYHQNPNSNSRQRNGKNGRSKSSIFEITT
AT5G04760.1 Duplicated homeodomain-like superfamily protein1.1e-1250Show/hide
Query:  RLFVIGIEMYGKGNWKDIATKLVVTKTSTQVASHAQKYYDYHQNPNSNSRQRNGKNGRSKSSIFEITTID
        +LF+IG++ YGKG+W+ I+  +VVT+T TQVASHAQKY+          RQ + K  R +SSI +ITT+D
Subjt:  RLFVIGIEMYGKGNWKDIATKLVVTKTSTQVASHAQKYYDYHQNPNSNSRQRNGKNGRSKSSIFEITTID
AT5G58900.1 Homeodomain-like transcriptional regulator5.8e-1142.86Show/hide
Query:  RLFVIGIEMYGKGNWKDIATKLVVTKTSTQVASHAQKYYDYHQNPNSNSRQRNGKNGRSKSSIFEITTID
        +LF++G++ YGKG+W++I+   V+T+T TQVASHAQKY+          RQ +G   + ++SI +ITT++
Subjt:  RLFVIGIEMYGKGNWKDIATKLVVTKTSTQVASHAQKYYDYHQNPNSNSRQRNGKNGRSKSSIFEITTID

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGGTTATTTGTGATTGGAATTGAGATGTATGGAAAAGGAAATTGGAAAGATATTGCGACAAAATTGGTGGTGACAAAAACATCCACACAGGTGGCAAGTCATGCCCAAAA
GTACTATGACTATCACCAAAACCCTAATTCTAATTCAAGACAGCGAAATGGGAAGAATGGCAGGTCCAAGTCTAGTATTTTCGAGATCACCACCATAGAT
mRNA sequenceShow/hide mRNA sequence
AGGTTATTTGTGATTGGAATTGAGATGTATGGAAAAGGAAATTGGAAAGATATTGCGACAAAATTGGTGGTGACAAAAACATCCACACAGGTGGCAAGTCATGCCCAAAA
GTACTATGACTATCACCAAAACCCTAATTCTAATTCAAGACAGCGAAATGGGAAGAATGGCAGGTCCAAGTCTAGTATTTTCGAGATCACCACCATAGAT
Protein sequenceShow/hide protein sequence
RLFVIGIEMYGKGNWKDIATKLVVTKTSTQVASHAQKYYDYHQNPNSNSRQRNGKNGRSKSSIFEITTID